G230555


Basic Information

Item Value
gene id G230555
gene name NA
gene type non-coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053134.1
NCBI id CM020931.1
chromosome length 29109922
location 26200247 ~ 26201227 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>TU312693
ccgaaacaaatttacaaatgacagattcttcacggaaagggaatgtaccacataccggaagtgatgaggttttgtatacatgtcgccttgactacggcagttatggatcgaatgcgtcaatagagccgccatcttggaacaggggaggcactcccttatatactgtctatgggccgtccttaatgcatcagcgtcaatgtaggcaaaggtctaacggaaataaaatcactataaatcgtcaaaatctcatgcgatgttctagtttttttaaacaaaaagacaaagagactaattaatgtgttaatacaaagaatatttattataatcagttcacagatgagtacaaacggaaacttcacccttctgaactaagaggttctgcttcaaagtgaagtttaaacactaatgattcatttatttctgcatgtatttatttatttaacgagactttaagtcgtgtttcgtcgtccacagtccgagtcccgccagactccctttaggaaacctgtgatttaaacttcagcaggctgtgacagtccgctccgttcagtcctggatctgattctcccgggcttcccttccctccagcgggcccagcaatacggcctgggtctccagctgcgtggtgtcggttttggctcccaggaatgggcagtgagctccaggtcctgcagctgcagacggactcagctgcccccctgctgtagcttcgatccggccgcggctgtcgatacgttccctgtttttccaatgtttccgtcaggtccgcgtcatataaaaactccaaacaccgaccacacgtaaagtcaccataaacttcattcacgccatatactcactcacaacaacacaaattgactgcgctcaccaacaacacctcatcacttccggtatgtggtacattccctttccgtgaagaatctgtcatttgtaaatttgtttcgggactggtaaaagtgttttgcatcttgttaatttgtt

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU312693 True 981 lncRNA 0.45 1 26200247 26201227

Neighbor

gene id symbol gene type direction distance location
il17ra1a NA coding upstream 41334 26145907 ~ 26158913 (+)
dera dera coding upstream 420632 25768737 ~ 25779615 (+)
hmga2 hmga2 coding upstream 446432 25695881 ~ 25753815 (+)
lemd3 lemd3,LOC104964688,LOC106576661 coding upstream 560157 25621443 ~ 25640090 (+)
tmbim4 tmbim4 coding upstream 585802 25608506 ~ 25614445 (+)
LOC120553199 LOC104965315 coding downstream 14914 26216141 ~ 26219357 (+)
cnot4b NA coding downstream 21562 26222789 ~ 26253935 (+)
braf braf coding downstream 185588 26386815 ~ 26427044 (+)
aebp2 LOC103362558,LOC104950851 coding downstream 818135 27019362 ~ 27044417 (+)
ndufa5 ndufa5 coding downstream 844839 27046066 ~ 27051282 (+)
G230525 NA non-coding upstream 20231 26179543 ~ 26180016 (+)
G230521 NA non-coding upstream 25506 26173646 ~ 26174741 (+)
G230520 NA non-coding upstream 26653 26171388 ~ 26173594 (+)
G230510 NA non-coding upstream 73849 26126032 ~ 26126398 (+)
G230488 NA non-coding upstream 144512 26055523 ~ 26055735 (+)
G230563 NA non-coding downstream 57698 26258925 ~ 26259131 (+)
G230597 NA non-coding downstream 181464 26382691 ~ 26383656 (+)
G230604 NA non-coding downstream 190411 26391638 ~ 26392178 (+)
G230600 NA non-coding downstream 227207 26428434 ~ 26432122 (+)
G230635 NA non-coding downstream 412725 26613952 ~ 26614172 (+)
arhgef39 arhgef39 other upstream 93424 26038188 ~ 26106823 (+)
LOC120553706 NA other upstream 387419 25810407 ~ 25812828 (+)
msrb3 msrb3 other upstream 537428 25641840 ~ 25662819 (+)
LOC120553523 NA other upstream 826251 25362882 ~ 25373996 (+)
G230148 LOC102781993,LOC101465723 other upstream 1421989 24620812 ~ 24778258 (+)
mrps33 mrps33,LOC106591474 other downstream 171487 26372714 ~ 26381109 (+)
LOC120553759 NA other downstream 492129 26693356 ~ 26971853 (+)
LOC120553194 NA other downstream 867850 27069077 ~ 27072552 (+)
G230842 NA other downstream 1401778 27603005 ~ 27603702 (+)
G230904 NA other downstream 1740094 27941321 ~ 27947473 (+)

Expression


Co-expression Network