G230406


Basic Information

Item Value
gene id G230406
gene name NA
gene type non-coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053134.1
NCBI id CM020931.1
chromosome length 29109922
location 25650658 ~ 25952405 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>TU312516
gcgcggccagcgagcttgttacaccagcaatctgttacctcatgttacacacatgtcacgccacttatacaacatctaactaaatgtcttataaagctaacaacggtgtccgatttcaagttaatgaatatttgtggagagtaggtgtttcgttagctgcaactgtcccttcaatcctaatTAGctatgtagctacaaatcacggatagtaattttcggcgtaattcgattatatttacagtttgaatttcgtcacgccacgtatacaacatctacctaagggttttataaagctaacaacggtgtccgatttcaagttaatggatttttgtgaattccagaggaattctaagaggaggctagctagctctcattgatagagctacatccagctgcaggctctatcaatgagactcgcagacaagcggcgtttatttccccgatcgtttgtttaaataactcaacacattataattacacacattaaaagattaactagaacctgtggtaacagattgctggcgtaacaagctcgctgaccgcactctcgctcacacacacctggcattaggaagaggggaactgcaggccctggagctctgtcagggcagcggcgtttagtAGTCATTCAGCCACAAagcagtgactttgcgcgggtataaagtgccgtgggctgccagccttgacggagctcaatcgagctcacagcaggccggggtcagtgaaggaaggcaggccaggcggcgaggcagcaacacaggcagcaccggcagctgaactccgacacacagtcggacaaaatttgcaattagatatacatttttgtaaaacggcccatatttgacctctacgttgttgatttctcgcataaaaaaagtctcagaagtgaattgaatggtaaaatagcagatgaacaacagatgaaatactgtataatttctgagatctgcacgacctaggctatgtttacacggaaacgatctgaagagaaaacgcaaaagtggtgttgcgttatcactttttattctgcgtttagacgagtgttatggaggggaaatctgcgtgcatatggtgacgcaaaagtgtgtgaaattcgatgtagtatgcactccaggtgactaggtggcactgccacacaacaccaccaaggcaCCCACCTGCGtagaaccatagacagtatagaacattcattctacttctctccttagtagcgcgaaaccaaaacatgccgaagcgaacaacaaaagctcgtctggaaagacgaggaggtggagttgcatgtttgtctgatgatgaccggcacaattgaccgtgataagccacaacacagcacccacgggagcactaccaataccctgagcctcgcggcccttcagccgctgcttgagagtgagaggcagcgggcagaggaggctgaagcagaccctcctctgcccgctgaccTCTGCCCTCTGCCTGCTGACCGCTgccgctcgctctctctctctcttcatccgtaacgttgtcgcctgctctggctcaaacgaatagcctacatatcatcatcgaactataacaaccttatccacattgttgaaatcatttaaatattgagccattacattgaaattctaacaggagcctaatttctgtagcctactccgtaacgcctttttctcgtctctctccacaccgctgtcttcagacttgtgcgtttttaccctttagacggtaacgcgacggtggagcgtttttaagatttccactctggagggtggtttcacttttttgcgtttttaagccccaaaaacgccgtcggCGTATAAAgaaaggcacatccgataaaatattttttcgttttcacccgagagcgtcatcgtgtaaacagggccctagattcagaagactaactgatctcgggtcagttgtgtagcctatgcaaatgttggggcgtgacaaacacagactagagccaaatgaggag

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU312516 True 1963 lncRNA 0.47 2 25650658 25952405

Neighbor

gene id symbol gene type direction distance location
lemd3 lemd3,LOC104964688,LOC106576661 coding upstream 10568 25621443 ~ 25640090 (+)
tmbim4 tmbim4 coding upstream 36213 25608506 ~ 25614445 (+)
cdnf LOC104964768 coding upstream 76636 25568539 ~ 25574022 (+)
prl2 LOC104964766,LOC103356682,LOC100697904 coding upstream 97657 25546940 ~ 25553001 (+)
LOC120553524 dennd5b,LOC102198357 coding upstream 158926 25402355 ~ 25491732 (+)
il17ra1a NA coding downstream 193502 26145907 ~ 26158913 (+)
LOC120553199 LOC104965315 coding downstream 263736 26216141 ~ 26219357 (+)
cnot4b NA coding downstream 270384 26222789 ~ 26253935 (+)
braf braf coding downstream 434410 26386815 ~ 26427044 (+)
aebp2 LOC103362558,LOC104950851 coding downstream 1066957 27019362 ~ 27044417 (+)
G230404 NA non-coding upstream 31399 25618202 ~ 25619259 (+)
G230401 NA non-coding upstream 33987 25595592 ~ 25616671 (+)
G230339 NA non-coding upstream 146222 25503664 ~ 25504436 (+)
G230337 NA non-coding upstream 150449 25499847 ~ 25500209 (+)
G230336 NA non-coding upstream 155259 25495148 ~ 25495399 (+)
G230488 NA non-coding downstream 103118 26055523 ~ 26055735 (+)
G230510 NA non-coding downstream 173627 26126032 ~ 26126398 (+)
G230520 NA non-coding downstream 218983 26171388 ~ 26173594 (+)
G230521 NA non-coding downstream 221241 26173646 ~ 26174741 (+)
G230525 NA non-coding downstream 227138 26179543 ~ 26180016 (+)
LOC120553523 NA other upstream 276662 25362882 ~ 25373996 (+)
G230148 LOC102781993,LOC101465723 other upstream 872400 24620812 ~ 24778258 (+)
LOC120553083 NA other upstream 1335951 24309542 ~ 24314707 (+)
LOC120553686 LOC105929833,LOC107382334 other upstream 1705018 23934300 ~ 23945640 (+)
adm2a NA other upstream 1802034 23833018 ~ 23848624 (+)
arhgef39 arhgef39 other downstream 85783 26038188 ~ 26106823 (+)
mrps33 mrps33,LOC106591474 other downstream 420309 26372714 ~ 26381109 (+)
LOC120553759 NA other downstream 740951 26693356 ~ 26971853 (+)
LOC120553194 NA other downstream 1116672 27069077 ~ 27072552 (+)
G230842 NA other downstream 1650600 27603005 ~ 27603702 (+)

Expression


Co-expression Network