G230118



Basic Information


Item Value
gene id G230118
gene name NA
gene type non-coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information


Item Value
chromosome id NC_053134.1
NCBI id CM020931.1
chromosome length 29109922
location 24479094 ~ 24479656 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence


>TU312120
TTCTTCCCAAACATTGAACCTTGGGCTGTGGGGGACCCCTGAAGGTCCAGCGCTCGCTATAATTGTCGGCTTTTTTTTCAGTCTAAGTGCAAAAAATTGCAGATTCTGATAGGGAGCCTCTACAAGTCAGAGCCTCGAGATTAGGTAATAAAGAAGGACCCACTCTACGGTTAGTCCATCAATTTTCCTTCAAAACTAGGACTTTATTAAACAGACTGCATAAGAAAACATTGTGTCTGGTTAAGTCAAGTGCAACAAAGAGATGCAGCTTTTCCaaaaaatatctctttcactttgAAGCCGGAGTGGTTTGTAATTTACATAGAGGTATAAGAAACTAAatgacactctctctctctctctctctctctctctctctctctctctcggtctcccCGTATAATGCTTACACAACAGCCTGTAATCCAATTCACAGCGTGATGGAGGGTGCGGTTATTAACCTTGACATTGCTTAGCATCACTAACATTAATCACATTACAGTATGAGATACAGTCTCTGATTCTGTGAGCAGGGCAATAGATTGTTGATATGTACACTGATA

Function


GO: NA

KEGG: NA

RNA


RNA id representative length rna type GC content exon number start site end site
TU312120 True 563 lncRNA 0.41 1 24479094 24479656

Neighbor


gene id symbol gene type direction distance location
LOC120553465 nfyb coding downstream 103870 24365338 ~ 24375224 (-)
podxl podxl coding downstream 194385 24256783 ~ 24284709 (-)
net1 net1,LOC104963784,LOC103383002,LOC107560732 coding downstream 369521 24066409 ~ 24109573 (-)
glt8d2 glt8d2 coding downstream 593502 23868156 ~ 23885592 (-)
sbf1 sbf1 coding downstream 669748 23718339 ~ 23809346 (-)
slc41a2b LOC103365955,LOC104923736,LOC106530824 coding upstream 29120 24508776 ~ 24565806 (-)
trnap-agg_20 NA coding upstream 97294 24576950 ~ 24577021 (-)
LOC120553455 NA coding upstream 311836 24791492 ~ 24797223 (-)
aldh1l2 aldh1l2,LOC104948869 coding upstream 317739 24797395 ~ 24826222 (-)
samm50l samm50,LOC108250208,LOC102304796 coding upstream 363736 24843392 ~ 24863709 (-)
G230089 NA non-coding downstream 163237 24315083 ~ 24315857 (-)
G230067 NA non-coding downstream 253683 24204030 ~ 24225411 (-)
LOC120553435 NA non-coding downstream 276969 24117732 ~ 24202125 (-)
G229987 NA non-coding downstream 397941 24080527 ~ 24081153 (-)
G229952 NA non-coding downstream 530314 23946497 ~ 23948780 (-)
G230119 NA non-coding upstream 51 24479707 ~ 24481679 (-)
G230120 NA non-coding upstream 2031 24481687 ~ 24482539 (-)
G230121 NA non-coding upstream 2959 24482615 ~ 24485522 (-)
G230165 NA non-coding upstream 89646 24569302 ~ 24571318 (-)
G230170 NA non-coding upstream 141263 24620919 ~ 24680361 (-)
G229950 gdi2,LOC100708443,LOC102215003 other downstream 564402 23908556 ~ 23914692 (-)
LOC120553046 NA other downstream 615120 23858219 ~ 23863974 (-)
LOC120553170 NA other downstream 767290 23690519 ~ 23711804 (-)
G229907 NA other downstream 778896 23699697 ~ 23700198 (-)
glipr1a NA other downstream 1268597 23203768 ~ 23210497 (-)
sult4a1 sult4a1,LOC102784496 other upstream 711605 25191261 ~ 25217693 (-)
LOC120553115 NA other upstream 1115922 25595578 ~ 25601380 (-)
mkrn1 mkrn1 other upstream 1691664 26171320 ~ 26196510 (-)
G230594 mrps33 other upstream 1896036 26375692 ~ 26381365 (-)
G230730 NA other upstream 2637550 27117206 ~ 27118597 (-)

Expression



Co-expression Network