G229676



Basic Information


Item Value
gene id G229676
gene name NA
gene type non-coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information


Item Value
chromosome id NC_053134.1
NCBI id CM020931.1
chromosome length 29109922
location 23207076 ~ 23208200 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence


>TU311580
AGTTTGTAGTTATAAACAGGTCTTAAAATGAACTGTGACAATCTCAGATGTCACAAAAAGccaagaaataaaatgtgtatgtgtgaaaataGGCAAAGGTAGCCAAAAGTGTTGATCTGTTAAACATAATTCAAAATCAGGACATGAAGAATTTTTTGTACCACCTAAAAAGGATTGAATACTCACGACAGAGCTTCTCCTCACAGTTCCCTTTACACCCAGAGCAGCTTGTCCCTTGTTCATACGGTCGCCTTCCGTTCACATTACCCCTGCACAAGGAACCAACATCAAAGTGGCATTAccaTATTGTAGGTAGCAACTGTTTGTTCATTCTGAGGTCATTTTTGTACTGAACCTACCACCCTCTattgtttttcttaaaatgttcaaatgtaGAAATACGCAGGTATATCTATCACATTGTTTGCTTTAAGATATGGAGATCTAAAGTGATAAGGCTGGCATTATTCTATGTTTTGTTATTGTCGACTGTTGCCTGGTGATTTCCTGTAACAGCtggtcactgtagttttttAGCAAATGTTATTTAAACAGGAGTACATAGTGCATTTGTTGAGAACTATGCTACTGCAGTGTTTGTTCCCAGTTCAATGGTGCGGCTCATTTTTCTGTTTGTAATAGTTATTGGCCAAAGGAGCTCTATGGCACCTAGGAATAATATGTATACTTGTTAGGATACAGTCAAGGTTGTTTTTGATAATTCCAGAATACCATTTTAAAATACTGCCAGCTTTTGAACCTTGCTAAGTTGTTGCGGTAAATTCCACATCCTTTTTTCACATGAAGTCAGGGCTGAAACCTTGGCTAACCACAGCCTCAAACACCAGCAGAGAAATGTTAACATGTACGGCGTATAGTATTGTAAACTGATCTAACATTTTTGTAGC

Function


GO: NA

KEGG: NA

RNA


RNA id representative length rna type GC content exon number start site end site
TU311580 True 908 lncRNA 0.38 2 23207076 23208200

Neighbor


gene id symbol gene type direction distance location
krr1 krr1 coding upstream 598 23192726 ~ 23206478 (+)
LOC120553757 NA coding upstream 158482 23021415 ~ 23048594 (+)
LOC120553035 NA coding upstream 240111 22956704 ~ 22966965 (+)
LOC120553032 NA coding upstream 289499 22892813 ~ 22917577 (+)
nap1l1 nap1l1,LOC102799271 coding upstream 469060 22715428 ~ 22738016 (+)
ccdc107 NA coding downstream 81378 23289578 ~ 23299318 (+)
pmpcb pmpcb,LOC106576546 coding downstream 324058 23532258 ~ 23562219 (+)
psmc2 psmc2,LOC103382982 coding downstream 380775 23588975 ~ 23594379 (+)
LOC120553165 LOC104923755 coding downstream 422735 23630935 ~ 23651180 (+)
LOC120553166 LOC105929793,LOC103363829,LOC108250965 coding downstream 446275 23654475 ~ 23676478 (+)
G229668 NA non-coding upstream 19304 23149910 ~ 23187772 (+)
G229659 NA non-coding upstream 20521 23104180 ~ 23186555 (+)
G229672 NA non-coding upstream 28124 23177956 ~ 23178952 (+)
G229667 NA non-coding upstream 57662 23148906 ~ 23149414 (+)
G229645 NA non-coding upstream 169749 23028839 ~ 23037327 (+)
LOC120552982 NA non-coding downstream 24298 23232498 ~ 23257861 (+)
G229821 dnajc2 non-coding downstream 371521 23579721 ~ 23585499 (+)
G229841 cbll1 non-coding downstream 459503 23667703 ~ 23679308 (+)
G229938 NA non-coding downstream 707611 23915811 ~ 23916388 (+)
G229945 NA non-coding downstream 739493 23947693 ~ 23948538 (+)
phlda1 phlda1 other upstream 463897 22739717 ~ 22743179 (+)
G229428 NA other upstream 1338779 21867201 ~ 21868297 (+)
G229422 NA other upstream 1347867 21857983 ~ 21859209 (+)
G229425 NA other upstream 1356475 21849211 ~ 21850601 (+)
G229423 NA other upstream 1360056 21837922 ~ 21847020 (+)
kcnc2 kcnc2,LOC100689973,LOC101475944 other downstream 107221 23315421 ~ 23440663 (+)
adm2a NA other downstream 624818 23833018 ~ 23848624 (+)
LOC120553686 LOC105929833,LOC107382334 other downstream 726100 23934300 ~ 23945640 (+)
LOC120553083 NA other downstream 1101342 24309542 ~ 24314707 (+)
G230148 LOC102781993,LOC101465723 other downstream 1412612 24620812 ~ 24778258 (+)

Expression



Co-expression Network