G230119


Basic Information

Item Value
gene id G230119
gene name NA
gene type non-coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053134.1
NCBI id CM020931.1
chromosome length 29109922
location 24479707 ~ 24481679 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>TU312121
GATCTTCTCACCATTTTggcaaaatgtcaaactatccTTTTAATATGTACTGATTTCTATCTGTACTCACTATGCTTCATtgtataaaaaaatgtgttaatctgtgcacaaataacaaaaataaaaatacaagcaCAAATCACATCGTCAGCTCCTCAAGAGAAACACTCCCTCAGATATGTTAAGAAGCCTTCCTGTGTTCCTTTCAGCAAATATGTAATTCAGTCTAATAGTAGACATCGTTCAAAAACAACGTAAATAAGCCTGTTGGCTTGACTTGAATACAAACAAACACTCCTACAGTATGAGACAGCTGGTCAGTGTTCAGACCAATGCAGACGGGGAAGTTAAGAATAGGGACAAAAGCATGTGAAATGTGGCTGTTTGTTATTACCCGAGGGAGGCAGAAGGTCAGTTGGGGTCATTACGGGAGGTGCTCTTTCGGTTCCCCGTGGGGATTCTTTCCCAGCTCTGTTTGTTTAAGCAGGCTGCAGGGACGGAAGGGATCATCGacactgacttttttctacttttaataCACGAGGCCACTTTTGGACTGGGGTGGGAGAGAGGAAAATCGAGCGAGGAGAAGAGAGGCCTCTGTTAACGGCTTGTTTGCAGCCTAAGAGGTCCTTTGTGTGTCGTTTGTCTTCCATTCTGGGGGCTTAATGAGCAGTTTAAAGCCGTGGCTCAGCCATTGTGTTAAAGTGGAGAGGTGCTGCTCGACCCGTGCTGCTGCGCACAACTGCTGAGTAAGATGCTGCGTGGCGTCAACATAAGCAGGAGAACTAATGTGCGAGCagagtttgtgtgtatttttgtgcgCCTGACCCTGGACACTGCCCTGTAGGAGGCCGTGCTGAGAATACAGACATTGTTTGTGCAGGAGAACTACAGGCCAGGCCAGTAGCTTTTCTCTTTTATTAGAGCCAGATGTCTGTGTGGGGGGTAAGAAAACTACGGTTGTTCTTGCATTATAACCCCCTCACaggcatgtgcacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacactacagtgtCATCAAGTCATCACACCCATCAGTAATGCTGACATTTCACTCACCAGATCCATTTAAAGATATGGGGTCACTATTAGACCAAACACAATAGCGAAGTGGATCTGGAATTGCAGTAAGAGCTATCAAGTGAACAAGTACAGTTTACCGATTTTTTTATAATTGCTTATAAAAAAAACCCATCTCCTGCATTGCAAAGCTGTATGTAAATTACTTTACACTATTTACAGACATACAATATTTTTATAGCCTTTCATAGAAAAAGATTAAATCATCTTTTTCATAAAGCTGTGTCAGCAGCAAAAGTAACTGCTGGGCCCCTACCCACCATATGCATTGTGGACAGTATTAATATGCTGGGATATTACATGACCCCAAGTTTGCGAATTGATTGAAGGATATGCGTCATGTAAGAACATTATCTGCTGAAAAGTGAAGGTCTTAAAATGAGGTTTTGTTACAGGGATTCATGACGCTTTAACTAATTACacgttttacttttaatactgtatgtgatgtACTTGGTTTATATAAAATCATAATTGTGGTCCTGTAAATCTACTACTGCTACTTCTCTCTACTCCAAAGCACAGCACCTATTGCATGTCTGTCCGTCCTGGACAATGGGTTCCttctttgttgttttaaagATTTTCCCTTAAGGGAATTTGTTTGTCTGGTTGCTTTTTTGTGGAGTTTTTCCTTATCTGAATTGAGGGTCTACAGATACATAATGTCATACTGCACTGTTTGTTATATTGGGTTTTTAAAGGGCCTCAAGATCAGATATACCAGGACCCATCTTAAAACCCTTAACATCCATTTGTTTGCTGCTTATCCTTTTCAGATGGTTGCAGTGGGCATTGTGCTTTTGT

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU312121 True 1973 lncRNA 0.42 1 24479707 24481679

Neighbor

gene id symbol gene type direction distance location
LOC120553465 nfyb coding downstream 104483 24365338 ~ 24375224 (-)
podxl podxl coding downstream 194998 24256783 ~ 24284709 (-)
net1 net1,LOC104963784,LOC103383002,LOC107560732 coding downstream 370134 24066409 ~ 24109573 (-)
glt8d2 glt8d2 coding downstream 594115 23868156 ~ 23885592 (-)
sbf1 sbf1 coding downstream 670361 23718339 ~ 23809346 (-)
slc41a2b LOC103365955,LOC104923736,LOC106530824 coding upstream 27097 24508776 ~ 24565806 (-)
trnap-agg_20 NA coding upstream 95271 24576950 ~ 24577021 (-)
LOC120553455 NA coding upstream 309813 24791492 ~ 24797223 (-)
aldh1l2 aldh1l2,LOC104948869 coding upstream 315716 24797395 ~ 24826222 (-)
samm50l samm50,LOC108250208,LOC102304796 coding upstream 361713 24843392 ~ 24863709 (-)
G230118 NA non-coding downstream 51 24479094 ~ 24479656 (-)
G230089 NA non-coding downstream 163850 24315083 ~ 24315857 (-)
G230067 NA non-coding downstream 254296 24204030 ~ 24225411 (-)
LOC120553435 NA non-coding downstream 277582 24117732 ~ 24202125 (-)
G229987 NA non-coding downstream 398554 24080527 ~ 24081153 (-)
G230120 NA non-coding upstream 8 24481687 ~ 24482539 (-)
G230121 NA non-coding upstream 936 24482615 ~ 24485522 (-)
G230165 NA non-coding upstream 87623 24569302 ~ 24571318 (-)
G230170 NA non-coding upstream 139240 24620919 ~ 24680361 (-)
G230174 NA non-coding upstream 152341 24634020 ~ 24663681 (-)
G229950 gdi2,LOC100708443,LOC102215003 other downstream 565015 23908556 ~ 23914692 (-)
LOC120553046 NA other downstream 615733 23858219 ~ 23863974 (-)
LOC120553170 NA other downstream 767903 23690519 ~ 23711804 (-)
G229907 NA other downstream 779509 23699697 ~ 23700198 (-)
glipr1a NA other downstream 1269210 23203768 ~ 23210497 (-)
sult4a1 sult4a1,LOC102784496 other upstream 709582 25191261 ~ 25217693 (-)
LOC120553115 NA other upstream 1113899 25595578 ~ 25601380 (-)
mkrn1 mkrn1 other upstream 1689641 26171320 ~ 26196510 (-)
G230594 mrps33 other upstream 1894013 26375692 ~ 26381365 (-)
G230730 NA other upstream 2635527 27117206 ~ 27118597 (-)

Expression


Co-expression Network