LOC120553759


Basic Information

Item Value
gene id LOC120553759
gene name NA
gene type misc
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053134.1
NCBI id CM020931.1
chromosome length 29109922
location 26693356 ~ 26971853 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>TU312799
gggggggggggggggggggggggggttgggggggggggtgggggggtgtgggggggaaaCACCACCACTGACAACAGCTTCCAGACTCCTGAGCCCGAGACGCCGAGCCCGGAGCCGAGGGAGGACGAACCAGACGCGACGCAACAGAGCGCCAGAGAGGAGAAGCTGGAGCTAACAGCAGATgacaagaaacacaacaacaacaacatgttgGCTTCGCAGACGTTCACCTTGGTGAGCAGAGACACGTGAGCACTGGCGGCCACGACATCCACACTGGCGGCCCATAAAGCCCAAATGTAGCCTGCCTGCACAGAGCATGCTCCACGGCTTCCTGCGTTTACAACAGGACTATTTTGATACTACTGTTACATGCCCACAAGGAGACTGAGAGGATGACAGCCCTGACAACACACAGACGGGCCGCCATCACTTCCCGACAGTGAGAGAGGCAGATGTACTGTATCTTAACACCTGTTAAATCTGTCCAGACTGATATGTCCCTGGGCAAAACACCAACATATGGAGTCAGATTTGTCTCAAAACATTTCTGCATAAAAATAAGATTGTGAAATGGTcataaaaaaagttacaaatgaTGTTTGAGCTGAAATATACTTGCGCAATCCCCAGAAGGACTTTTGAGAGTTTTTTCTGGTTTCCATAGGAGTCTCCAGCTCAGTCGCGGCCAGGGGAAAGTAACTGGCCAGGCATTTGGTTTTTATAGGCGGGCCCTGACAatctaattcttttttttcagactATTCAATTCAACAACGGATTCATATCGAATAGTTCAATATTATGTAGGTTTATATGTTAActgatatgtactgtatattttaatgaTACTTCAAATTCGGTTCAGTCGATATAAATGAATTGTGAGCCGATAGTGCAGCCTATTATTTATCTGAATGGCAAAGTTGTGTAGTCTCCCACTATTAGACCTTACAATTCAGACACAAGCAGTCCAAGGCCTAGTCAGTTATTAGTGCAAAACAAAGTCACGAAAAACAGCGACATCGTGACAGCTGCATGATCAACGCCATGGACAGCAAGACTTTGACTATAGGGGGCATGTTATTCTACTCTCTCATATCTATTACTTCACattgacaaacacacactgaaaaaaGCCCAACATTTGTAACCACCTAAAAGCTGTAAGACAATTCAGGACAAAGAACTTAGACAAAAAGGATAGGAATAATAAGATGACTAACTTACTACACTTTGGTGGCTCAGGCTGGGCCTTATATAGCTGCAGCCACCATTTTCCCGATAAATCGAATCTCCGCAGTGAAGTGTCTTTCCACTCTGTGTTGCATTTCTTGGTCAGATCGTGGAAGCACTCAAGAGCCATAATGTGGACATTACTGAGCAGTGTTTTCAGTGTCCATCATCTGGAGGTGTGGAGCTGTGTGTCGGGTGCGTGGGTCCAGTCAGTGTATGCAGGGGGTTCTACTTTTACTGAGTCCAGGAAGGAGCTGCTCTCCGGGTCGAGTGAAGCAATGGATTCTATGAATGCACCGTTTCGGTCCGTGTACTTTGGCAGCCAACaggtttttgttttgaaattaaaaaacaaaatcggGAACAAAATGTAGGAGAACAAAAAACGGAGAACAATTAGGCTGCAACGGTGGGCTTTTGTGTGAACTTGTGCAGGACATTATAGATACTGAATAAATCCTCAATAGCCTTCTCACCGGACATGGCGTGAACACCGATCAAGTGGAGTTGGTGGTTAAAGCAGTGAACATTTGGGATTTCTCTGCCCAGCTCACGTTGAAGGAGTCTTTGAACCCTAGCCAGTCTCCCTGAAATTGCAAAGGCCCCATCGTAAACTTGGCTAAGGATTTTGTCTGTGCTCAGGCCAGCAAAATTCCGAAATAAGTATCTGTGTGAGACGTTTTGCATCTGCATTTTGACCTGCATCTGCTGTGGCGATGGTCAAGAACCTCTCTCTTATAGTTTAGCTTTCGTCAACAAAACGCAGTACAATAGGAATATTTCCACAGCCCGTTGGGTCTTGGGTTCCTTCCATTTTGTGTAAAAAGAGTCTCCTCTTTAATATGCTCTGTCACCAGTTGGCTCATCAgttctattatttcatttagaATGTCATGGTTTATGTAGGTTGCATTCTTGGGAATGGTAGGGGCAGTTTTTGCCAGCTCTGGGTCTTGCATATTTCTCCTGGGAGTGCCAAATTCCTGGATGGGTGAGCCTGGCCCCCTGGGGCCCATAATGTTGGGTCTGCTCCAGCTGTCCATTGACAGGCAACCATACAAAGTCCAAAATTTGAAAAGGAATAGGTAGACCAAGAAAGAGGTGACTAACTCAAGTGTCACCTGATTTCGGAATCATATTGACCTATATGATAGTCATCCCTACAGTCGTGAAAATAGGTAATAGTGTAAGAAGAGTGTTTGTTGTACAGAGTTGGTGCTATGTCTGTTTCAGCCACCTTTAtgtatgtgctgtgtgttttcagaaaGGCCaaccttttttcaaaaaaaggatTGTTTTTAGGGTTTTTATTATCGGTTTATCCAGTCGAGGGTAGGTTTCCTGAACACAGATGCTGTTTGGCAGCTCCACATTCACAATAGCACAACTGAACCCCCGCTTGTTGCCCAGTACTTCCACGATCTGATCTGTTGGCGACACCAGCACCAGCAGTTAGAATGGACCATGTCGACACAGGCTGTGTATTAaaagcagcagagcagcagcttcagTCCTCCTTCCGTCATCCACGTTTTAGCAACACACAATTAAGCGTGATTGATGGTTCTgcagaggctccacgcagaactttcgtgagagagtgatggtgattatcttcagagtgagtgctgactctagagtcctagtgagagaaccaaagagtctcccctgttctttctgaccacggttggaaatctggagcagaagaagttaaccctctccttgatgtcatgttgtttatggagaaggagaaccaggaaatgagtcggggatgcaacgctaccaagccacgacTGAGAGACGCGCGTCGCCAcaacgtgtagttaaatttttcgagaggtgcatgtcaggctacggcgtagggtcgaTATCGCCACGTACCTGCTGTACGTAGTAAATCACGCTTCACTGTAGTTGGGTGCGTAAATCTGAAGAAAACCGCCATTAAGTAACGATATGCTTCAGCGTGGCCTCACCTGTGTAGGGCAAGTAAAACACGAGCTGTTATTCAgctgcgcgatcacggaaggcttgtatcacgtggacgcaccgacagtgttgttgtcattacttagaattcctcacgggggagacagaaactacgcactgtgTAGCTTTAAGCATgttgttaaaatgtttgttttgttgccaTTTATCCAGTCAGGCTGAGACACAAAAAGGGTGAACACTCAATCCTGTTCTGTcgttctgtttgttttctgtgtctttcttttgtttattgCTGTTGTCATTGGCCATATCATTTAATtgctataaatatataaaatgaaaCCATTTCACAATCTTGACCGGATGTACGACTTGTTTGGGGGCAATATAGCTCCATAAATATGTGTTgccaaatgtacacacacacacacacacacacacacacacacacatcaatacaCAGAGCTTTTGATACCTTACTAAGTATTAAAGTCATCTTAACATAATAATTCTTAGAATATTCTACTGATCTGGAGGAGGGGATATTAGCTGTGACTGAGTTGCTGGATGGGAGTGTACAGCTGCATACAGGAGCACTTGAGAAGTCTCAGCGCAGATGGGCTAAGCACCAAAACTCGACACACATGCAGTGCTTTATTTAACCCCAAAGTGACCGCCGATGCTCTTGGATTTTAACCGCTcccattttttgtgtttttatttgacaCCAGAGGCTCCGTTATCACTCTATTTTCATTTTTGCACCTGCAACATAACAGATTGTCCTTCATTGGATAgacttataaatatatatgtaaaaaaaagtatatatatgaaCATAAAGCAGATTTTTACTTCAACAAGGTGCCACTTCATGCTGCTGATTGTTTTGGACAGAACGAAGTATAATATTTTCAGGGTTGTGATTATTTATGTCGAGCAGACAGTCTGAATCTCCTGAAGTCTGTTGGCGCCACACGCAGTACGTGAATGTTTTTGGATTTCTAGTCTGCTTTTtcagtttgtgtctttttttgtttgttttcggTTTACATTACTCAGAAGTTCTACCAGAGGCTGAGGACACGACACAGATTAGACTTTTTGCGTTTGAATCTGTGCTAGGTGGCGAAGAATTGGACAATAGCACATGTATGAAGCAATAAGTTGGACTTTGGAGCTCCAGGAcataaaagacatttaaaagagatgtacaaactgtaaaaaaaaatataaaagtaaaaagaaataaaacaagatAGCATAATTTATGTACACACTGAAAAGAAGAAGAGCGAATATTCTAACTATAAGaggttattattaatattattaggGTCAATATGCAAAAGGTTCAAA
>XM_039792455.1
CGCGCCGCGCACTCCAGCCCCTGTGTGTAGGAACCAGAGCAGTGGAGCTCTGAGCTAGACATGGCGGCCGATCCTAAGCCGGACTGGCTCTCCTGCCTTCCCTCTGCCTGGAGTTACGGGGTGACTCGGGATGGACGCATATTCTTTATCAACGAAGAAGCGAAGAGCACAACCTGGCTGCATCCCGTTACCGGAGAAGCCGTAATCACGGGGCACAGAAAAACTCCAGATTTACCAACAGGATGGGAGGAAGGATACACATTCGAGGGAGCTCGCTGCTTCATCAATCACAATGAGCGAAAGGTGACCTGTAAGCACCCGGTGTCAGGCGTCCCCTCCCAAGACAACTGCATCTTTGTCGTGAACGAACACATGAATTGTGGAATGCTTGTCCACCCTGACAAGCCAGTAGAGGCTCTGAGCAGGCCGGCTCCCAAGGCTTCGTCAGAGCAAGGCAGCACCAGTGACAAGAAGGAGCGTCCCATGAGCACCATGAGCGAAGCGTCAAACTACACGGGCGGCTCCGACTACAGCACCTTCCCCGGCAGCCCGGCCACCACcgccaacaccaccaccaccacctccactTCATCCACACGGCCCTCTAGGTCTTCCAAAAAAGTTCACAACTTCGGGAAGAGGTCAAACTCCATCAAGAGGAACCCCAATGCCCCGGTTGTCAAGAGCAACTGGCTTTACAAACAGGACAGCACAGGCATGAAGCTGTGGAAGAAGAGGTGGTTTGTTCTGTGCGACCTGTGCCTCTTCTACTACCGTgACGATAAAGAGGATAGCATCCTGGGAAGTATCCTGCTGCCAAGCTTTCACATCTCCATGTTGTCTGTGGATGACCACATCAGCAGGAAATATGCCTTCAAGGCCACTCACCCCAACATGCGGACGTATTATTTCTGCACTGACACATCCAAAGAGATGGAGTCCTGGATGAAAGTCATGACGGATGCTGCCCTCGTCCACTCTGAACCAGTGAGAAGACTGGACAAGTTGAAAGTGGATCAGCGGACCCCTCAGGAGTTGAACAACTTCCTGAACCACAGAGTCCTAACCCGGCCCGAGATCCAGAACAACGAACGCAACCGCGAGCCCGTGCGACAACACTCCCTGTCTCGAGTCGACGACAAACGGCAGAAAGACCTGGAGAAACACAACTGCCAGCGGGAGTACTACACCTTACAGAGAGACGGGGAGAAGTACTCGCTGAAGAAAGACGGCGTGAGCTACATGCTTCAGAAGGACGGAGAGAGGTACATGCTGCGAAAAGACGGGGACAAGTCTTCGCTGCAGAAAGACGGAGAGGTGTGCGCACTCCACAGGGATCTGGAGAAGCATGCTGTCCAGAACAAGGACGAAACGTGCATTGTGACGCCGACGGAGGAGAAATACGCTCCGTCTAAAGATGGAGAGAAGTACCTGCTCGCgagggatggagagaaataCGCACTGCAAAAAATAGGAGACAGGCACACACTCCAGAAAGATGGACCGAAATACGTTCCCCAGAAGCAGGTGAAGAGACAGCTGTCATTAAAGGAGACGGAGAGGTACGGTGTCATGAGGGAGATGGAGAATAAATATGGTACCATACAGGTTGTGGACAAATACGGCACTCTGAAGGAAGTGAGGAAATACAGCACGCTCCGGGAAGGGGAGAAATACGCTACTCTCAGAGACGCAGGGAAGTATGCTACGATCCGTGGCGGGGATAGATATGGCTTCCAGAGAGACCCGAGTGCAGAGAGGTCTCTGACTAAAATCAGCAGCATCAAGCTGCAGCCGGCTCAGGCCGCCGCTATCGCAGCCGCGGTGTCTGCATCTCGCCAGGGCCAGGCCAATCTCAATGTCCAGCATCCTGCGCAGGTCAACGGCTCGGGGTCCGCTGCGGCGCCCGCGGAGCAGACTGGGGACTGCAGCCCGGCAGAGGTGGACAGCAGCCTGGCCATGGGTCCAGGAAAGTCCCCTGCTCCGGTCCAGGAGCCGGAGAAGGGCCTGTCCCGGACCAATTCCATGCAGCAGCTGGAACACTGGGTCCGCACACACAGGACAAGAGGACTGGACGATGACACCAGGAGTGTTACGTCCTACCAGACCCTACCCAGGAACATGCCCAGCCACCGTGCTCAGATTGTGCCCCGCTACCCAGAGGGCTACCGCACGCTGCCCCGCAACAGCATGATGAGGCCCGACAGCATCTGCAGCGTGGCGGGCTCTGTGTATGACCGGGCCCTCCGTCCCGCCTCCACCAGCACCATCACCACAGCGGAGAAGAGGCGGTCGATGAGGGACGACACCATGTGGCAGCTGTATGAGTGGCAGCAGAGACAGGCCTTCTCCAGGCACAGTCTGGCTCAGCCAACAGCTGTGGGTCATTATGGCACCCTGCCCAGCACAAAGACCATGGGTAACATCTGTGAACACTCTGTGGCGCACTCCATCCCCACCTCACCGTCTCATGGCTCCCTGGCCCTCTACAGCACCTTCTCCCCCCCACGCCAGCAGGTCCCTCCAACAACAGCACCCCCCGCCTCTCTACCTTACGGCTACCCGCCTGACCGACGATCCATCGCAGCCGGCGTCCCTCCTCAGTCCATCACCCCACAGTCCCTGCAAGGCAAGACGCCCGAGGAGCTGACCCTGCTCCTGATCAAGCTCCGCCGGCAGCAGGCGGAGCTCAACAGCCTGCGGGAACACACAGTAGCTCAGCTAATGGCCCTGGGTTTGGAGGGGCCCAACGCCAAGACTGACGTTCTTTCTCATCACCTCCAAAGGAACCTTATTTACCTGGACAGCCAGATCAGTCCAGACGACTTCAAAGACGGCTCGTTCATCCCGCGCACAGAGGAGGCTGACATAGACaccaAGCTGAGCAGACTGTGTGAGCAGGACAAGGCGGTGAGGATGCAGGAGGAGAAACTGCAGCAGCTCCACAGAGAGAAGcacactctTGAGACAGCCCTGCTGTCTGCCAGTCAGGAGCTGAGTGAGCAGAGCGGCTCCAGCGCTGGCGCCCAGAGCCTGGTCCAGCAGAGGGACGTGCTGCAGAACGGCCTGCTCAGCACCTGCAGAGAGCTGTCCAGAGTCAGCACTGAGTTGGAGCGTTCCTGGAGGGAGTACGACAGGTTGGGGGCAGATGTTACTCTGGCCAAGTCCAACCTGCTGGAGCAGCTGGAGGCCCTGGGCAGTCCGCAgacAGAGCCTCCAAGCCAGCGGCACATCCAGATCCAGAAGGAGCTGTGGAGGATCCAGGACGTGATGGAGGCTCTGGCCAAAAACAAACCACAGCGGAGCACAGACAGCACAGGCTTACCCGGTTCCAAACCGCTCTCTAGTCTCCAGAAGAACGAGCAAGCTCCAGACTACCGGCTGTATAAGAGCGAGCCTGAGCTGACCACGGTGAAGGAGGAAGTAGACGAGGCCAACGGTGAGGACAAGGACAAGACCGACTCCTCTGCTGAGAGCAGGGACACTGCAGCTTCAAAAGTGCCCCCCTACCCGGTGGGCATCATTCCTCCCAGGACCAAATCCCCCATAAGTCCTTGCAGGAGTCCTCCCGAGTCCTCCACTATTGCCTCCTATGTCACCCTGAGGAAGACCAAGAAGCCTGAATCCAGATCAGACCGTCCCAGGAGTGCCGTGGATCAGACAGGGTTTGGGGAGCGGGAGGTGGGGAGAACCAGGATGAGTGTGGAGGAGCAGCtggagaggatgaggaggaacCAGCAGGCCTCGTCGCTtcgagagaagaagagagaaacgCCATCCCGCTCGCCCTCCTTCAGCAAAGACAGCCCTTCCTTTATCCAGCAGagtcgGCTCCAGGCGGAGGGGGCGTGTGCAGACCCTGTGGAGCTGGAAGCGGCTCTGCAGCAGCTGAAGGCGGCTCACATGGAGCGGAGCAGGACGGCTGCTGAGGCTCAGCCTGCCCCACAGGAGGTGTACAGGGTGGAGGAGGTGAAAGATGAGGTGCAGCGTGACGGGGACGGTCACGGGACCCTGCAGAGCGTGAAGGACAACAGCACAGACAGTGAGggaaaCACCACCACTGACAACAGCTTCCAGACTCCTGAGCCCGAGACGCCGAGCCCGGAGCCGAGGGAGGACGAACCAGACGCGACGCAACAGAGCGCCAGAGAGGAGAAGCTGGAGCTAACAGCAGATgacaagaaacacaacaacaacaacatgttgGCTTCGCAGACGTTCACCTTGGTGAGCAGAGACACGTGAGCACTGGCGGCCACGACATCCACACTGGCGGCCCATAAAGCCCAAATGTAGCCTGCCTGCACAGAGCATGCTCCACGGCTTCCTGCGTTTACAACAGGACTATTTTGATACTACTGTTACATGCCCACAAGGAGACTGAGAGGATGACAGCCCTGACAACACACAGACGGGCCGCCATCACTTCCCGACAGTGAGAGAGGCAGATGTACTGTATCTTAACACCTGTTAAATCTGTCCAGACTGATATGTCCCTGGGCAAAACACCAACATATGGAGTCAGATTTGTCTCAAAACATTTCTGCATAAAAATAAGATTGTGAAATGGTcataaaaaaagttacaaatgaTGTTTGAGCTGAAATATACTTGCGCAATCCCCAGAAGGACTTTTGAGAGTTTTTTCTGGTTTCCATAGGAGTCTCCAGCTCAGTCGCGGCCAGGGGAAAGTAACTGGCCAGGCATTTGGTTTTTATAGGCGGGCCCTGACAatctaattcttttttttcagactATTCAATTCAACAACGGATTCATATCGAATAGTTCAATATTATGTAGGTTTATATGTTAActgatatgtactgtatattttaatgaTACTTCAAATTCGGTTCAGTCGATATAAATGAATTGTGAGCCGATAGTGCAGCCTATTATTTATCTGAATGGCAAAGTTGTGTAGTCTCCCACTATTAGACCTTACAATTCAGACACAAGCAGTCCAAGGCCTAGTCAGTTATTAGTGCAAAACAAAGTCACGAAAAACAGCGACATCGTGACAGCTGCATGATCAACGCCATGGACAGCAAGACTTTGACTATAGGGGGCATGTTATTCTACTCTCTCATATCTATTACTTCACattgacaaacacacactgaaaaaaGCCCAACATTTGTAACCACCTAAAAGCTGTAAGACAATTCAGGACAAAGAACTTAGACAAAAAGGATAGGAATAATAAGATGACTAACTTACTACACTTTGGTGGCTCAGGCTGGGCCTTATATAGCTGCAGCCACCATTTTCCCGATAAATCGAATCTCCGCAGTGAAGTGTCTTTCCACTCTGTGTTGCATTTCTTGGTCAGATCGTGGAAGCACTCAAGAGCCATAATGTGGACATTACTGAGCAGTGTTTTCAGTGTCCATCATCTGGAGGTGTGGAGCTGTGTGTCGGGTGCGTGGGTCCAGTCAGTGTATGCAGGGGGTTCTACTTTTACTGAGTCCAGGAAGGAGCTGCTCTCCGGGTCGAGTGAAGCAATGGATTCTATGAATGCACCGTTTCGGTCCGTGTACTTTGGCAGCCAACaggtttttgttttgaaattaaaaaacaaaatcggGAACAAAATGTAGGAGAACAAAAAACG

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU312799 False 4545 lncRNA 0.44 3 26963162 26971853
XM_039792455.1 True 5617 mRNA 0.54 31 26693356 26968932

Neighbor

gene id symbol gene type direction distance location
braf braf coding upstream 266312 26386815 ~ 26427044 (+)
cnot4b NA coding upstream 439421 26222789 ~ 26253935 (+)
LOC120553199 LOC104965315 coding upstream 473999 26216141 ~ 26219357 (+)
il17ra1a NA coding upstream 534443 26145907 ~ 26158913 (+)
dera dera coding upstream 913741 25768737 ~ 25779615 (+)
aebp2 LOC103362558,LOC104950851 coding downstream 47509 27019362 ~ 27044417 (+)
ndufa5 ndufa5 coding downstream 74213 27046066 ~ 27051282 (+)
gpr22a gpr22,LOC103362561,LOC104950263 coding downstream 166193 27138046 ~ 27146791 (+)
LOC120553521 NA coding downstream 252409 27224262 ~ 27231391 (+)
LOC120553763 NA coding downstream 281563 27253416 ~ 27272215 (+)
G230645 NA non-coding upstream 12258 26680864 ~ 26681098 (+)
G230635 NA non-coding upstream 79184 26613952 ~ 26614172 (+)
G230600 NA non-coding upstream 261234 26428434 ~ 26432122 (+)
G230604 NA non-coding upstream 301178 26391638 ~ 26392178 (+)
G230597 NA non-coding upstream 309700 26382691 ~ 26383656 (+)
G230685 NA non-coding downstream 144073 27115926 ~ 27116894 (+)
G230746 NA non-coding downstream 260541 27232394 ~ 27233038 (+)
G230773 NA non-coding downstream 310646 27282499 ~ 27282919 (+)
G230774 NA non-coding downstream 311100 27282953 ~ 27283275 (+)
G230783 NA non-coding downstream 499235 27471088 ~ 27472678 (+)
mrps33 mrps33,LOC106591474 other upstream 312247 26372714 ~ 26381109 (+)
arhgef39 arhgef39 other upstream 586533 26038188 ~ 26106823 (+)
LOC120553706 NA other upstream 880528 25810407 ~ 25812828 (+)
msrb3 msrb3 other upstream 1030537 25641840 ~ 25662819 (+)
LOC120553523 NA other upstream 1319360 25362882 ~ 25373996 (+)
LOC120553194 NA other downstream 97224 27069077 ~ 27072552 (+)
G230842 NA other downstream 631152 27603005 ~ 27603702 (+)
G230904 NA other downstream 969468 27941321 ~ 27947473 (+)
G230975 NA other downstream 1085878 28057731 ~ 28058218 (+)
trnat-ugu_41 NA other downstream 1498953 28470806 ~ 28470878 (+)

Expression


Co-expression Network