G229130


Basic Information

Item Value
gene id G229130
gene name NA
gene type non-coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053134.1
NCBI id CM020931.1
chromosome length 29109922
location 20607232 ~ 20607530 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>TU310845
atttaattgtaagaGAGTGCCTTACACATGATAAAaggacatcaaatacaatcgaggataaaaacacaataaagtccaagacttatttccattgtggtcctcaacaCACATCAGGACAAGACAAGATACTTAATTGACAtaacatgaaaacatttttcttaaataaataaaaatagtaacTTGCCCTTTAATCTATTCCGCAACCCTCTCTAGTAACCAGACCTTGATGCTCTTTTTAAAAGAGTTCAGGCTGGAAATGACTTTAATATGACGATCTAACTTGTTCCACTGAACTGCCC

Function

GO: NA

KEGG:

id description
ko00350 Tyrosine metabolism
ko04916 Melanogenesis
ko04744 Phototransduction

RNA

RNA id representative length rna type GC content exon number start site end site
TU310845 True 299 lncRNA 0.34 1 20607232 20607530

Neighbor

gene id symbol gene type direction distance location
fbxo18 NA coding upstream 4053 20570988 ~ 20603179 (+)
nudt5 nudt5 coding upstream 36672 20565597 ~ 20570560 (+)
ccdc3a ccdc3,LOC102778083 coding upstream 172684 20422837 ~ 20434548 (+)
LOC120553582 phyh coding upstream 230884 20364803 ~ 20376348 (+)
LOC120553583 phyh coding upstream 244712 20355616 ~ 20362520 (+)
rbm17 rbm17 coding downstream 35377 20642907 ~ 20655914 (+)
pfkfb3 pfkfb3,LOC102775874,LOC104933238 coding downstream 70519 20678049 ~ 20689946 (+)
ntf3 ntf3 coding downstream 208589 20816119 ~ 20864618 (+)
LOC120553788 NA coding downstream 289689 20897219 ~ 20906821 (+)
LOC120553657 LOC103369066 coding downstream 440407 21047937 ~ 21059082 (+)
G229108 cdc123,LOC102776001 non-coding upstream 42052 20563063 ~ 20565180 (+)
G229060 NA non-coding upstream 152444 20442667 ~ 20454788 (+)
G229058 NA non-coding upstream 158675 20439458 ~ 20448557 (+)
G228989 NA non-coding upstream 305791 20298734 ~ 20301441 (+)
LOC120553527 NA non-coding upstream 685378 19921100 ~ 19921854 (+)
G229182 NA non-coding downstream 316418 20923948 ~ 20925059 (+)
G229205 NA non-coding downstream 430418 21037948 ~ 21062435 (+)
G229233 NA non-coding downstream 612918 21220448 ~ 21220812 (+)
G229263 NA non-coding downstream 656866 21264396 ~ 21264699 (+)
G229264 NA non-coding downstream 657882 21265412 ~ 21271111 (+)
ucmaa NA other upstream 215826 20382393 ~ 20391406 (+)
LOC120553418 NA other upstream 382047 20190928 ~ 20225185 (+)
LOC120553749 NA other upstream 433825 20147078 ~ 20173407 (+)
G228924 NA other upstream 621584 19982248 ~ 19985648 (+)
LOC120553104 LOC103364246,LOC103152567,LOC106913527,LOC103459763,LOC103459764,LOC106945279 other upstream 701280 19852928 ~ 19905952 (+)
LOC120553023 LOC106946322,LOC103151516,LOC104922640 other downstream 540737 21148267 ~ 21150351 (+)
arid2 arid2 other downstream 769342 21376872 ~ 21429238 (+)
G229423 NA other downstream 1230392 21837922 ~ 21847020 (+)
G229425 NA other downstream 1241681 21849211 ~ 21850601 (+)
G229422 NA other downstream 1250453 21857983 ~ 21859209 (+)

Expression


Co-expression Network