LOC120553706


Basic Information

Item Value
gene id LOC120553706
gene name NA
gene type misc
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053134.1
NCBI id CM020931.1
chromosome length 29109922
location 25810407 ~ 25812828 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>TU312545
AGTTTGTTTTTATGCAACAGACCCAGACTTCACTCCACTTCTGTAGAGTCACCACAGAACTTGTAAACCAGCAGAGATGGCAACGCTGATGGAAGATGAGGTATTTATGGCTTTCACCACCTACGCAGCTATTGTCATTGTGAAGATGTTGCTGATGGCGCCCATGACTGCATACTACCGCATGACCAGAGGGGCTTTCGCGAACGAGGAAGATGTGGCCCTGAAGcctgaagaggagaggaagaagctgTTGAGAACCCATCCAGATGTGGAGCGAGTTCGAAGGTGAAATGATCAACCCCCTAAACTTGAAGTTATGGTTTGATACAATGGTGTCACCAGAATGACCTGGAGAGCGTTGTTCCCTTTGTGATGGTCGGCCTGCTCTACGCGCTGACTGGACCCGAGCTTTCTACTGCTCTGCTTCACTTCCGTGTGTTTGCCGGCTCTCGGATCTTCCACACCATCTCGTACGTTGGCGCTCTGCCTCAGCCCAGCAGGGCCCTGTCCTGGGTAGCAGGCATGCTGGTCACCTTCTCCATGACTTACAGGGTGCTTAGCACCGTTCTCCTCCTTTAGAGACAGCATTGGACTCTAACAAAACCTTATctgttaattaataattaactcTTGCTGCAGCTATCTATGAGCTTGATTATTAAACATCCTTAGCACTTATGCTTTACATTTTCATAGATggaacatttctttttaataaact
>XM_039792399.1
CAGTTGCAGTTGTCCCGCCTCCTGAAATTCCGGGTGAAGGGTCAGTTTGTTTTTATGCAACAGACCCAGACTTCACTCCACTTCTGTAGAGTCACCACAGAACTTGTAAACCAGCAGAGATGGCAACGCTGATGGAAGATGAGGTATTTATGGCTTTCACCACCTACGCAGCTATTGTCATTGTGAAGATGTTGCTGATGGCGCCCATGACTGCATACTACCGCATGACCAGAGGGGCTTTCGCGAACGAGGAAGATGTGGCCCTGAAGcctgaagaggagaggaagaagctgTTGAGAACCCATCCAGATGTGGAGCGAGTTCGAAGGTGTCACCAGAATGACCTGGAGAGCGTTGTTCCCTTTGTGATGGTCGGCCTGCTCTACGCGCTGACTGGACCCGAGCTTTCTACTGCTCTGCTTCACTTCCGTGTGTTTGCCGGCTCTCGGATCTTCCACACCATCTCGTACGTTGGCGCTCTGCCTCAGCCCAGCAGGGCCCTGTCCTGGGTAGCAGGCATGCTGGTCACCTTCTCCATGACTTACAGGGTGCTTAGCACCGTTCTCCTCCTTTAGAGACAGCATTGGACTCTAACAAAACCTTATctgttaattaataattaactcTTGCTGCAGCTATCTATGAGCTTGATTATTAAACATCCTTAGCACTTATGCTTTACATTTTCATAGATggaacatttctttttaataaacttttCTATCAAC

Function

GO: NA

KEGG:

id description
K00799 GST, gst; glutathione S-transferase

RNA

RNA id representative length rna type GC content exon number start site end site
TU312545 False 721 lncRNA 0.48 4 25810450 25812817
XM_039792399.1 True 728 mRNA 0.49 4 25810407 25812828

Neighbor

gene id symbol gene type direction distance location
dera dera coding upstream 30792 25768737 ~ 25779615 (+)
hmga2 hmga2 coding upstream 56592 25695881 ~ 25753815 (+)
lemd3 lemd3,LOC104964688,LOC106576661 coding upstream 170317 25621443 ~ 25640090 (+)
tmbim4 tmbim4 coding upstream 195962 25608506 ~ 25614445 (+)
cdnf LOC104964768 coding upstream 236385 25568539 ~ 25574022 (+)
il17ra1a NA coding downstream 333079 26145907 ~ 26158913 (+)
LOC120553199 LOC104965315 coding downstream 403313 26216141 ~ 26219357 (+)
cnot4b NA coding downstream 409961 26222789 ~ 26253935 (+)
braf braf coding downstream 573987 26386815 ~ 26427044 (+)
aebp2 LOC103362558,LOC104950851 coding downstream 1206534 27019362 ~ 27044417 (+)
LOC120553708 NA non-coding upstream 9098 25797989 ~ 25801309 (+)
G230418 NA non-coding upstream 21151 25788606 ~ 25789256 (+)
G230417 NA non-coding upstream 32773 25777011 ~ 25777634 (+)
G230415 NA non-coding upstream 87921 25721653 ~ 25722486 (+)
G230404 NA non-coding upstream 191148 25618202 ~ 25619259 (+)
G230488 NA non-coding downstream 242695 26055523 ~ 26055735 (+)
G230510 NA non-coding downstream 313204 26126032 ~ 26126398 (+)
G230520 NA non-coding downstream 358560 26171388 ~ 26173594 (+)
G230521 NA non-coding downstream 360818 26173646 ~ 26174741 (+)
G230525 NA non-coding downstream 366715 26179543 ~ 26180016 (+)
msrb3 msrb3 other upstream 147588 25641840 ~ 25662819 (+)
LOC120553523 NA other upstream 436411 25362882 ~ 25373996 (+)
G230148 LOC102781993,LOC101465723 other upstream 1032149 24620812 ~ 24778258 (+)
LOC120553083 NA other upstream 1495700 24309542 ~ 24314707 (+)
LOC120553686 LOC105929833,LOC107382334 other upstream 1864767 23934300 ~ 23945640 (+)
arhgef39 arhgef39 other downstream 225360 26038188 ~ 26106823 (+)
mrps33 mrps33,LOC106591474 other downstream 559886 26372714 ~ 26381109 (+)
LOC120553759 NA other downstream 880528 26693356 ~ 26971853 (+)
LOC120553194 NA other downstream 1256249 27069077 ~ 27072552 (+)
G230842 NA other downstream 1790177 27603005 ~ 27603702 (+)

Expression


Co-expression Network