G230249


Basic Information

Item Value
gene id G230249
gene name NA
gene type non-coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053134.1
NCBI id CM020931.1
chromosome length 29109922
location 25184812 ~ 25191943 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>TU312293
TaaatagaaaggctgctgcgtggagtaaagttgcccaggacgttgacatgtcaggtcggttaaatgtgatatagcggtataatgtcaatagttcggtgtctgttgctagctaaccagttagcattagcaggtttgtttatcagtaccatgGCAACGCTAACTTCCGTCGGATAGGAACCGTCCGTAGCTTTTCGCAAGAGTTCAATTTTTTGAACGCATCcggatgaccaactgacacgattTTTTTCGCACCGCACTCGTTCGGACCCGGTTCGGACCCATTCGCATGCGGTCTGCGAatctccataggaaatgaatgacttccggccGTTTCAAAGCCGtatcggagctgatttcaagtgccagtgtgaaggcggcgatAGTAGGAAGAAAAGAAATTGGCTAACCGgacagcctttacttcagagacaaacgtgggtcactttggaacacatgttataatgctcgcctagctgctagcgtggcacgccctcatactctgcttctgactggctagtagtccttacctaggtactgcgcatgtgcacctcccaacaaagatggaacagaagtgcgatgcctcactctgtagctaaaacggagagctcaacacacaggCGGAACTTTGAGAGTGCTAGACACATGCAGCTATAGGACAAGACTTTTAGACACTGAAGAGTTCAAAGAAAGAGAACACAGTCATCAAATATTGCCTGAAGACACAACTTTATTAATAAACCAGCAAGCAAAAGCATGTCAAACAAAACGTAAGATGCCCAGGAAACAGAGACAGGCATGTATAAAATACCCAAACAAACCATAAAAGCGGAGATGGGCAGCTGAAGCCTTGCCATCGGCTGTAAACAGAGCGACGGAGACAAAAAAGGAACAATGAAAGGAAAGAATGAGCAGCCGTAAAAGAGGCGGCGTGACGACGTGTGTGCTGAGGTTGTCATTTACATCCGCACAATAAAGACATTCACGAGTGTCTGGTAGAGCGCAGGGACTGGTCTGCTGGACTGGAAACTACTGTGGCAACAGAGGCAAGAGGTGCTGGACTGTTTGTAAGTGATGCCTCAGGTTAATAGTCTGACTCAAGATACTGCTGCTGTTGTGACACTACAGTGAGTAGCAGAATACAAAACACTGATAATGCTGGTTATGGTCTTACTCTGCTCCCTCGGCTCTCCTGCAGCCAATAGCTGGCATTTctgagagaacagagagaaagagagagaaaggacacTGTTCACCCATCAGCGGTAACATGTAGCATGGTTTCACACAGGTAAAGTGTTTGGATTATCTggtccagtggtgtagtctgtattgtagtgggtatactgtactgtatatgtatgggccAGGATGGGGggccatatcatagtggggggtctgggtgtcctggGTGTGAacattttgagcgtcaaagacttcatttcctgcattctgacacacttttatgAACCAATTTACAGCGGAAATACCTTTAATCAGCCTAcgcgaagaagaaaaaacagatgacaattcaaaatatatcaaaataataatgcaaagtatgttgttacatgtcattggccatttttaagtgggtatatggaaatcctggagctttcttaatgggtatactgcgtatacctgcgtatcacgtagactacaccgctgATCTGATCCACTGCTAAAAAGCATCTCAAAAGCATTAGAGATGGACTGACATCCCACTGCCAAACGACCTTGGGACATTTGAGATGTTTAACAGGTGTGAATACATCCATCTCTCTAATATGCATACTCAATCTTTATTCTTCCCAAGTGCAACTGTACGTCAGTAAATGGTCTGTTGAAATTGCCTTTACAGGATCTGCCCTCCATTGTAACGACAGCTGAAGTGACACTGATATTACGCTGAAATAACGCTGTTGTTCTTCCTGTCACATGCAAAGTGACAGGGAGAAAATGGCTCCATCAATTTCTTTACATATTTtatgggggcattttaggcctttatttatacaggacagctgaatacatggaaggggagagagaggggggaatgacattcaGCAAATGGCCTAAGGgcagagtcgaacctgcggctgccgcgtcgaggagtaaatctctatatatatatatgggcgcctgctctgccaggtgagctacccaggcgacCCGCTCCGTCAATTTCAACACATACAGAAAGTAGCATGCTGCTGATTAGTACAACCTCTTAATGATGAGTCAGAGTCAGGGGCGGATGGGACAAAATTTTGGCCCTGGCAATTCCGTTCCTTACTGGCCCAATTTCAGACGGGGGACATTTTCACTTTATAATTGCATAAACCAGGCCCACCTGAGATTATGGCACCAGCAGCATGAGGCGCACTTACAGGCTTTCATAATTACATAATACACAGACTGAAGCAATTCGTAACACCGTCAAATAAACTACCATGGCACCATCTTAGAATAGAATGGAGATGCTTCCATATGTGAAACATATCATAACATACttaaacacccaaaacacaaaAGTACGAAGATGCACCGCACCAactagcttttattttgaaaagtagaagccCGACGGCACCAGACGGGCGGCTCCAGGCTGCAGACGTACAGTCTTGcatatttttgtcaatttttgagCGATACGCCAGTGccgcatttttttccttttttccaggAGCCCAAATCGGCCCTTCTGGCATTCGCCAGAACTGCCAGATTGCCAGTCCGCCTATGGTCAGAGTCAGTCTGTGCACACGTTATTAGCTACTTAGTTAAACTGTTGTTGTGACTAAATAAAGAGCACAAGTCATtcttcttttagtttttttagctGTTACCGTCAGGGTTATTATaacaaactaaaatgaaaaataagcagtgaaaaaatgtgcttagaaaaataaaactacagtGAAACCGTATTGCCAGATTAAAAATggaacgaaaatcaaataaaaatgagaGCAAATCATTTCAGTATAAGTTCTTTACAGAAATTAAACCGAGTTGACATTCCAGCAGATGGCGTTTGCAACTGCTTCATATCAGACactaaaggccgttttacagtcgcCGCATCCGAGCTGGCGCGCaccatcgtgacgtcaaaatgacgtagatcttgcCGGCGCGCCCAGATTTATGGTGCGCGAGCAGAGGTCGAGCACCACTCTTTTTttaaagcggaaacaggaggcctgaacgAGTTCACCGACAGTTCTcagtgactgcaagtctgtcttgtaaacttacagggttaagatgagttcttttatgaatgaaaggcttgatccgaccaagtagctcatccaatcaaAACGAAGCATTggcgtcaatgctgctgccggTTCtaccgttgtttacctttttcttcttcttctagtctgtagaaagagcaaagtcggtagcctttcctcattagcgccacctctgttcaggagaagactgcagACAAACTAAAATCCCTGTAAGactaaaactaaatatatacaaaataaaacaaagtaatTCTGAAAAACTGAAAGTAAACTAAAACTAGTAAACCCACTCTGAAAAccaactaaaactaaactaaaatgaaattgaaaattcaaaactataataaccttggttaCAATACAGCTTCAGGTGCATTACCACCACCCTGTGGACTGAAGTGCCGTTGCTAATTGGCATGTAGCCCGGAAAATGGAGACTGTAATCAGATCTGTGATCTGGCTAACGGAGATTCGTAGTCTATATGTGGCTAAGTGAAAACAAAAGTGTAATTAATCAGGATAGGACACAATTGAAATGACAAGTGTAAAAAGGGGGaaatcctgtgtttgtttgacccatacACCGCCCCAGCTTGCCTCCTGATATGGAATTTGGCGCTCATATACTTCCATGCTGATCccgtcataattactacggcAACTAGAGGGCGGTGCCACCTGCAGTAACAATAAAACGTAAATATGGGGGAGGTTCTCGTCAGATCTTACCACTGTGTTATTGTTGATTTCACCACTGAGGGGCTGcaacattacacattttttaattctacacttaggctacgttcacaccgcaagtcttaaggctaaattcagatttttttgctcagatacgattttttgtttggctgttcaatgaccttttaaaatgtggcctatatcacgctgttgcactaaagttagggaggttatggaggaaggaagcattttcgcttttatttcaaaatgtttgtgtaatggcagccataacattaatgaacaggtgctgaggaggagaatgaagagaaagagagccaaattggatattaattttactgtctgtgtctatgccGGTGCATAATTCGgacaaatgtcgatgtagattgacgtaaaagtttcatcaaatccgccttggttggtcacactgcggccgcattgaaataaaaatcagacctgggtctgattcaggaccacatatggaagtggtctaaatctgatttgaaaaaaatcagatgtgggcaagatttgagtggtcacactacttctgaagaagtctgacctggtcacttgaccccaaaaaaaatctgatttgggccacttttccctgcagtctgaacgtagccataTAGTGGGTGTTAAAGATCATTGATGAATCCTTGAATTGAATGGCTAAGTCGGTCTACAAACCCTGATGCATTCTGGTTGTATAACTAAGCAGTGATAAGACaaaactctccctctctctctttctctttttctctctctaacacacactcacctacaTCCATACGCGCACATAAAGCTCATACATAGGTGGCGATCAGTGATGGAGGCTGAAAACCCTGCAGCActttgagcaaaaaaaaaaaaacaatgagcacacacacaacacggcAATCTCCTGTGTTGTGACACTGAGCTGCTGGATCGGTTGAGGCGTGATTGGCTTCTTCTCTACAGGTTTGGCTTCACCTCTTACAGTTACCTTCCATGCGTCTACCTGGCTTGAAACCACTGCTGCGTCATGACAACAGCTAATGCACTCAGTTTGAGGGTTGGACTGATATACCGGTTTGACAGATTCATGGGCAGATACAGCATTAGTGTTGCGTGGAAACCCTGTGATTCTATTTGAACAGTTTGTTCAGTTATAATATAATCACCATATATAGGCAAGTGAATTCCTCACTTACAGGCAGTATTGCACTTTAGTTTCCTCACCAGTAAataggtgtgcgtgtgtggccCGACCTATATAGCTACTGACCTCCGATAAAACAGTTTGAGCCCCTCTGTAGAGGTCTAGTGTTTGATGGCGGTGTAAATGTTTCTGAGGGTTTATCCTCCTGACAACCACAAACATTAGACTCAATCACTGAGgctatgtacagatatgtgtggCTGATCAACGCTGCAAATAACAAGTCAGAGTGATATGTCTGTTCTCTAACGGGCTTTGTTGTGTGGAGGGTGAACTCGAGCAGACTAATGCCTGGATAgtacctttgttttttttggttccacctcggtcgaggttccaagcgagctgagcctATATTACTAGAAGGTAGAGTTACAATGCAGACCAGTCTGCAATgcagactagccagaccttcctccacaggtctggctagtccacacagtattatgggatgggagaaaaacatgctctggtttatttgcatttctttaaaccaatcccaatcgtcaTGGATGAAGCCGCGGTGCAGCTgctgtggggtgggggggggatatgctaaccatggcactgtgtgCTGTGGCACAAATGCTTGCTTGTGGGAAATTGttaggtctttgtaaattatagaatgtggtctagacctactctatctgtaaagtgtcctgagataactcctgttgtgatttgacactattaaTACAACTGAATTGAAATTGATTTAAAATAGACTTGAACTTGTTTTTTTGGTGTTGTCCATGTCTTCATGTTAAACTTGACCctttcactgtgtgttttcactccGTCAAAGTTTTATTGGGACATTTTGGTTGCCTAAAAATCTCTCGTTCAGCGTTCTGCCAGCCAAATTAGCTAGCATTCATTCTTTTCAAGCATCTGGCTTTTCAGCTATATTGGTGTGTGATTTTCTCTGTATTTCAGTCACAAATATCTGCACGTAGCTTGAATCCCTGTTATGAACGCGGTCATATTGTGGGAGattttgaaaagaaatgttGACCTGAATACTTCAGCTCAAAAGTATTGATATCGGCCTTCAAAAAACCCTATATCAGTCGAACCCTGGTtactatatacacatatacatacacagcaGTGGGGACATACTGTGGAGGTAGGGGTTGAGGGAGGTTTGGTTTAACTATCGGCTGAGAAATTTCAATAAATTCCCAATAAAATCTGGATTGGTTTTGATCAGTCCACAAAGGTGGAATTTTGGATGTCTTGTTGACTTGAGACAGATTGCATTCTGGGAAAAGTCTTGGAGTGTAATCCCACTGTCAGACTGTACCATTGGACTTCAGACATATTGACTGAATGGAGGTGTACAGTAGGAGCGTGGGTTTGGTCAACTGTACTGGAGCCGATCCGTGAGGGTAGAGAGTGGCGTCAGGTGCTCCTCACAGGCAGAAGTCAAAGGTCAAGTCGGACTTGCCCATCTTCTGTCTGTACACAGCGTCAAAGTTTTCATTCATAGACACAGTGAAGACATCCTTCCACAGACCTGCACGACCTGCAGGCAGGATACACAGGGACAGGGACAGAATTTTAAATTTGAATAAA

Function

GO:

id name namespace
GO:0021591 ventricular system development biological_process
GO:0021592 fourth ventricle development biological_process
GO:0031589 cell-substrate adhesion biological_process
GO:0030902 hindbrain development biological_process
GO:0007160 cell-matrix adhesion biological_process

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU312293 True 6768 lncRNA 0.43 3 25184812 25191943

Neighbor

gene id symbol gene type direction distance location
mpped1 mpped1,LOC103131679,LOC106525904 coding upstream 71619 25011234 ~ 25113193 (+)
scube1 scube1 coding upstream 192647 24869947 ~ 24992165 (+)
LOC120553142 NA coding upstream 349067 24830198 ~ 24835745 (+)
LOC120553386 NA coding upstream 396059 24773501 ~ 24788753 (+)
LOC120553387 NA coding upstream 434984 24732196 ~ 24749828 (+)
pnpla3 LOC103361965,LOC104964946 coding downstream 26597 25218540 ~ 25241938 (+)
LOC120553672 LOC103361951,LOC100711848,LOC101487241 coding downstream 52594 25244537 ~ 25260350 (+)
ttll12 ttll12 coding downstream 72053 25263996 ~ 25349341 (+)
LOC120553526 NA coding downstream 200489 25392432 ~ 25400207 (+)
LOC120553524 dennd5b,LOC102198357 coding downstream 210412 25402355 ~ 25491732 (+)
G230192 NA non-coding upstream 386071 24795953 ~ 24798741 (+)
G230109 NA non-coding upstream 699295 24482310 ~ 24485517 (+)
G230011 NA non-coding upstream 920747 24260059 ~ 24264065 (+)
G229994 NA non-coding upstream 1068691 24112965 ~ 24116121 (+)
LOC120553514 NA non-coding upstream 1089647 24088025 ~ 24095165 (+)
G230260 NA non-coding downstream 159934 25351877 ~ 25352174 (+)
G230259 NA non-coding downstream 184404 25376347 ~ 25377601 (+)
G230327 NA non-coding downstream 244208 25436151 ~ 25494355 (+)
G230336 NA non-coding downstream 303205 25495148 ~ 25495399 (+)
G230337 NA non-coding downstream 307904 25499847 ~ 25500209 (+)
G230148 LOC102781993,LOC101465723 other upstream 406554 24620812 ~ 24778258 (+)
LOC120553083 NA other upstream 870105 24309542 ~ 24314707 (+)
LOC120553686 LOC105929833,LOC107382334 other upstream 1239172 23934300 ~ 23945640 (+)
adm2a NA other upstream 1336188 23833018 ~ 23848624 (+)
kcnc2 kcnc2,LOC100689973,LOC101475944 other upstream 1744149 23315421 ~ 23440663 (+)
LOC120553523 NA other downstream 170939 25362882 ~ 25373996 (+)
msrb3 msrb3 other downstream 449897 25641840 ~ 25662819 (+)
LOC120553706 NA other downstream 618464 25810407 ~ 25812828 (+)
arhgef39 arhgef39 other downstream 846245 26038188 ~ 26106823 (+)
mrps33 mrps33,LOC106591474 other downstream 1180771 26372714 ~ 26381109 (+)

Expression


Co-expression Network

Homologous

species gene id symbol gene type chromosome NCBI id location
grasscarp (Ctenopharyngodon idella) G403248 NA non-coding CI01000287 null 39439 ~ 41714 (+)