G230757


Basic Information

Item Value
gene id G230757
gene name NA
gene type non-coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053134.1
NCBI id CM020931.1
chromosome length 29109922
location 27210747 ~ 27222013 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>TU312917
tgctagctgtcccccggcagaccccgagcagccgggcgagtgggtgactgtccgagggaagcgtagcgttagatctagaccagggagtgcacatgatgacggtcgctctaaaccggagcgtcttcgcctctctaacagtttctccctactcagcgatacacccgctgagaagccagttctggttattgggagctctatactgcgatatgtgaagccagcggccccgggcggacagtaggcctacctacggtcatatgtgcccccggggctggagcgggcgatatagaaacccatctaaaactgctggcaaaaaagaaccgtaaatacagtaagatcatacttcacgtaggtggtaatggtcgtaaatcggagatcactaaaatgaatgttgagtcactttgtgcatacgcaaagacaatgtcggactcagtagttttctctggacccctgccaaacctgaccaatgatgaaatgtacagccgtacgtcatccttccaccgctggttgtcggggtggtgcccagctaatgatgtgggctatgtgaataactggagggcgttctggggaaagcctggtctgattgagagagacggcattcatcccacctgggacggtgccgctctcatatcaaaaaatctgaacgagtttatcagacataaaccatgacaacccaagtttgatattagtaatcagaggtgcagtgctacgcgcccctctgtgcttccgttggagcagtcgcccactcatggtctaataagcacggtgtctgtcccccggctcagatcggttaaatcaaaggtaaacaaaagatgcgctatacttaacaacctaattggaattaaaactactgcaatagaacaaaataggaaaattagatgtggactattaaatattagatctctgtcttctaaagcagtactggtaaacgagttgatatcagacaataaaattgatttattttgtcttactgaaacctggctgggccatgaagactatgttagtctaaatgaagccactcctcccagccatattaatactcaaattcctagaggctcaggccgaggagggggagttgcagccatctttgatgcaagcctgctaattactcctaaacctaaattacattataactcatttgaaagtcttgttcttaatcttcaacatccaaaatggaaaacattacagccaattatattcgttgttatttacagggctccaggtccgtattctgaatttttatctgaattctcagagtttttatcatgtttagtccttaaatcagaccaagtacttcttgtaggtgattttaatatccatgtggacgttgacaatgacagccttagtactgctttcaactcattactggattcaatcggtttcagtcagagtgtgcacaaggcgacgcactgttttaaccacaccccgaccttgtgctggcatatggtattgaaattgaggatttaataatattttcgcagaattcggtattatcagatcattctttaatcactttcgaattcttactacctgattatattaaattagataaaagctcctacaccagatgcttatctgacagtgctatagctaaatttaaagaagatattccaacagcattcgactctatgtcatgccttaacataacagaggacctgtatgttaacctcagtccctctcaaattgatgcatttgtagacggtgttacg
>TU312918
gtgaggagttgcagtgttcacctaactggcccaactgcttctcttcataattgttagattaataatacataacaaagtagagggaggcaggccagccaagccagatccggcagggggagagttctaagcccgaaaaagctacctctccttatgacctgtctctcttagttacctgttatagttacgctgttatagttctagactgccgggggacttccttcctttgacacactgagctgctctctcctctccctttctattactgttactattactattactattactatttgtgtgcagcccgtcccagaaatgcttgttactaatcctagcttctggggagtttactccccggagtccttatgcttttttcccccagcgtatttccttggagaacgttggcaccaagatcctggttgcagctgtcgccgtggtcctgctgcactccctgctgagctcagcgatgccctgcaatgtcatgctgcgtcctgctgaaccctgcagcttcccgctacatccagtcactgttccattattaatgtgactactatcgccactgttcatcacacccccaaccggctcgtcagacaccgcctaccaagagcctgggtctgtccgaggtttcttcccaagagggagtttttcctcgccactgtcgcactgcttgctcttgagggaattactggaattgttggaattgttggggctttgtaaattatagagtgtggtctagacctactctatctgtaaagtgtctcgagataacttatgttatgatttgatactataaataaaattgaattgaattgaat

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU312917 True 1706 lncRNA 0.44 2 27213620 27222013
TU312918 False 812 lncRNA 0.47 2 27210747 27218255

Neighbor

gene id symbol gene type direction distance location
LOC120553064 NA coding downstream 35698 27167430 ~ 27175049 (-)
cog5 cog5,LOC102792593 coding downstream 45630 27051271 ~ 27165117 (-)
tmem178b tmem178b,LOC107725619 coding downstream 846078 26261625 ~ 26364669 (-)
tmem121b cecr6,LOC102790305 coding downstream 1039494 26169109 ~ 26171253 (-)
LOC120553108 LOC106676404,LOC106675180,LOC106675933,LOC106633052 coding downstream 1070713 26128814 ~ 26140034 (-)
tmtc1 tmtc1 coding upstream 66839 27288852 ~ 27476902 (-)
caprin2 caprin2 coding upstream 338911 27560924 ~ 27599908 (-)
recql recql coding upstream 391363 27613376 ~ 27634574 (-)
gys2 gys2,LOC101474059 coding upstream 428690 27650703 ~ 27692724 (-)
ldhba ldhb coding upstream 482782 27704795 ~ 27732941 (-)
trnaw-cca_36 NA non-coding downstream 209624 27001052 ~ 27001123 (-)
LOC120553792 NA non-coding downstream 224006 26986068 ~ 26986741 (-)
G230717 NA non-coding downstream 238883 26963790 ~ 26971864 (-)
G230714 NA non-coding downstream 265788 26942312 ~ 26944959 (-)
G230634 NA non-coding downstream 612340 26598207 ~ 26598407 (-)
G230760 NA non-coding upstream 212 27222225 ~ 27222424 (-)
G230815 NA non-coding upstream 258089 27480102 ~ 27480367 (-)
G230818 NA non-coding upstream 275178 27497191 ~ 27497565 (-)
G230826 NA non-coding upstream 331748 27553761 ~ 27554499 (-)
G230853 NA non-coding upstream 383446 27605459 ~ 27605806 (-)
G230730 NA other downstream 92150 27117206 ~ 27118597 (-)
G230594 mrps33 other downstream 829382 26375692 ~ 26381365 (-)
mkrn1 mkrn1 other downstream 1014237 26171320 ~ 26196510 (-)
LOC120553115 NA other downstream 1609367 25595578 ~ 25601380 (-)
sult4a1 sult4a1,LOC102784496 other downstream 1993054 25191261 ~ 25217693 (-)
ipo8 ipo8 other upstream 280087 27502100 ~ 27550712 (-)
LOC120553767 LOC104927640,LOC103363517 other upstream 1119069 28341082 ~ 28430526 (-)
G231126 NA other upstream 1522590 28744603 ~ 28745246 (-)
G231136 NA other upstream 1569992 28792005 ~ 28792745 (-)
G231143 NA other upstream 1612253 28834266 ~ 28837740 (-)

Expression


Co-expression Network