G230594 (mrps33)


Basic Information

Item Value
gene id G230594
gene name mrps33
gene type unknown
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053134.1
NCBI id CM020931.1
chromosome length 29109922
location 26375692 ~ 26381365 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>TU312734
atgggacctttaagacctagaacaatACTTCACAGATTTCAGACTTTTAAAGGCCTAATATTGTGATTTTGAAATCTTTTTTAGACCCTGTGTAACTGTCAGCAGTGACCCGGTGCAGGTCAGAATAGTCCTAAAACCTTGAGCTTGAGAGCTACAGAGTTCCACAGCTGATATGAAAGACACTGTAGATAAACTGTTGCCAACATGCTTTACCAGTCATCCTTTTATGGCTAAAACAAAACCCCTGATATCTGGCCGAGCATTAGATACACGCACATATTTATTGGCAAAGGTGATACCATATGAAATATTTATAAGTTATTACCAAAATCGGAGTACTGTGTTGTGGTTTTACTGCAGTGTTTTTGGACAGCAGGCAGAAAGAGCTTTTAACACTGTACACATTCCTCACATCGACTTCATTGTGAAAATATGCAAGATGTCTGTTTCTTCACATCATTTATCAGCCATTCCATTAAGAGTTACGGTAAGCTAACACTCACTCCAACATTTGTTATTAATCCATGAATCTTGAAAGGACATGGCCATACGCTTCTTACTGTTGCATGTGCTCTTGACGATCATATTTATCAGCTTTTTTTAGTAGCTTAGAGGGTAACTTCCGTATTTTCCAacttggaccctattttcctatgtttctgtgtctaatctttgacatcggtccagtattaagagagatcgctgcaaTCGGTAGCAGTGAAACaaactacaatgtaagttaatagggcagttGTGCAGCTTgttgacagactcagattaatattctaagtgtctgacaacattatggaaaggatttctaaggaggtcgacctttctgttaaagattaagatcctttttttaaacacgaaaacatccgcgaaattgcgttcgctaaacccaccagactccatgtaaataaacagtcattttagcatcgtaaaatacacttcattcaaagtcaacagaataaaactattaaaatctgttttgggtcgtctttccacttttccaaccatcacaactctagttttggttgaaataaacacatagtttacagatttacatgtgaaaatatgttggctctatacacgctaaaagtacgggtttttttttttttacatgcagtctggagggtttagcgctagcgacctcagagctgtttctggttaaacagaaaggtctcaaagaggtttaaaggtctctctctgtagggatcctttctataatgttgtcagacacttagaataataatctaagtctgtcagcggcaaaacaagcccATTTCTGATGGTAaaaacaagctggacaattgtcctattaacttagattgtagcttgtttctccactgccgactgcagcgatctctcttaatactggaccgatgtcaaagattgttgttcctatcagtcacttagacacaaaaacataggagaatagggtccaggttgaaaagaacggtagttaccctttgaATGCAAGAGATGGaacaataatcatcaataaAAAGGATGGAATTGACTTCAATACAACTGACAGAGAATGTCTCATGTGAAACGCTGACCTAAGCTATTACTCTTGCCAACACAAAAACGCTTCCAACAAAGGAACAACACTGAACTGTACAGTCCTGACCAAACCAATGGAATTCTTTCGGGATGATCAGCCATGTCCACAGACAGCATGTTCACAGTCCAATGCTGTCTGCTTCCAGAAAAAGAAGGGGGAGAAAAACAGCTCATTTCTTCTTCCCCGCTCTCTTCCCTTCTCCTTTCTTTGGTTTCCCTTTTCCTCGCAGTTTCCTCAGGCGACGCATCTCCTCCTTGAAGTCTTCATGCTCGTCTCTGAACAGTCCCATGAAGCGGAGCTTCTGGGTCATGGAGTAGTAAATCTTGTGCTGTGGGTACCAGTCGTACACCTCCTTCCTCTGGGCCATGGGGGGCTCCTGGAACAGCTGGACCACCTTCATGGACCTGGAGTCTGTCGGACGCACGACCCCCCCGAAGATCTGCGCGCTCAGTCTGGCCATGCGCACGGCGTAGCTGGACAGACCCGCCATG

Function

symbol description
mrps33 Predicted to be located in ribosome. Predicted to be active in mitochondrion. Is expressed in otic vesicle and sensory system. Orthologous to human MRPS33 (mitochondrial ribosomal protein S33).

NR:

description
PREDICTED: 28S ribosomal protein S33, mitochondrial

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU312734 True 2058 TUCP 0.42 2 26375692 26381365

Neighbor

gene id symbol gene type direction distance location
tmem178b tmem178b,LOC107725619 coding downstream 11023 26261625 ~ 26364669 (-)
tmem121b cecr6,LOC102790305 coding downstream 204439 26169109 ~ 26171253 (-)
LOC120553108 LOC106676404,LOC106675180,LOC106675933,LOC106633052 coding downstream 235658 26128814 ~ 26140034 (-)
rergla rergl,LOC104934027 coding downstream 255374 26113800 ~ 26120318 (-)
lmo3 lmo3,LOC107550907,LOC107757261 coding downstream 473691 25856640 ~ 25902001 (-)
cog5 cog5,LOC102792593 coding upstream 669906 27051271 ~ 27165117 (-)
LOC120553064 NA coding upstream 786065 27167430 ~ 27175049 (-)
tmtc1 tmtc1 coding upstream 907487 27288852 ~ 27476902 (-)
caprin2 caprin2 coding upstream 1179559 27560924 ~ 27599908 (-)
recql recql coding upstream 1232011 27613376 ~ 27634574 (-)
G230582 NA non-coding downstream 116903 26256009 ~ 26258789 (-)
G230586 NA non-coding downstream 119862 26255144 ~ 26255830 (-)
G230557 NA non-coding downstream 166352 26209114 ~ 26209340 (-)
G230552 NA non-coding downstream 200519 26174798 ~ 26175173 (-)
G230550 NA non-coding downstream 207311 26167341 ~ 26168381 (-)
G230596 NA non-coding upstream 807 26382172 ~ 26382375 (-)
G230634 NA non-coding upstream 216842 26598207 ~ 26598407 (-)
G230714 NA non-coding upstream 560947 26942312 ~ 26944959 (-)
G230717 NA non-coding upstream 582425 26963790 ~ 26971864 (-)
LOC120553792 NA non-coding upstream 604703 26986068 ~ 26986741 (-)
mkrn1 mkrn1 other downstream 179182 26171320 ~ 26196510 (-)
LOC120553115 NA other downstream 774312 25595578 ~ 25601380 (-)
sult4a1 sult4a1,LOC102784496 other downstream 1157999 25191261 ~ 25217693 (-)
G229950 gdi2,LOC100708443,LOC102215003 other downstream 2461000 23908556 ~ 23914692 (-)
LOC120553046 NA other downstream 2511718 23858219 ~ 23863974 (-)
G230730 NA other upstream 735841 27117206 ~ 27118597 (-)
ipo8 ipo8 other upstream 1120735 27502100 ~ 27550712 (-)
LOC120553767 LOC104927640,LOC103363517 other upstream 1959717 28341082 ~ 28430526 (-)
G231126 NA other upstream 2363238 28744603 ~ 28745246 (-)
G231136 NA other upstream 2410640 28792005 ~ 28792745 (-)

Expression


Co-expression Network