G230109


Basic Information

Item Value
gene id G230109
gene name NA
gene type non-coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053134.1
NCBI id CM020931.1
chromosome length 29109922
location 24482310 ~ 24485517 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>TU312111
CAATGCAGTATGTTTGTGTACAGTGTTGACATGATGCCATTCATTCTGCTGTTGTTTTTGAGCTGTCGTGTTTGGATCGATTAGTAATTACTCTGGTTGCCTCAcacacttacttacttacttacttacagacatacacacgccATGCACGTACACACTGGGTTTGTGTGGCACTATTGTTTCTCTGTGCCtttcattcacagcaacacaaagcAAAGAATTCAGAGCGCCTTCTCTCTGTGTTCACCTGGGCCTTCCtttatactgacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacagattcattCATTGAGTGTCAACCCCCAAATCCAGTGTCTGCCAGCAGGACAGATTCTGCTTCTCACTATGCTATTTCACACACTCTGCTGTTGTTAAGTTACCAACCTAATTAGAAAACGATTGGGGAGACAATGGTTTGCCAAAGATTGCCTTGTCTACCAGCTTCTACACCGCATTGTAAATATGGATTCAGATTTTGGATTTGCTGGATTACTTCATGGCACAAAAGAAgaattgtttaaaataaaaaaaataaaaacatacagagAGGGGAAGAAGAGACAAGTATCAAGATCCACTTTGCAACAGAAGGCACCCAAATTCAGCTTGAGGAAttacaacacatacagtaactgTAAAAGACTCACATGGCAAATCCCTTACTACTGTATTTACGCAGATACGCAcactgactatgtttacatgcacataatattccgacttttgcccttattccaaaaaagacaatattccgactaagcaGTTTACATGGCCAATGAAAGTGAGTATTCCACAAATATTCCTgtaggatttttttcaaagtttgccatcctctttcattccttcaagcCGGTGTTGAGCTGTttgtgcatatccaaaaacctgttgatatccaagtctttcataatgttcaaaagtagctgtgtttctccttctgttttttttgggcCTACATCTCTACCACAGCCTTTCAAAATGTTGTGTTCAaaaccatagcaacacacaaAGCGGACCGTAAAACGTGAACTGGCACGAGGCcgtaaactgcagtaaaaaccccgattgagacgcatattctgagtgcgctgtatacatgtccaaaaaatgctttctaaaacctgaataataccagaatatcccacgtcttaatcggGAAAATGCTAAATTTGGAAAAAGGCCTTTGTTGGAATATCTaaacagaatatgctgtttacatgacctgtatcaaattcagaatattgtcatataGCGGAGTATTAGtaaacatgtaaacatactcactgTTAACATGCACTCAGACCTGCAGAGGCCCGTGTGACTGCACCGGAGAAAAGCTCTGATTCTCCTGCTGTCTCCtcggtttttttcttcttaaaaacaTGCTTAAGTGTAATCTTGATCCTTTTTTGAGAATCTTGACTTGCTGGCACgcccttttttcttttacacttGCGCTGTAAACAAGTGTGTTTTTTGGGGTAGAAGTCACATAAATAATCCTGCTTATAAGAtttcattatttaatttattacaaCTATGGCCACTATTTATTGTATCAGTTATAATAACACTGTAGCCACCAAAGTAGCTGCTGACATATGGAAACATGCCGACATTGCTGACACTAAATAATCCCTCTTTGTACAGGAAAGCTGTTGTGCACAACTATGGCAAGCACTATAGGTCAAAGTAAGTTTGTCTGTAATAGTTTGGTTCCAAGACTTAAAATCAATTATTGATTGAAAAATTAcgataccaataccagtacCCTTAAAGTCATACCGATATCAATAGAGTACTTCATTTGatacctttttttcttcttcattcaaTACCCATCATGCGAATGGAAGCTTTCACTAGCGTGAAATGCCACCACTCCTGCCTGTCCAAATTATTTTATTGCAAGTACATTTTGAAAGTGttcaaattattaaaatatgtattaaataACTGCACAATGAAGTTATTTGGGCTCGACTTCACCACAACACGGACTGTATGGGATGTAGCTTCTGCGGAAGTTGGCCAATCATATGGCGCATTAAATTGAAGAACGCGTGCGGCGATTGGCTgcgagataaaaataaaaaaaatacgaATAGTGCAGGCATCGTTTGACTGGAGAAGTATTAATACTACTTTGTACTGGGCTATTTTGGACGATAGCTTAGTCAACAGCCACATCTCTGATCTCTGACGTTTAGCGATTCAAATAGAGCTTTGTAGATAGGATAAAGAAGGGGGGTGTCATCTTCATACAAAGTGAGCAATAGCTTAGCTGAGTTCTATCAAGAGCCTTTCTGccgtttttttgaaaatgtctttgttttacaCAGGGCAAGTGTGAAGAAGATGCCCAGTCTAACACATTtaagtcattttatttaataaattagtgCAGGTGGAAGTCTTATCAtacagaagaggattagggccacatgtgaaaaaaaaaatgtattgagttctgagtttaaagtcagaattatgaaaaataaagtctgaattatgagaaaaaaagacttcaTGTGTTACCCTGACATCTCGTACAGCCTCCTTCAGTAAGCAGAGATCACACACCCTGTGATCTCCGGAGTGTTTCCCAGCAGCTTCATGTTCTGCCAGATGGCGTGGACGTTGTGCTGTAACCTgtacagaaatgtgtgtgtgacttcttttttttggaaTGAGCCCTAAATCAGCCGTGTCTGTGACTGAATTTATACCATGTCATCAGCATTTCTCACCATTGTGTGTATCAGAGTGTCTCATGTGCTGTAACTACAAATGGCGAAGGCTGGAtaatttctgtatgtgtgtgtgtgtgtgtgtgtgtccctctgggAACGTCTTCTTCAAAACTCTCGTTCAAACGGGCgccacttatttatttatttattctcaaGACAACCACCCATACTCCTTCCTCGCAATCGCCATGGCAACAACTGTCTGTAGCTCCCGTTTCCTCCCGGGACAGCCTCTCACTGTTCTGTTTTACTCCGTTCATATTCAGACGCACTTACCGAAATCATGAATAATTGACTGTGTACTGTACACACGAGTGTGGTGTCGACCATACAGCAGCCCGACCTGCGGTTCATCCTGTCCGatgttttcacaataaaatgacacTGAAA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU312111 True 3208 lncRNA 0.40 1 24482310 24485517

Neighbor

gene id symbol gene type direction distance location
chst11 chst11 coding upstream 3547 24384898 ~ 24478763 (+)
LOC120553464 LOC107381693,LOC105020203 coding upstream 116961 24320276 ~ 24365349 (+)
ift46 LOC107372934 coding upstream 173866 24301765 ~ 24308444 (+)
mkln1 mkln1 coding upstream 232803 24209619 ~ 24249507 (+)
asb13a.1 LOC103363234,LOC100709988,LOC105929846,LOC101482319,LOC102215476,LOC108241840 coding upstream 548434 23924156 ~ 23933876 (+)
nopchap1 LOC104942935 coding downstream 80724 24566241 ~ 24571321 (+)
LOC120553040 NA coding downstream 111833 24597350 ~ 24604947 (+)
LOC120553385 NA coding downstream 135348 24620865 ~ 24635265 (+)
LOC120553387 NA coding downstream 246679 24732196 ~ 24749828 (+)
LOC120553386 NA coding downstream 287984 24773501 ~ 24788753 (+)
G230011 NA non-coding upstream 218245 24260059 ~ 24264065 (+)
G229994 NA non-coding upstream 366189 24112965 ~ 24116121 (+)
LOC120553514 NA non-coding upstream 387145 24088025 ~ 24095165 (+)
G229976 net1 non-coding upstream 415321 24065214 ~ 24066989 (+)
G229974 NA non-coding upstream 487475 23994566 ~ 23994835 (+)
G230192 NA non-coding downstream 310436 24795953 ~ 24798741 (+)
G230249 NA non-coding downstream 699295 25184812 ~ 25191943 (+)
G230260 NA non-coding downstream 866360 25351877 ~ 25352174 (+)
G230259 NA non-coding downstream 890830 25376347 ~ 25377601 (+)
G230327 NA non-coding downstream 950634 25436151 ~ 25494355 (+)
LOC120553083 NA other upstream 167603 24309542 ~ 24314707 (+)
LOC120553686 LOC105929833,LOC107382334 other upstream 536670 23934300 ~ 23945640 (+)
adm2a NA other upstream 633686 23833018 ~ 23848624 (+)
kcnc2 kcnc2,LOC100689973,LOC101475944 other upstream 1041647 23315421 ~ 23440663 (+)
phlda1 phlda1 other upstream 1739131 22739717 ~ 22743179 (+)
G230148 LOC102781993,LOC101465723 other downstream 135295 24620812 ~ 24778258 (+)
LOC120553523 NA other downstream 877365 25362882 ~ 25373996 (+)
msrb3 msrb3 other downstream 1156323 25641840 ~ 25662819 (+)
LOC120553706 NA other downstream 1324890 25810407 ~ 25812828 (+)
arhgef39 arhgef39 other downstream 1552671 26038188 ~ 26106823 (+)

Expression


Co-expression Network