Gene
RNA
| Item | Value |
|---|---|
| gene id | LOC120553792 |
| gene name | NA |
| gene type | non-coding |
| species | eurasian perch (Perca fluviatilis) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_053134.1 |
| NCBI id | CM020931.1 |
| chromosome length | 29109922 |
| location | 26986068 ~ 26986741 (-) |
| genome version | GENO_Pfluv_1.0_2020_eurasian_perch_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU312875 | False | 264 | lncRNA | 0.56 | 3 | 26986099 | 26986741 |
| XR_005638206.1 | True | 295 | lncRNA | 0.55 | 3 | 26986068 | 26986741 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| tmem178b | tmem178b,LOC107725619 | coding | downstream | 621399 | 26261625 ~ 26364669 (-) |
| tmem121b | cecr6,LOC102790305 | coding | downstream | 814815 | 26169109 ~ 26171253 (-) |
| LOC120553108 | LOC106676404,LOC106675180,LOC106675933,LOC106633052 | coding | downstream | 846034 | 26128814 ~ 26140034 (-) |
| rergla | rergl,LOC104934027 | coding | downstream | 865750 | 26113800 ~ 26120318 (-) |
| lmo3 | lmo3,LOC107550907,LOC107757261 | coding | downstream | 1084067 | 25856640 ~ 25902001 (-) |
| cog5 | cog5,LOC102792593 | coding | upstream | 64530 | 27051271 ~ 27165117 (-) |
| LOC120553064 | NA | coding | upstream | 180689 | 27167430 ~ 27175049 (-) |
| tmtc1 | tmtc1 | coding | upstream | 302111 | 27288852 ~ 27476902 (-) |
| caprin2 | caprin2 | coding | upstream | 574183 | 27560924 ~ 27599908 (-) |
| recql | recql | coding | upstream | 626635 | 27613376 ~ 27634574 (-) |
| G230717 | NA | non-coding | downstream | 14204 | 26963790 ~ 26971864 (-) |
| G230714 | NA | non-coding | downstream | 41109 | 26942312 ~ 26944959 (-) |
| G230634 | NA | non-coding | downstream | 387661 | 26598207 ~ 26598407 (-) |
| G230596 | NA | non-coding | downstream | 603693 | 26382172 ~ 26382375 (-) |
| G230582 | NA | non-coding | downstream | 727279 | 26256009 ~ 26258789 (-) |
| trnaw-cca_36 | NA | non-coding | upstream | 14311 | 27001052 ~ 27001123 (-) |
| G230757 | NA | non-coding | upstream | 224006 | 27210747 ~ 27222013 (-) |
| G230760 | NA | non-coding | upstream | 235484 | 27222225 ~ 27222424 (-) |
| G230815 | NA | non-coding | upstream | 493361 | 27480102 ~ 27480367 (-) |
| G230818 | NA | non-coding | upstream | 510450 | 27497191 ~ 27497565 (-) |
| G230594 | mrps33 | other | downstream | 604703 | 26375692 ~ 26381365 (-) |
| mkrn1 | mkrn1 | other | downstream | 789558 | 26171320 ~ 26196510 (-) |
| LOC120553115 | NA | other | downstream | 1384688 | 25595578 ~ 25601380 (-) |
| sult4a1 | sult4a1,LOC102784496 | other | downstream | 1768375 | 25191261 ~ 25217693 (-) |
| G229950 | gdi2,LOC100708443,LOC102215003 | other | downstream | 3071376 | 23908556 ~ 23914692 (-) |
| G230730 | NA | other | upstream | 130465 | 27117206 ~ 27118597 (-) |
| ipo8 | ipo8 | other | upstream | 515359 | 27502100 ~ 27550712 (-) |
| LOC120553767 | LOC104927640,LOC103363517 | other | upstream | 1354341 | 28341082 ~ 28430526 (-) |
| G231126 | NA | other | upstream | 1757862 | 28744603 ~ 28745246 (-) |
| G231136 | NA | other | upstream | 1805264 | 28792005 ~ 28792745 (-) |
