mrps33 (mrps33,LOC106591474)


Basic Information

Item Value
gene id mrps33
gene name mrps33,LOC106591474
gene type misc
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053134.1
NCBI id CM020931.1
chromosome length 29109922
location 26372714 ~ 26381109 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>TU312731
GAAAAAGTGTCATGCGCGATACCGCTTGTGATGGTAGTATGGCGTGTGTGAAGGTTAACGTTAGTTAAAACGTTAGTACACTTAACTATACTTGTAATTTAACTCGGTTTTCAGTGTGTTTTGCTCACGTGTATAGGGTGTCCCGCTGAACGACGGTGTGTACTTCCTCACAGGCTAACTGTCGCAGGAAGGCATGGCGGGTCTGTCCAGCTACGCCGTGCGCATGGCCAGACTGAGCGCGCAGATCTTCGGGGGGGTCGTGCGTCCGACAGACTCCAGGTCCATGAAGGTGGTCCAGCTGTTCCAGGAGCCCCCCATGGCCCAGAGGAAGGAGGTGTACGACTGGTACCCACAGCACAAGATTTACTACTCCATGACCCAGAAGCTCCGCTTCATGGGACTGTTCAGAGACGAGCATGAAGACTTCAAGGAGGAGATGCGTCGCCTGAGGAAACTGCGAGGAAAAGGGAAACCAAAGAAAGGAGAAGGGAAGAGAGCGGGGAAGAAGAAATGAGCTGTTTTTCTCCCCCTTCTTTTTCTGGAAGCAGACAGCATTGGACTGTGAACATGCTGTCTGTGGACATGGCTGATCATCCCGAAAGAATTCCATTGGTTTGGTCAGGACTGTACAGTTCAGTGTTGTTCCTTTGTTGGAAGCGTTTTTGTGTTGGCAAGAGTAATAGCTTAGGTCAGCGTTTCACATGAGACATTCTCTGTCAGTTGTATTGAAGTCAATTCCATCCTTTttattgatgattattgttCCATCTCTTGCATtcaaagggtaactaccgttcttttcaacctggaccctattctcctatgtttttgtgtctaagtgactgataggaacaacaatctttgacatcggtccagtattaagagagatcgctgcagtcggcagtggagaaacaagctacaatctaagttaataggacaattgtccagcttgttttTACCATCAGAAATgggcttgttttgccgctgacagacttagattattattctaagtgtctgacaacattatagaaaggatccctacagagagagacctttaaacctctttgagacctttctgtttaaccagaaacagctctgaggtcgctagcgctaaaccctccagactgcatgtaaaaaaaaaaaaacccgtacttttagcgtgtatagagccaacatattttcacatgtaaatctgtaaactatgtgtttatttcaaccaaaactagagttgtgatggttggaaaagtggaaagacgacccaaaacagattttaatagttttattctgttgactttgaatgaagtgtattttacgatgctaaaatgactgtttatttacatggagtctggtgggtttagcgaacgcaatttcgcggatgttttcgtgtttaaaaaaaggatcttaatctttaacagaaaggtcgacctccttagaaatcctttccataatgttgtcagacacttagaatattaatctgagtctgtcaacAAGCTGCACaactgccctattaacttacattgtagtttGTTTCACTGCTACCGAttgcagcgatctctcttaatactggaccgatgtcaaagattagacacagaaacataggaaaatagggtccaagtTGGAAAATACGGAAGTTACCCTCTAAGCTACTAAAAAAAGCTGATAAATATGATCGTCAAGAGCACATGCAACAGTAAGAAGCGTATGGCCATGTCCTTTCAAGATTCATGGATTAATAACAAATGTTGGAGTGAGTGTTAGCTTACCGTAACTCTTAATGGAATGGCTGATAAATGATGTGAAGAAACAGACATCTTGCATATTTTCACAATGAAGTCGATGTGAGGAATGTGTACAGTGTTAAAAGCTCTTTCTGCCTGCTGTCCAAAAACACTGCAGTAAAACCACAACACAGTACTCCGATTTTGGTAATAACTTATAAATATTTCATATGGTATCACCTTTGCCAATAAATATGTGCGTGTATCTAATGCTCG
>TU312732
GAAAAAGTGTCATGCGCGATACCGCTTGTGATGGTAGTATGGCGTGTGTGAAGGTTAACGTTAGTTAAAACGTTAGTACACTTAACTATACTTGTAATTTAACTCGGTTTTCAGTGTGTTTTGCTCACGTGTATAGGGTGTCCCGCTGAACGACGGTGTGTACTTCCTCACAGGCTAACTGTCGCAGGCATGGCGGGTCTGTCCAGCTACGCCGTGCGCATGGCCAGACTGAGCGCGCAGATCTTCGGGGGGGTCGTGCGTCCGACAGACTCCAGGTCCATGAAGGTGGTCCAGCTGTTCCAGGAGCCCCCCATGGCCCAGAGGAAGGAGGTGTACGACTGGTACCCACAGCACAAGATTTACTACTCCATGACCCAGAAGCTCCGCTTCATGGGACTGTTCAGAGACGAGCATGAAGACTTCAAGGAGGAGATGCGTCGCCTGAGGAAACTGCGAGGAAAAGGGAAACCAAAGAAAGGAGAAGGGAAGAGAGCGGGGAAGAAGAAATGAGCTGTTTTTCTCCCCCTTCTTTTTCTGGAAGCAGACAGCATTGGACTGTGAACATGCTGTCTGTGGACATGGCTGATCATCCCGAAAGAATTCCATTGGTTTGGTCAGGACTGTACAGTTCAGTGTTGTTCCTTTGTTGGAAGCGTTTTTGTGTTGGCAAGAGTAATAGCTTAGGTCAGCGTTTCACATGAGACATTCTCTGTCAGTTGTATTGAAGTCAATTCCATCCTTTttattgatgattattgttCCATCTCTTGCATtcaaagggtaactaccgttcttttcaacctggaccctattctcctatgtttttgtgtctaagtgactgataggaacaacaatctttgacatcggtccagtattaagagagatcgctgcagtcggcagtggagaaacaagctacaatctaagttaataggacaattgtccagcttgttttTACCATCAGAAATgggcttgttttgccgctgacagacttagattattattctaagtgtctgacaacattatagaaaggatccctacagagagagacctttaaacctctttgagacctttctgtttaaccagaaacagctctgaggtcgctagcgctaaaccctccagactgcatgtaaaaaaaaaaaaacccgtacttttagcgtgtatagagccaacatattttcacatgtaaatctgtaaactatgtgtttatttcaaccaaaactagagttgtgatggttggaaaagtggaaagacgacccaaaacagattttaatagttttattctgttgactttgaatgaagtgtattttacgatgctaaaatgactgtttatttacatggagtctggtgggtttagcgaacgcaatttcgcggatgttttcgtgtttaaaaaaaggatcttaatctttaacagaaaggtcgacctccttagaaatcctttccataatgttgtcagacacttagaatattaatctgagtctgtcaacAAGCTGCACaactgccctattaacttacattgtagtttGTTTCACTGCTACCGAttgcagcgatctctcttaatactggaccgatgtcaaagattagacacagaaacataggaaaatagggtccaagtTGGAAAATACGGAAGTTACCCTCTAAGCTACTAAAAAAAGCTGATAAATATGATCGTCAAGAGCACATGCAACAGTAAGAAGCGTATGGCCATGTCCTTTCAAGATTCATGGATTAATAACAAATGTTGGAGTGAGTGTTAGCTTACCGTAACTCTTAATGGAATGGCTGATAAATGATGTGAAGAAACAGACATCTTGCATATTTTCACAATGAAGTCGATGTGAGGAATGTGTACAGTGTTAAAAGCTCTTTCTGCCTGCTGTCCAAAAACACTGCAGTAAAACCACAACACAGTACTCCGATTTTGGTAATAACTTATAAATATTTCATATGGTATCACCTTTGCCAATAAATATGTGCGTGTATCTAATGCTCG
>XM_039792384.1
ggtggaaggagagagaaaagaagtggAAAGATAGAGAAAAGGGCAACAGAAacgtgacagagacagaatacaaggccaaggcgaccagggacaggaggaggtgggagaagaccacagcggtgaagatatggagggagagcatcaccaagatgaggaaggagaaagcgagagacaagAGAAGGTGCAGGGCTCAGACAGTGAAAGGGAAAGCAGAGTGCCTGGGCCATCACCAACCATCTCCAGTCAAGCTGGTCCACACGGAAGGCATGGCGGGTCTGTCCAGCTACGCCGTGCGCATGGCCAGACTGAGCGCGCAGATCTTCGGGGGGGTCGTGCGTCCGACAGACTCCAGGTCCATGAAGGTGGTCCAGCTGTTCCAGGAGCCCCCCATGGCCCAGAGGAAGGAGGTGTACGACTGGTACCCACAGCACAAGATTTACTACTCCATGACCCAGAAGCTCCGCTTCATGGGACTGTTCAGAGACGAGCATGAAGACTTCAAGGAGGAGATGCGTCGCCTGAGGAAACTGCGAGGAAAAGGGAAACCAAAGAAAGGAGAAGGGAAGAGAGCGGGGAAGAAGAAATGAGCTGTTTTTCTCCCCCTTCTTTTTCTGGAAGCAGACAGCATTGGACTGTGAACATGCTGTCTGTGGACATGGCTGATCATCCCGAAAGAATTCCATTGGTTTGGTCAGGACTGTACAGTTCAGTGTTGTTCCTTTGTTGGAAGCGTTTTTGTGTTGGCAAGAGTAATAGCTTAGGTCAGCGTTTCACATGAGACATTCTCTGTCAGTTGTATTGAAGTCAATTCCATC
>XM_039792385.1
aggagagagaaaagaagtggAAAGATAGAGAAAAGGGCAACAGAAacgtgacagagacagaatacaaggccaaggcgaccagggacaggaggaggtgggagaagaccacagcggtgaagatatggagggagagcatcaccaagatgaggaaggagaaagcgagagacaagAGAAGGTGCAGGGCTCAGACAGTGAAAGGGAAAGCAGAGTGCCTGGGCCATCACCAACCATCTCCAGTCAAGCTGGTCCACACGGCATGGCGGGTCTGTCCAGCTACGCCGTGCGCATGGCCAGACTGAGCGCGCAGATCTTCGGGGGGGTCGTGCGTCCGACAGACTCCAGGTCCATGAAGGTGGTCCAGCTGTTCCAGGAGCCCCCCATGGCCCAGAGGAAGGAGGTGTACGACTGGTACCCACAGCACAAGATTTACTACTCCATGACCCAGAAGCTCCGCTTCATGGGACTGTTCAGAGACGAGCATGAAGACTTCAAGGAGGAGATGCGTCGCCTGAGGAAACTGCGAGGAAAAGGGAAACCAAAGAAAGGAGAAGGGAAGAGAGCGGGGAAGAAGAAATGAGCTGTTTTTCTCCCCCTTCTTTTTCTGGAAGCAGACAGCATTGGACTGTGAACATGCTGTCTGTGGACATGGCTGATCATCCCGAAAGAATTCCATTGGTTTGGTCAGGACTGTACAGTTCAGTGTTGTTCCTTTGTTGGAAGCGTTTTTGTGTTGGCAAGAGTAATAGCTTAGGTCAGCGTTTCACATGAGACATTCTCTGTCAGTTGTATTGAAGTCAATTCCATC
>XM_039792386.1
AACTAACCAATCAGCTCCACGGAAAAAGTGTCATGCGCGATACCGCTTGTGATGGTAGTATGGCGTGTGTGAAGGTTAACGTTAGTTAAAACGTTAGTACACTTAACTATACTTGTAATTTAACTCGGTTTTCAGTGTGTTTTGCTCACGTGTATAGGGTGTCCCGCTGAACGACGGTGTGTACTTCCTCACAGGCTAACTGTCGCAGGAAGGCATGGCGGGTCTGTCCAGCTACGCCGTGCGCATGGCCAGACTGAGCGCGCAGATCTTCGGGGGGGTCGTGCGTCCGACAGACTCCAGGTCCATGAAGGTGGTCCAGCTGTTCCAGGAGCCCCCCATGGCCCAGAGGAAGGAGGTGTACGACTGGTACCCACAGCACAAGATTTACTACTCCATGACCCAGAAGCTCCGCTTCATGGGACTGTTCAGAGACGAGCATGAAGACTTCAAGGAGGAGATGCGTCGCCTGAGGAAACTGCGAGGAAAAGGGAAACCAAAGAAAGGAGAAGGGAAGAGAGCGGGGAAGAAGAAATGAGCTGTTTTTCTCCCCCTTCTTTTTCTGGAAGCAGACAGCATTGGACTGTGAACATGCTGTCTGTGGACATGGCTGATCATCCCGAAAGAATTCCATTGGTTTGGTCAGGACTGTACAGTTCAGTGTTGTTCCTTTGTTGGAAGCGTTTTTGTGTTGGCAAGAGTAATAGCTTAGGTCAGCGTTTCACATGAGACATTCTCTGTCAGTTGTATTGAAGTCAATTCCATC
>XM_039792387.1
TAACTAACCAATCAGCTCCACGGAAAAAGTGTCATGCGCGATACCGCTTGTGATGGTAGTATGGCGTGTGTGAAGGTTAACGTTAGTTAAAACGTTAGTACACTTAACTATACTTGTAATTTAACTCGGTTTTCAGTGTGTTTTGCTCACGTGTATAGGGTGTCCCGCTGAACGACGGTGTGTACTTCCTCACAGGCTAACTGTCGCAGGCATGGCGGGTCTGTCCAGCTACGCCGTGCGCATGGCCAGACTGAGCGCGCAGATCTTCGGGGGGGTCGTGCGTCCGACAGACTCCAGGTCCATGAAGGTGGTCCAGCTGTTCCAGGAGCCCCCCATGGCCCAGAGGAAGGAGGTGTACGACTGGTACCCACAGCACAAGATTTACTACTCCATGACCCAGAAGCTCCGCTTCATGGGACTGTTCAGAGACGAGCATGAAGACTTCAAGGAGGAGATGCGTCGCCTGAGGAAACTGCGAGGAAAAGGGAAACCAAAGAAAGGAGAAGGGAAGAGAGCGGGGAAGAAGAAATGAGCTGTTTTTCTCCCCCTTCTTTTTCTGGAAGCAGACAGCATTGGACTGTGAACATGCTGTCTGTGGACATGGCTGATCATCCCGAAAGAATTCCATTGGTTTGGTCAGGACTGTACAGTTCAGTGTTGTTCCTTTGTTGGAAGCGTTTTTGTGTTGGCAAGAGTAATAGCTTAGGTCAGCGTTTCACATGAGACATTCTCTGTCAGTTGTATTGAAGTCAATTCCATC

Function

symbol description
mrps33 Predicted to be located in ribosome. Predicted to be active in mitochondrion. Is expressed in otic vesicle and sensory system. Orthologous to human MRPS33 (mitochondrial ribosomal protein S33).

NR:

description
28S ribosomal protein S33, mitochondrial

GO:

id name namespace
GO:0005840 ribosome cellular_component

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU312731 True 1994 TUCP 0.42 3 26372736 26381109
TU312732 False 1990 TUCP 0.42 3 26372736 26381109
XM_039792384.1 False 815 mRNA 0.52 3 26374205 26379857
XM_039792385.1 False 805 mRNA 0.52 3 26374211 26379857
XM_039792386.1 False 763 mRNA 0.50 3 26372715 26379857
XM_039792387.1 False 760 mRNA 0.50 3 26372714 26379857

Neighbor

gene id symbol gene type direction distance location
cnot4b NA coding upstream 118779 26222789 ~ 26253935 (+)
LOC120553199 LOC104965315 coding upstream 153357 26216141 ~ 26219357 (+)
il17ra1a NA coding upstream 213801 26145907 ~ 26158913 (+)
dera dera coding upstream 593099 25768737 ~ 25779615 (+)
hmga2 hmga2 coding upstream 618899 25695881 ~ 25753815 (+)
braf braf coding downstream 5706 26386815 ~ 26427044 (+)
aebp2 LOC103362558,LOC104950851 coding downstream 638253 27019362 ~ 27044417 (+)
ndufa5 ndufa5 coding downstream 664957 27046066 ~ 27051282 (+)
gpr22a gpr22,LOC103362561,LOC104950263 coding downstream 756937 27138046 ~ 27146791 (+)
LOC120553521 NA coding downstream 843153 27224262 ~ 27231391 (+)
G230563 NA non-coding upstream 113583 26258925 ~ 26259131 (+)
G230555 NA non-coding upstream 171487 26200247 ~ 26201227 (+)
G230525 NA non-coding upstream 192698 26179543 ~ 26180016 (+)
G230521 NA non-coding upstream 197973 26173646 ~ 26174741 (+)
G230520 NA non-coding upstream 199120 26171388 ~ 26173594 (+)
G230597 NA non-coding downstream 1582 26382691 ~ 26383656 (+)
G230604 NA non-coding downstream 10529 26391638 ~ 26392178 (+)
G230600 NA non-coding downstream 47325 26428434 ~ 26432122 (+)
G230635 NA non-coding downstream 232843 26613952 ~ 26614172 (+)
G230645 NA non-coding downstream 299755 26680864 ~ 26681098 (+)
arhgef39 arhgef39 other upstream 265891 26038188 ~ 26106823 (+)
LOC120553706 NA other upstream 559886 25810407 ~ 25812828 (+)
msrb3 msrb3 other upstream 709895 25641840 ~ 25662819 (+)
LOC120553523 NA other upstream 998718 25362882 ~ 25373996 (+)
G230148 LOC102781993,LOC101465723 other upstream 1594456 24620812 ~ 24778258 (+)
LOC120553759 NA other downstream 312247 26693356 ~ 26971853 (+)
LOC120553194 NA other downstream 687968 27069077 ~ 27072552 (+)
G230842 NA other downstream 1221896 27603005 ~ 27603702 (+)
G230904 NA other downstream 1560212 27941321 ~ 27947473 (+)
G230975 NA other downstream 1676622 28057731 ~ 28058218 (+)

Expression


Co-expression Network