Gene
RNA
| Item | Value |
|---|---|
| gene id | G229872 |
| gene name | pmpcb |
| gene type | non-coding |
| species | eurasian perch (Perca fluviatilis) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_053134.1 |
| NCBI id | CM020931.1 |
| chromosome length | 29109922 |
| location | 23538248 ~ 23560342 (-) |
| genome version | GENO_Pfluv_1.0_2020_eurasian_perch_Genome |
| symbol | description |
|---|---|
| pmpcb | Predicted to enable metalloendopeptidase activity. Predicted to be involved in protein processing involved in protein targeting to mitochondrion. Predicted to act upstream of or within proteolysis. Predicted to be part of mitochondrial processing peptidase complex. Predicted to be active in mitochondrion. Human ortholog(s) of this gene implicated in multiple mitochondrial dysfunctions syndrome 6. Orthologous to human PMPCB (peptidase, mitochondrial processing subunit beta). |
| description |
|---|
| PREDICTED: mitochondrial-processing peptidase subunit beta |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU311811 | True | 290 | lncRNA | 0.53 | 2 | 23538248 | 23560342 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| phax | NA | coding | downstream | 6441 | 23529757 ~ 23531807 (-) |
| cmah | LOC101476433,LOC102306063,LOC100691852,LOC101466628,LOC102209249,LOC102786627,LOC103459632 | coding | downstream | 262705 | 23229083 ~ 23275543 (-) |
| LOC120553577 | NA | coding | downstream | 350486 | 23177186 ~ 23187762 (-) |
| LOC120553037 | NA | coding | downstream | 421827 | 23092819 ~ 23116421 (-) |
| LOC120553034 | NA | coding | downstream | 596129 | 22920182 ~ 22942119 (-) |
| dnajc2 | dnajc2 | coding | upstream | 1818 | 23562160 ~ 23588760 (-) |
| slc26a5 | NA | coding | upstream | 34010 | 23594352 ~ 23617076 (-) |
| cbll1 | cbll1 | coding | upstream | 116826 | 23677168 ~ 23684068 (-) |
| sbf1 | sbf1 | coding | upstream | 157997 | 23718339 ~ 23809346 (-) |
| glt8d2 | glt8d2 | coding | upstream | 307814 | 23868156 ~ 23885592 (-) |
| G229867 | NA | non-coding | downstream | 10709 | 23527105 ~ 23527539 (-) |
| G229802 | NA | non-coding | downstream | 124490 | 23413116 ~ 23413758 (-) |
| G229774 | NA | non-coding | downstream | 225162 | 23298709 ~ 23313086 (-) |
| G229784 | NA | non-coding | downstream | 251352 | 23285567 ~ 23286896 (-) |
| G229782 | NA | non-coding | downstream | 254197 | 23283529 ~ 23284051 (-) |
| LOC120553168 | NA | non-coding | upstream | 63238 | 23623580 ~ 23641504 (-) |
| G229908 | NA | non-coding | upstream | 142362 | 23702704 ~ 23707197 (-) |
| G229909 | NA | non-coding | upstream | 153114 | 23713456 ~ 23713677 (-) |
| G229952 | NA | non-coding | upstream | 386155 | 23946497 ~ 23948780 (-) |
| G229987 | NA | non-coding | upstream | 520185 | 24080527 ~ 24081153 (-) |
| G229716 | NA | other | downstream | 298675 | 23104760 ~ 23239573 (-) |
| glipr1a | NA | other | downstream | 327751 | 23203768 ~ 23210497 (-) |
| LOC120553090 | NA | other | downstream | 1727151 | 21771088 ~ 21811097 (-) |
| slc38a2 | slc38a2 | other | downstream | 2063646 | 21461076 ~ 21474602 (-) |
| ptprz1b | NA | other | downstream | 2392715 | 21063691 ~ 21145533 (-) |
| LOC120553170 | NA | other | upstream | 130177 | 23690519 ~ 23711804 (-) |
| G229907 | NA | other | upstream | 139355 | 23699697 ~ 23700198 (-) |
| LOC120553046 | NA | other | upstream | 297877 | 23858219 ~ 23863974 (-) |
| G229950 | gdi2,LOC100708443,LOC102215003 | other | upstream | 348214 | 23908556 ~ 23914692 (-) |
| sult4a1 | sult4a1,LOC102784496 | other | upstream | 1630919 | 25191261 ~ 25217693 (-) |
