G230520


Basic Information

Item Value
gene id G230520
gene name NA
gene type non-coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053134.1
NCBI id CM020931.1
chromosome length 29109922
location 26171388 ~ 26173594 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>TU312656
GTAACATTAACGTTCAGAGtagtgtttgtgtccacctgatgaatgctAGTCCAATATtggctctgttttggtctccaccagctCCTGGGGGAAACCTCTTGTCTCTTCAGCTGCTAAACGCTGCTCTGAGCAGATGACAGTGGAGTtgtactgctgtttttttttttttactctggaATTCAAACAGACAAAAAGATTAAGACTCCACACAGTACAGAGGTTGATAATAAACTTTTAATTTCAAGTTAAGATGGATGGCTGTGGAACATAGAAAACACACATTTCAGTATAAACATATGCATTCCAACGGAGTTTAACAGGTTGTCTCGGCAGCAAAGCATTACTCAGCGAAGCCAACAGAGAGCAGTGAACCTACACTTCACACTGGTGGTTGTGGTCAATTTAAAGCCTCAGTCTCAGCTCCATGATTCTCTGCACTGCAGGTCTGCTGAGGAGTTATAGGGTGGACTCTTATAGCCTGGTTCTGAGGTACAACCGGGTGTTCCTGATGCTGAGATTCAGGATGGGGGAGAGTGGGGAGGGAACAAAAGAGTTTAAATAAAAGTTCTTTATTTAGTCTCTGACTGACGTAGCAGTCATACTGATATATGGAGCCAATTGGACCACATGTAGTTCTATCACAGAAAACCAAAAGTATCTGGAAAACCTGACGTAACATTTCACATTAATTGCACAATAAATTCATTCTTCATTTAAAAGCAGAATCTTTCCCAGATTACTTCAATAGGCGAcaggtgtctctgtgtgtgagagacaggaAGGAGGGGGTTGGGGGTGGGCGTACGCAGGATGTTTTACCCATAGCCCTGATCCAGGACCTGTCATACAATGTATAAGTGTCCTCTCTCACGACGCTCGAGTCCCTGAGCAGGCAATAAAATGCGTTACTGAAGACGGCGTGTGTGTGCTCCGTGCTGCCACTGGTGGCTGGAAGATGTGGAAAGGTGAGTACCATTGTGTTCAGTAGTATAGCTGTAATACGGCTTCCGGCCACCAGTGGCAGCACTGAGCAGAACTCTCTGGGATCAAATCAGTATCATCTGATCATCATCTGATCATCATCAGTTCAAACCCTATTGTTGTAGATCAGCTTTTGTAAAtcttgttgaaatatttcaaccaTTTGCTGCGTAACAAATTTTACGAGCTGCTCGGTCACTGAAATGACTTGAGTTACAAAGATGGCTATTGAGGATCAGGGTGGTCATCCTGCTTTAAAAATCAGCCACAAACCTTCCAAGAGTTTCATTGTTTGGGCTTTGATGGACAGTCTGTGTCCAATTATGATCTGAATGCCTCATCAGAGACTTTTTGTAaccctgaaaagaaaaaaagaaaaaaaagtggccACAGTGAATACTTTTCAGTACAACATGAAAATGATTATGGTAAATGTATTTAAACATCAGCACAATATATTGGCCATCAGCAGCTttaataaagaagaaaaaaaaataaaataaaatgaagtaaAATCTTACAACATGCCCATCACGATTACAGTATATGGTGCTGAGTAAGTTGGAGTGCATCCTCAGAGTCTCAGAAGTACGTTATTAACACCTGGGTAGACGATAAACCAGTCAAACCCACACCCACAAATAAACTTGACAATGTTTATTAGCATTATTTGAAGAAAGTTATAATTTTGTAGTTAAATCTTATATCGAGTTctttttgtgtcattttactgtttttccTTTCAACATGAACCGCACAAGAAAGACCCACGAGGATAGAAGTCTAGAAAATGTTTAGCACGAGCGCACTGACTTGTACtagaattttttttgtctttttttccttttaaagttCATTTAGTAATGGCCTGCTTAAAGGCACTGCCACAATACAAGGGGAGTGCgggtgggggagggaggggggggggagctaCTGTCCATCACTCGCACAAGACAGTCCATTCTAGTGTGTAGTATACACGAGggtgggggagagagggggtggggggagagaTTGGCGAGGGGGGCCGCTATAGGTAAATCTCATAGAAATCGTCCAGTTCCTCGTGAAACAAGTCCCACTCATCCTCTGAGTCCGTCACCTCGTCGTCGGTTCCTGCAgccagcagcatcagcagcatCTCGCTCAGCTCAAACGTCACCATCTCCTCGTCCTCGTTGTCAAATGAGTCGCTGCTTTCCCGCTCGTCGAAGATATCCCACAGC

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU312656 True 2207 lncRNA 0.43 1 26171388 26173594

Neighbor

gene id symbol gene type direction distance location
il17ra1a NA coding upstream 12475 26145907 ~ 26158913 (+)
dera dera coding upstream 391773 25768737 ~ 25779615 (+)
hmga2 hmga2 coding upstream 417573 25695881 ~ 25753815 (+)
lemd3 lemd3,LOC104964688,LOC106576661 coding upstream 531298 25621443 ~ 25640090 (+)
tmbim4 tmbim4 coding upstream 556943 25608506 ~ 25614445 (+)
LOC120553199 LOC104965315 coding downstream 42547 26216141 ~ 26219357 (+)
cnot4b NA coding downstream 49195 26222789 ~ 26253935 (+)
braf braf coding downstream 213221 26386815 ~ 26427044 (+)
aebp2 LOC103362558,LOC104950851 coding downstream 845768 27019362 ~ 27044417 (+)
ndufa5 ndufa5 coding downstream 872472 27046066 ~ 27051282 (+)
G230510 NA non-coding upstream 44990 26126032 ~ 26126398 (+)
G230488 NA non-coding upstream 115653 26055523 ~ 26055735 (+)
LOC120553708 NA non-coding upstream 370079 25797989 ~ 25801309 (+)
G230418 NA non-coding upstream 382132 25788606 ~ 25789256 (+)
G230417 NA non-coding upstream 393754 25777011 ~ 25777634 (+)
G230521 NA non-coding downstream 52 26173646 ~ 26174741 (+)
G230525 NA non-coding downstream 5949 26179543 ~ 26180016 (+)
G230555 NA non-coding downstream 26653 26200247 ~ 26201227 (+)
G230563 NA non-coding downstream 85331 26258925 ~ 26259131 (+)
G230597 NA non-coding downstream 209097 26382691 ~ 26383656 (+)
arhgef39 arhgef39 other upstream 64565 26038188 ~ 26106823 (+)
LOC120553706 NA other upstream 358560 25810407 ~ 25812828 (+)
msrb3 msrb3 other upstream 508569 25641840 ~ 25662819 (+)
LOC120553523 NA other upstream 797392 25362882 ~ 25373996 (+)
G230148 LOC102781993,LOC101465723 other upstream 1393130 24620812 ~ 24778258 (+)
mrps33 mrps33,LOC106591474 other downstream 199120 26372714 ~ 26381109 (+)
LOC120553759 NA other downstream 519762 26693356 ~ 26971853 (+)
LOC120553194 NA other downstream 895483 27069077 ~ 27072552 (+)
G230842 NA other downstream 1429411 27603005 ~ 27603702 (+)
G230904 NA other downstream 1767727 27941321 ~ 27947473 (+)

Expression


Co-expression Network