G229527 (LOC108228952,LOC107098074,LOC105922964,LOC106609550,LOC103375704)


Basic Information

Item Value
gene id G229527
gene name LOC108228952,LOC107098074,LOC105922964,LOC106609550,LOC103375704
gene type non-coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053134.1
NCBI id CM020931.1
chromosome length 29109922
location 21854383 ~ 21856289 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>TU311375
GTTATTTCTCCAAGTTGGAGGACGGCTCGCTTTGAAGAATATGAGTTTGTAGCTCATTGTTTACCTTACTACGGTGATGCCATCCGTGGTGCCTATTAGGGCATCGACCAGAATGGCTACGGCTTCAGCACCACCGATCGCGACAATGACGGCTGCTCCCCGTGCATCTTTGGTGACATCGCTGAAACGAAATGTGCCAATTCAGACGGCGGCGGTTGGTGGTACAGCCGCTGTGGCTCTGCCAGTCTGAACGGCGACTGGCATCCTGCAGGTGATCACATCGGCTGGGCGTCAGGCCTCTACTGGCATACCTGGAAGAATCCTGCGCCTTACTCCTTGAAGGCCACCAGAATGATGATCAAGTCTGTCTGAGAGGAGCCACATTACTAGCTTTTGTTGTAACACAGCATTACATTTTAGCCATTTCAAAAATG

Function

NR:

description
PREDICTED: angiopoietin-related protein 5-like

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU311375 True 434 lncRNA 0.51 2 21854383 21856289

Neighbor

gene id symbol gene type direction distance location
selenoo2 LOC106935628,LOC103357121,LOC107081058 coding downstream 17787 21829011 ~ 21836596 (-)
LOC120553085 LOC103357120 coding downstream 26449 21816182 ~ 21827934 (-)
LOC120553490 ano4,LOC102780176 coding downstream 101112 21684210 ~ 21753271 (-)
slc38a4 slc38a4 coding downstream 283270 21518625 ~ 21571113 (-)
gas2l3 gas2l3 coding downstream 489275 21335537 ~ 21365108 (-)
apex1 apex1 coding upstream 34321 21890610 ~ 21894722 (-)
si:ch211-214j24.10 LOC103357125,LOC104922658 coding upstream 71950 21928239 ~ 21935396 (-)
LOC120553803 LOC103357126 coding upstream 81049 21937338 ~ 21945575 (-)
nav3 nav3 coding upstream 92447 21948736 ~ 22179107 (-)
zdhhc17 zdhhc17,LOC102798393 coding upstream 677965 22534254 ~ 22573905 (-)
LOC120553093 NA non-coding downstream 76707 21777033 ~ 21777676 (-)
G229413 NA non-coding downstream 171844 21681560 ~ 21682539 (-)
G229392 NA non-coding downstream 198221 21655902 ~ 21656162 (-)
G229390 NA non-coding downstream 211615 21642515 ~ 21642768 (-)
G229351 scaf11,LOC102797309 non-coding downstream 401231 21450463 ~ 21453152 (-)
G229539 NA non-coding upstream 21983 21878272 ~ 21878705 (-)
G229541 NA non-coding upstream 23615 21879904 ~ 21880220 (-)
G229546 NA non-coding upstream 56116 21912405 ~ 21947509 (-)
G229558 NA non-coding upstream 463984 22320273 ~ 22320528 (-)
LOC120553112 NA non-coding upstream 525476 22381765 ~ 22449387 (-)
LOC120553090 NA other downstream 43286 21771088 ~ 21811097 (-)
slc38a2 slc38a2 other downstream 379781 21461076 ~ 21474602 (-)
ptprz1b NA other downstream 708850 21063691 ~ 21145533 (-)
G229199 NA other downstream 896163 20957657 ~ 20958220 (-)
cdk17 LOC104930593 other downstream 1499756 20301092 ~ 20354627 (-)
G229716 NA other upstream 1248471 23104760 ~ 23239573 (-)
glipr1a NA other upstream 1347479 23203768 ~ 23210497 (-)
LOC120553170 NA other upstream 1834230 23690519 ~ 23711804 (-)
G229907 NA other upstream 1843408 23699697 ~ 23700198 (-)
LOC120553046 NA other upstream 2001930 23858219 ~ 23863974 (-)

Expression


Co-expression Network