G229413


Basic Information

Item Value
gene id G229413
gene name NA
gene type non-coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053134.1
NCBI id CM020931.1
chromosome length 29109922
location 21681560 ~ 21682539 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>TU311214
tgtgcttttcctactataataagtcaaaaatgtctgctgtgaaaaaggtccattaagATATGAGAGGCATCTCTCAAACTCTGGCTTATTACTCACAGACTGTAATTCCTAATCTTCTAAATTTGTATCATGGGAGAGATAAGGAACATCTGCCGAACACGTTGCCATAAAATTTGTTTGTGGTGCTAAAAAATGTGGGAAATCGAgcgtgtttaaaaaataaattaaaaaaaggtgtCTTTTCCTCTTTGGCTCCTAAAATTTCTCATCTGAGTTAACTTTGGAGTCAGTGGGGCAGTTCGTTGGCACTCTGTCACTTTGAGGCTCATAGCGCAAAATGTGTAAGTCTGTTTTGTGTAGATAGTTAAATTGTTTGAAAGAGTGGCATTTTTTTATGCTAGGTTTTGAATGTAAAAAGGAAGAGTGAAAATCGTGGGGTTCGGGAGAAGCTGAAGTAAAATTTTCAGAATAGTTTAACAGCTTAACGCTACGTGTGTATGTCACCCACTAACTTTGAAACATTCCGTCCATTCATTCCAATGGGGGGAAAATCCAAGAAAAACTTGGAATATTTCATAAAGTATTAAAGATACAAACGCTAAAAGTAATTCCGATAATGTCCGCAATGAGCAGGACATTTTGAAGTTTGAATGATTTGGAACAGTGTGAAGAAGAATAAGGATCATAAAAGGAAACAGAGAAGAACATAGATGGGATTGCAGCTGTTGCCCAGCAATCCCACTAATAAAGAGAAACTGAGAAGAACATAGATGGGACTGAATAACAGTTACTTAGAGATCTATTCTATAAAAGCTGTGGCAGTGTCCACAGTTGGCTTTAAATGGGAAATGCTT
>TU311216
ctcgaggtcaaggtgcaaagcagcctagggtgaaattactccgaaccatcactttaaggttatcaatttcagctgtgcttttcctactataataagtcaaaaatgtctgctgtgaaaaaggtccattaagATATGAGAGGCATCTCTCAAACTCTGGCTTATTACTCACAGACTGTAATTCCTAATCTTCTAAATTTGTATCATGGGAGAGATAAGGAACATCTGCCGAACACGTTGCCATAAAATTTGTTTGTGGTGCTAAAAAATGTGGGAAATCGAgcgtgtttaaaaaataaattaaaaaaaggtgtCTTTTCCTCTTTGGCTCCTAAAATTTCTCATCTGAGTTAACTTTGGAGTCAGTGGGGCAGTTCGTTGGCACTCTGTCACTTTGAGGCTCATAGCGCAAAATGTGTAAGTCTGTTTTGTGTAGATAGTTAAATTGTTTGAAAGAGTGGCATTTTTTTATGCTAGGTTTTGAATGTAAAAAGGAAGAGTGAAAATCGTGGGGTTCGGGAGAAGCTGAAGTAAAATTTTCAGAATAGTTTAACAGCTTAACGCTACGTGTGTATGTCACCCACTAACTTTGAAACATTCCGTCCATTCATTCCAATGGGGGGAAAATCCAAGAAAAACTTGGAATATTTCATAAAGTATTAAAGATACAAACGCTAAAAGTAATTCCGATAATGTCCGCAATGAGCAGGACATTTTGAAGTTTGAATGATTTGGAACAGTGTGAAGAAGAATAAGGATCATAAAAGGAAACAGAGAAGAACATAGATGGGATTGCAGCTGTTGCCCAGCAATCCCACTAATAAAGAGAAACTGAGAAGAACATAGATGGGACTGAATAACAGTTACTTAGAGATCTATTCTATAAAAGCTGTGGCAGTGTCCACAGTTGGCTTTAAATGGGAAATGCTTTCCATTTGAGTATAGATTCATAACTCcaataataaacatttattgTAAAGAAA

Function

GO: NA

KEGG:

id description
ko04080 Neuroactive ligand-receptor interaction

RNA

RNA id representative length rna type GC content exon number start site end site
TU311214 False 854 lncRNA 0.37 1 21681613 21682466
TU311216 True 980 lncRNA 0.37 1 21681560 21682539

Neighbor

gene id symbol gene type direction distance location
slc38a4 slc38a4 coding downstream 110447 21518625 ~ 21571113 (-)
gas2l3 gas2l3 coding downstream 316452 21335537 ~ 21365108 (-)
med21 med21,LOC102798687 coding downstream 380304 21295513 ~ 21301256 (-)
LOC120553384 stk38l coding downstream 388324 21269874 ~ 21293236 (-)
LOC120553569 arntl2,LOC100698791,LOC102799561,LOC102199297,LOC101476868,LOC102299859 coding downstream 419858 21234254 ~ 21261702 (-)
LOC120553490 ano4,LOC102780176 coding upstream 1671 21684210 ~ 21753271 (-)
LOC120553085 LOC103357120 coding upstream 133643 21816182 ~ 21827934 (-)
selenoo2 LOC106935628,LOC103357121,LOC107081058 coding upstream 146472 21829011 ~ 21836596 (-)
apex1 apex1 coding upstream 208071 21890610 ~ 21894722 (-)
si:ch211-214j24.10 LOC103357125,LOC104922658 coding upstream 245700 21928239 ~ 21935396 (-)
G229392 NA non-coding downstream 25398 21655902 ~ 21656162 (-)
G229390 NA non-coding downstream 38792 21642515 ~ 21642768 (-)
G229351 scaf11,LOC102797309 non-coding downstream 228408 21450463 ~ 21453152 (-)
G229296 NA non-coding downstream 416748 21264501 ~ 21264812 (-)
G229248 NA non-coding downstream 482301 21198468 ~ 21199259 (-)
LOC120553093 NA non-coding upstream 94494 21777033 ~ 21777676 (-)
G229527 LOC108228952,LOC107098074,LOC105922964,LOC106609550,LOC103375704 non-coding upstream 171844 21854383 ~ 21856289 (-)
G229539 NA non-coding upstream 195733 21878272 ~ 21878705 (-)
G229541 NA non-coding upstream 197365 21879904 ~ 21880220 (-)
G229546 NA non-coding upstream 229866 21912405 ~ 21947509 (-)
slc38a2 slc38a2 other downstream 206958 21461076 ~ 21474602 (-)
ptprz1b NA other downstream 536027 21063691 ~ 21145533 (-)
G229199 NA other downstream 723340 20957657 ~ 20958220 (-)
cdk17 LOC104930593 other downstream 1326933 20301092 ~ 20354627 (-)
rerg rerg other downstream 1559167 20066895 ~ 20122393 (-)
LOC120553090 NA other upstream 88549 21771088 ~ 21811097 (-)
G229716 NA other upstream 1422221 23104760 ~ 23239573 (-)
glipr1a NA other upstream 1521229 23203768 ~ 23210497 (-)
LOC120553170 NA other upstream 2007980 23690519 ~ 23711804 (-)
G229907 NA other upstream 2017158 23699697 ~ 23700198 (-)

Expression


Co-expression Network