G229182


Basic Information

Item Value
gene id G229182
gene name NA
gene type non-coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053134.1
NCBI id CM020931.1
chromosome length 29109922
location 20923948 ~ 20925059 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>TU310915
TTTCACAGTACATCATATGACGAAAAAAGCACGTTTAATGTGTTGCACATTGCTTTTTCAAAAGCATCTACCTAAAGCACTGCTATCAGTTGCTTTAAAACTAAAGATGGATTTTCTGCCCAGAACACTGAATATAGATgctgttttttggtttttttaaagcatcaatcagCTACTCATTCATGATGGTTCTTATCCATATTCTATATCAGGATAGAGACTCCCAGTTCTAACCATTCTTGACTGAATGCAATATATCCTGCATTAAAATGACAACCATCCAATGTGATATCACTCCTTCCATGGTACCTTACAGATTTCAACTTGGACACACTAACTGGACAAAAGCCGTACATAATGTAGAAATTACTTTTGCCAAATATCAGCATAAACCAATGGTCCGTTTCAAAGCGCTTTGTGTGACGGAGCGGTCAGAAGTTAAACCAGAAGATAGACATTTAAAGATGTATGTGGGGATCAGTGCTAAGGTTAGCAAGCTAGGGTAATTAGCTTCCTCttcctgggggaaaaaaagctagTCACTTTAGCTTGCTGGCTTCCACTTCTgagtaaaaaacacatttaatagCATGGGTCATTCTAAATATTGAGTGTTATACAGGGAAACATGTCTAACCGTAGTTAATCAATACTATGTGGGCTTGCTGAGAATGCAAGGAAAAACATCTTGCATTTATGTTCGTAGGCTACAGGGCTATAACGTGGTCCAATAAGTAGCGCACCACGGAGATAGGTTGACAGTGTATCTCCTAGCAACGCAAGCTCCAAAATGTCAGTCAACCGCTGcctaaagagaacaggacaaaaTTGACTTGATCGTTTTCTTGAAAAATGGAAGATTATGCACATCAGCAGCAGTATCTTTATAGCTTATATTTCCTTGCACAAAAAGTGAAAATTCAATTTTCAGTTTGACTTTAACATGCAAAAGCTAACTTAATTAGTATGCTAATTATTTGTTTACTCTACAGCAATAGTTGGACCAGATAGAAGGGCtatgttagcaagctaacaagCTATTAGCTATCTAAACATATATCCATCAGATCTATCAGTGATGAAAGGACAGATTCTCAGCAGTCAGAAACAGA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU310915 True 1112 lncRNA 0.38 1 20923948 20925059

Neighbor

gene id symbol gene type direction distance location
LOC120553788 NA coding upstream 17127 20897219 ~ 20906821 (+)
ntf3 ntf3 coding upstream 59330 20816119 ~ 20864618 (+)
pfkfb3 pfkfb3,LOC102775874,LOC104933238 coding upstream 234002 20678049 ~ 20689946 (+)
rbm17 rbm17 coding upstream 268034 20642907 ~ 20655914 (+)
fbxo18 NA coding upstream 320769 20570988 ~ 20603179 (+)
LOC120553657 LOC103369066 coding downstream 122878 21047937 ~ 21059082 (+)
zgc:162331 LOC104922672,LOC101475914,LOC102301200,LOC102199861,LOC102799838,LOC101071909,LOC104956107,LOC100698522 coding downstream 258827 21183886 ~ 21219226 (+)
fgfr1op2 fgfr1op2 coding downstream 376361 21301420 ~ 21304922 (+)
tm7sf3 tm7sf3,LOC108229002 coding downstream 380555 21305614 ~ 21326282 (+)
scaf11 NA coding downstream 508522 21433581 ~ 21452526 (+)
G229130 NA non-coding upstream 316418 20607232 ~ 20607530 (+)
G229108 cdc123,LOC102776001 non-coding upstream 358768 20563063 ~ 20565180 (+)
G229060 NA non-coding upstream 469160 20442667 ~ 20454788 (+)
G229058 NA non-coding upstream 475391 20439458 ~ 20448557 (+)
G228989 NA non-coding upstream 622507 20298734 ~ 20301441 (+)
G229205 NA non-coding downstream 112889 21037948 ~ 21062435 (+)
G229233 NA non-coding downstream 295389 21220448 ~ 21220812 (+)
G229263 NA non-coding downstream 339337 21264396 ~ 21264699 (+)
G229264 NA non-coding downstream 340353 21265412 ~ 21271111 (+)
G229352 NA non-coding downstream 578585 21503644 ~ 21613229 (+)
ucmaa NA other upstream 532542 20382393 ~ 20391406 (+)
LOC120553418 NA other upstream 698763 20190928 ~ 20225185 (+)
LOC120553749 NA other upstream 750541 20147078 ~ 20173407 (+)
G228924 NA other upstream 938300 19982248 ~ 19985648 (+)
LOC120553104 LOC103364246,LOC103152567,LOC106913527,LOC103459763,LOC103459764,LOC106945279 other upstream 1017996 19852928 ~ 19905952 (+)
LOC120553023 LOC106946322,LOC103151516,LOC104922640 other downstream 223208 21148267 ~ 21150351 (+)
arid2 arid2 other downstream 451813 21376872 ~ 21429238 (+)
G229423 NA other downstream 912863 21837922 ~ 21847020 (+)
G229425 NA other downstream 924152 21849211 ~ 21850601 (+)
G229422 NA other downstream 932924 21857983 ~ 21859209 (+)

Expression


Co-expression Network