G230192


Basic Information

Item Value
gene id G230192
gene name NA
gene type non-coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053134.1
NCBI id CM020931.1
chromosome length 29109922
location 24795953 ~ 24798741 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>TU312222
tttctctgtggactgagcgttttgatacttacagtttttatatagcacctcgacctgcttcataataataaaaaatacaaaaaagacatggaaaccTTCCTTTTTACAATATGTGACCATACCATGTATCAAATGTAAGATATGCAAAATAACTGGTAGCACCAAGAGCAGCATCACTGCTTCTTCCCATCATGTAGCATGTTTGCATATTTATTGAGTAACAGCAGCATTACACAGTAAAATTCAAATCAAAGTTTATTTCCTGTTGCATGACGTTATCCTACTGGCTGAACACTGTTTATTGAGGGGACATATTACACCTTTTCCACAAAGGGGGAGAAAAAACACTTGCTTATTAGCCCTTGCTGCCTTTACTGATAATGTGGGACAAACATAATACTAATTTCACAACTTCTTCTTATGAGTGAtggataattaaaaaaaaaactggagctGGTGTTTTTAACAAATATAATATAGTGTTATAACAtacagtctgtgtctgtctgacaaaaatatatcacatatatatattcccTTCTTTTGTtagaaaatatttacaaaaaaggtCAAATTTATCAAAGGGAAGAGAGTGAATCTCTAAAGTTATGTGGGAACAGACAGCTGAATCATTtctaacatatatatatatatataatttgaaaCACGCCTGAGACAATTGCCTATTTCTTTTGCTATTTTTCATCTATGTTACAGTCACCAGTAATACTACGCAGAATGCTCCGACATTTGAGTGACAACACAAGAAACTACTAAATTCAATTGGCATTACTATTTTCACAACAAACATCACCGCTAAAGTCTGTTGTCTCTTGAACATACTTTCCTCACGACAGCTTGTGAATGTGATGCTATGAAATCTCAAATATTGGATGCCAGCTGCGTGCCAAAATAAAATAgtgttaattaaattaaataatgttaaCTGTAATGGATTACCTGTCGTAATCAAGCTGCAAGTCCCTGAATGATGATTTGTGTAGTGTACTCAAAAGAAAAGTCAAATCTGCCCAACAAAGTAGGAGTACTCCATTACAGTCACTCTTTCGTTgcaatagtctcgcattgccagaccttcctccacagcgctgcaaaggagggtctggctagtccacacagcattccgggatgggataaaaagtgctctggtttattggcatttcctcAAACAAAtgccaatcgtcttgggcggcactaagctccgcacggagcctcggtgcctctgcaaaatagcctcaggaaggaacttgttttggtggaacgtgtacattcaaaagtagttttttgttttgttttgaagatcattttttggggcttttttcctttatttgatagaggatagacaggaaaagggacagagagagagaggggttgacacgcagcaaagggctgcaggtcggattcaaaccctgggctgctgcaaaggactcagcctccATGGGGCCCACGCTCTACTGCGTGAGCTAGAGTCCGCCCCGTTCAAAagtttagtcgtgcgagagaaaactcagattggacagatagtctagctagctgtctggatttaccctgcagagatctgaggagcagttaaccatagtcctcacaaatccaccagaggttagaacgccaacacaaagaaaggggaaggtaacgggacatctggccgaaatgagGACcttccggcggaatttccagtgGCGCCTGAACAAGcgcggaaatgaaacgtcgtcgatatggAGTACTGCTGCAATGACGGACAGGAAGCCCAAGTGTTGACGCCTGCGcagtatttttgtgtgttgatgtgtgtacCGCAGATGAAAACTATAAGATTAGGGttaaaagctttgaaaaaaCCTTTAGCAAATTGACCTTTGCTTTCATGTGGATTAATTGAGAATTCAAATGTAACTCTGGCTTTTTGACCTGTTTTCGATGATAAATTCTGACCAATAGCTCTGTGATTAAGCAGTTTAGTCCTGTCAGGCAGGACACTGGCTACTCCAAAACTCAACCCAAAGACATCTAAACACACGCTACAACAGTCATATTCATGTACAGATGAGTTATCCATCAATAAGAAAAGTGATACGGCACACAGCAGCCCAAAAGCTGTCAAAGAGTAACCAGGGAGATATTATAGGAATGATGAAGGCGAGTGAATGAGAAAGGCATGATTGCAGATGATTTTCAAAAGTTTGAATGGAACTGATTAACGCGATTGATAATGATGGGAAAACAGATTTTAGGTCGAAaatagtgttttaacataaaacaCTTTTATGGAACTGAAAGATTGAAAATAGTCTTAACCAGCCCGGCTGCCACCAGACGTCCGACTCTGGGTTTTATGTGTGGATATACAGATGTGTGTAAACCACACGTGTCCCTTGTCCACgatctgattattattattttttttacgcaGGTGTCCAAACTGCGGCAGAGACGAACAACAAAGCTCTCCTCTCattcatacagtacacacacgtcacacgcgcacacgcacaaatacacacacaagcacgctgTCCAGAAGCAATGCTGTATGAAGCTGGATGTCTGCCTGAAGCAGACAGACGAGTCCTTTTCCTATTGAGATGTGGCTCCGAGTTGGTTGGAGTCCGCCCCTCAGTACTCCACAGTCACTGCTTTGGTCTTGAGGTATTCCAGTAGAGCGTCCTCTCCT

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU312222 True 2692 lncRNA 0.41 2 24795953 24798741

Neighbor

gene id symbol gene type direction distance location
LOC120553386 NA coding upstream 7200 24773501 ~ 24788753 (+)
LOC120553387 NA coding upstream 46125 24732196 ~ 24749828 (+)
LOC120553385 NA coding upstream 160688 24620865 ~ 24635265 (+)
LOC120553040 NA coding upstream 191006 24597350 ~ 24604947 (+)
nopchap1 LOC104942935 coding upstream 224632 24566241 ~ 24571321 (+)
LOC120553142 NA coding downstream 31457 24830198 ~ 24835745 (+)
scube1 scube1 coding downstream 71206 24869947 ~ 24992165 (+)
mpped1 mpped1,LOC103131679,LOC106525904 coding downstream 212493 25011234 ~ 25113193 (+)
pnpla3 LOC103361965,LOC104964946 coding downstream 419799 25218540 ~ 25241938 (+)
LOC120553672 LOC103361951,LOC100711848,LOC101487241 coding downstream 445796 25244537 ~ 25260350 (+)
G230109 NA non-coding upstream 310436 24482310 ~ 24485517 (+)
G230011 NA non-coding upstream 531888 24260059 ~ 24264065 (+)
G229994 NA non-coding upstream 679832 24112965 ~ 24116121 (+)
LOC120553514 NA non-coding upstream 700788 24088025 ~ 24095165 (+)
G229976 net1 non-coding upstream 728964 24065214 ~ 24066989 (+)
G230249 NA non-coding downstream 386071 25184812 ~ 25191943 (+)
G230260 NA non-coding downstream 553136 25351877 ~ 25352174 (+)
G230259 NA non-coding downstream 577606 25376347 ~ 25377601 (+)
G230327 NA non-coding downstream 637410 25436151 ~ 25494355 (+)
G230336 NA non-coding downstream 696407 25495148 ~ 25495399 (+)
G230148 LOC102781993,LOC101465723 other upstream 17695 24620812 ~ 24778258 (+)
LOC120553083 NA other upstream 481246 24309542 ~ 24314707 (+)
LOC120553686 LOC105929833,LOC107382334 other upstream 850313 23934300 ~ 23945640 (+)
adm2a NA other upstream 947329 23833018 ~ 23848624 (+)
kcnc2 kcnc2,LOC100689973,LOC101475944 other upstream 1355290 23315421 ~ 23440663 (+)
LOC120553523 NA other downstream 564141 25362882 ~ 25373996 (+)
msrb3 msrb3 other downstream 843099 25641840 ~ 25662819 (+)
LOC120553706 NA other downstream 1011666 25810407 ~ 25812828 (+)
arhgef39 arhgef39 other downstream 1239447 26038188 ~ 26106823 (+)
mrps33 mrps33,LOC106591474 other downstream 1573973 26372714 ~ 26381109 (+)

Expression


Co-expression Network