G229952


Basic Information

Item Value
gene id G229952
gene name NA
gene type non-coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053134.1
NCBI id CM020931.1
chromosome length 29109922
location 23946497 ~ 23948780 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>TU311929
CCAGTGACAGAAGCGGTGTTGTCAGGATGAATCATCTATGTACTGTTCTTAGACTGTGTTTACCAGAATAAGTTGGCAGACAGTCCAGTCCAGTCCAGTCTAGTCCAGTCCAGTCCAGCACACATGTATGAGAGCCAGGTTCATGCAAAAACACAAGGACATCAAGCACGTCAACAGTACAATTTATTCAATAAATCAACATATTCAGAGCATCGCTTCTGTACAGCTTAGTAAGATAAATATTTATGACACATTTTGTGGGTTGGTTCTTCAGTTGTTTTGTAGCACCTTAAacgagacaaacacacacaggactttcacccaggagagcggggtTCGATtcccgtttgaaaataaaagtacacaGCGGAAGTCCCGTTCAGCATCACGTGCCTAACCGGAAGTAAAGTAACGTgggattttaacccaaaccacgatgtttttctaaacttatcaaagtagttttggtgcctaaacataaccaaactgcgactgtttcacaacgttaacgtgTATAAAATTGCGACCTTAACGTTCAAAACAGCGGCcgttacgttctctggtttagacaTTAGGTTGTATTTCCTGCCGCCACTTCTGTGGATCGTATTAGAGCATGGGCAtttctcaataccaagaatgcaaagtacggacttgtgttcttggggagaacgttcttgctggttggGAATTAACTCccaagttcacaagcacagaaaacgctgaaagtttgagacgatgcgttcttcctgttattgctcaacacccccagcacagaggctacctgcagggctccaaaatactagctagaaataaaaaccacaacaatataaccactttgtattaaaacaatctccggacaagaaaacctcataatgctacaactattgcaataatgttgaaaaataaaactaattgagctttaatttgattgtttatggtttagctcaaacaccccttacttattcaaaagagtggaacgtgatccctactattattagcatataagtttaagtcagtttaaattaaacaaataaataggcctatgcactggtgtgtcctatgtgttcctattagtgttatgtggaattatcatttctatattattgtagtgcactgtatatgcccagggagatggaaattagaaattcaaattataaaggttggtgtctcccctttagtctacataacatgtcatagccactttatgtacaactgttcatttatcatacagactgaaactcaacttctaataaatcagaagacaaatacaccaaaaatatgaactaaatacaaaatataatgtatgctatagcctatggcataatttaaacaagtctcccgaaaagaGGCGGGTATATCTCATggactaataatatacagtctatctatggtatatctctcctctgcctgctgcgctgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgcttgttgagtttaactccgaaaagacagttaaccacatgtgttgtgatatttaaacaaacgatccgaaacggcgaaataaaagcctcttatttacgggaccggtctaaaagacctccgTCTTACAGCGGGATATCCGAGTGGGACTGTCCGAGCGCCGAGCaagcggccccggcaggcgcaagctggcggccgcgtcattttatggagctccgaaaaCAGTGGGGAGAGAAAACTTTGGAgaaaattgtcaattcggcaaagattttcgcgagactgcctatattcgaaatataaaccgttcatttctcacctaaaatgttctcagaagtgaatttagtgatgaataagatggcgaaaattgttaaaattgtcccgtttttgggctgtctatgtactggaaatccaaccatcattgaatgccgaaatgaatgttgggatacaggtgctgcgaagttcatacaagttaccaaccaaTGCATCCTCGgtaaatgggcgtgtcaagaataCATCCGGGAAATTTAACTGTTCTTGAAACAAgttgtaaaaaaatgtaatcatcgttttgcttgatttgctaaactctatgatggctaaggaactctttgctgacttttgtagggctttatgtcgTGACCAAAGTGAGACAAAAGTCAAAAAGAGTGACTAAACGTCTGATAAACCCcccaaaaagtcagaaaaagcaacaaaaatggcGACATGCAGTATTCCACGGTAATAGATATTTTAATTTTTCCGATGTatgcacgtcaataaactctccatgtctg

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU311929 True 2284 lncRNA 0.40 1 23946497 23948780

Neighbor

gene id symbol gene type direction distance location
glt8d2 glt8d2 coding downstream 60905 23868156 ~ 23885592 (-)
sbf1 sbf1 coding downstream 137151 23718339 ~ 23809346 (-)
cbll1 cbll1 coding downstream 262429 23677168 ~ 23684068 (-)
slc26a5 NA coding downstream 329421 23594352 ~ 23617076 (-)
dnajc2 dnajc2 coding downstream 357737 23562160 ~ 23588760 (-)
net1 net1,LOC104963784,LOC103383002,LOC107560732 coding upstream 117629 24066409 ~ 24109573 (-)
podxl podxl coding upstream 308003 24256783 ~ 24284709 (-)
LOC120553465 nfyb coding upstream 416558 24365338 ~ 24375224 (-)
slc41a2b LOC103365955,LOC104923736,LOC106530824 coding upstream 559996 24508776 ~ 24565806 (-)
trnap-agg_20 NA coding upstream 628170 24576950 ~ 24577021 (-)
G229909 NA non-coding downstream 232820 23713456 ~ 23713677 (-)
G229908 NA non-coding downstream 239300 23702704 ~ 23707197 (-)
LOC120553168 NA non-coding downstream 304993 23623580 ~ 23641504 (-)
G229872 pmpcb non-coding downstream 386155 23538248 ~ 23560342 (-)
G229867 NA non-coding downstream 418958 23527105 ~ 23527539 (-)
G229987 NA non-coding upstream 131747 24080527 ~ 24081153 (-)
LOC120553435 NA non-coding upstream 168952 24117732 ~ 24202125 (-)
G230067 NA non-coding upstream 255250 24204030 ~ 24225411 (-)
G230089 NA non-coding upstream 366303 24315083 ~ 24315857 (-)
G230118 NA non-coding upstream 530314 24479094 ~ 24479656 (-)
G229950 gdi2,LOC100708443,LOC102215003 other downstream 31805 23908556 ~ 23914692 (-)
LOC120553046 NA other downstream 82523 23858219 ~ 23863974 (-)
LOC120553170 NA other downstream 234693 23690519 ~ 23711804 (-)
G229907 NA other downstream 246299 23699697 ~ 23700198 (-)
G229716 NA other downstream 706924 23104760 ~ 23239573 (-)
sult4a1 sult4a1,LOC102784496 other upstream 1242481 25191261 ~ 25217693 (-)
LOC120553115 NA other upstream 1646798 25595578 ~ 25601380 (-)
mkrn1 mkrn1 other upstream 2222540 26171320 ~ 26196510 (-)
G230594 mrps33 other upstream 2426912 26375692 ~ 26381365 (-)
G230730 NA other upstream 3168426 27117206 ~ 27118597 (-)

Expression


Co-expression Network