G230450


Basic Information

Item Value
gene id G230450
gene name NA
gene type non-coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053134.1
NCBI id CM020931.1
chromosome length 29109922
location 25641794 ~ 25650573 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>TU312581
agtccctgctgtgggctgccagccgtgacggagctccaagtacctcatagaaggccggggtctgtgaaggaaggcaggccgggcggcgaggcagtcttaccaaatttgcaattagccatcaattttcgtaaaacggcccatatttgagctttatatagttgatttctcgcttaaaaaagtctcagaagtgaatttaataacgaaatagcccgacaaacaattttgcagtgtctgaaatatgagacctgctgtccagtctcccatatgtttctatgtagtttgctcaaaccaatcagcgcgtagctcatttggaacattaggagaccttaaggaacagtgtaaaataccctaaataatcattctatcacccctttaaaaaaatgtgaataaaaCCAAACAGCTGAACAATAAAGACTAAACACTGCCATCAGTCAAATGTccgattactccacattgtcattgtgataaaATTCTGACTCTGCCacattctctgtcaggtaaatgtagtagtacaatgttttcctctgatagaagtacactgtaagtcagtagtaggctatacagtacagtggagttgcatattaagtgctttGGGGTCTTTCTGTAAGTAATTCTGTAGTACAATTTGGTTCTGGAGAATGctacaaaaaaacaccatcacaAGCgaaagcaatcggcccgttccaaacggGGACATTTTAAAAGGGGGACTCATAATATGATACAATACGCACTAAAATGATCAAAAGCATTACTATTTTTGAACCTTCACTGTGCAGAACGATGCATGAGTTTGAGCTTGAAGAAGGCTGTGTTGCCATTCATTGAGAATGTTGCACTGTGCTCACCTTGAATATGGCTTTAAGATGTGGATGTGGGAGCAGGACTTTGTGACATTAAAACTAGTTTGTAAGTGGGCTCTGTGCAGGCCAGTAAGCTTCCttcaaagacagagagaaacgcTACAGTCACACCAGGACATGTTGACACCAAAGCTAACAGGTTACTCTACCTAGAAGAGCAGCAGGCAGTGCAGGGTGGCAGACTGAGTTGCTGCCTTGCGCAAGGGCGCGATGCAGGGCCACGAAAAGTCCACGTCTGAGGAGGACAGCCATGAGAAACACAGTCACACtgaaAAGAGCAGCAACAGGAAAGCAGCGGTGACAGAGAAGCGTTGTGTCGCCAGTGTTAATCTGCAGGTGTCCAAGGCTAACCCACCAAGGCTAACCCACCACAGCCTTCCCGTTGACCGacagactgtgtgtttgtgtacggtTGGAGTGCCTCAACATCTCCAATTATGGACAGGACCCTAGCCTCGTCACAGCATGATGTAACCGGACTACAACGTCTTCTTCAACAATAAATGACATggaattatattatatataacttTAAAAGGACAAATAAGGA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU312581 True 1413 lncRNA 0.44 2 25641794 25650573

Neighbor

gene id symbol gene type direction distance location
LOC120553116 NA coding downstream 35206 25603394 ~ 25606588 (-)
irak3 NA coding downstream 47696 25577463 ~ 25594098 (-)
hspa14 hspa14 coding downstream 74364 25557242 ~ 25567430 (-)
rint1 rint1 coding downstream 116838 25502533 ~ 25524956 (-)
LOC120553669 NA coding downstream 457309 25113999 ~ 25184485 (-)
lmo3 lmo3,LOC107550907,LOC107757261 coding upstream 206067 25856640 ~ 25902001 (-)
rergla rergl,LOC104934027 coding upstream 463227 26113800 ~ 26120318 (-)
LOC120553108 LOC106676404,LOC106675180,LOC106675933,LOC106633052 coding upstream 478241 26128814 ~ 26140034 (-)
tmem121b cecr6,LOC102790305 coding upstream 518536 26169109 ~ 26171253 (-)
tmem178b tmem178b,LOC107725619 coding upstream 611052 26261625 ~ 26364669 (-)
G230440 NA non-coding downstream 23350 25618178 ~ 25618444 (-)
G230433 NA non-coding downstream 64898 25574924 ~ 25576896 (-)
G230386 NA non-coding downstream 86480 25555115 ~ 25555314 (-)
G230370 NA non-coding downstream 128223 25512926 ~ 25513571 (-)
G230369 NA non-coding downstream 128943 25512142 ~ 25512851 (-)
LOC120553546 LOC107747503 non-coding upstream 37704 25688277 ~ 25690733 (-)
G230541 NA non-coding upstream 475460 26126033 ~ 26126401 (-)
G230548 NA non-coding upstream 510918 26161491 ~ 26162952 (-)
G230533 NA non-coding upstream 513385 26163958 ~ 26165801 (-)
G230550 NA non-coding upstream 516768 26167341 ~ 26168381 (-)
LOC120553115 NA other downstream 40414 25595578 ~ 25601380 (-)
sult4a1 sult4a1,LOC102784496 other downstream 424101 25191261 ~ 25217693 (-)
G229950 gdi2,LOC100708443,LOC102215003 other downstream 1727102 23908556 ~ 23914692 (-)
LOC120553046 NA other downstream 1777820 23858219 ~ 23863974 (-)
G229907 NA other downstream 1941596 23699697 ~ 23700198 (-)
mkrn1 mkrn1 other upstream 520747 26171320 ~ 26196510 (-)
G230594 mrps33 other upstream 725119 26375692 ~ 26381365 (-)
G230730 NA other upstream 1466633 27117206 ~ 27118597 (-)
ipo8 ipo8 other upstream 1851527 27502100 ~ 27550712 (-)
LOC120553767 LOC104927640,LOC103363517 other upstream 2690509 28341082 ~ 28430526 (-)

Expression


Co-expression Network