G230783



Basic Information


Item Value
gene id G230783
gene name NA
gene type non-coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information


Item Value
chromosome id NC_053134.1
NCBI id CM020931.1
chromosome length 29109922
location 27471088 ~ 27472678 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence


>TU312947
TGCAGATCCTGAAGTCGAACTCCCAGTGACCCCATGCATCCTAGTCAGAGGTGACCAGCAATTCAAGATTGCTCTTGATGGGTTACTTGTCAATGACCACATCACCTCTCCCATTGTGGCCTTGAGCTACGTCTTCTCCATGTTTTATGTCTGCAACATCCAATACCCACCGGAGATGGCTTTTACTCTCGAATTCATGCAAAGagtTTTCTTTGGGATCAATCCTGAGCGAGGCTCCAAGGCAGAGAAGAAGGGGAAGAAACGGCACTTCATTCCTCCACAGGTGTGCAAGCTGGTTTCTCAGCTGAAGGAATTTGAATGCAAGCAGAAGGAATCTGAGTGG

Function


GO: NA

KEGG: NA

RNA


RNA id representative length rna type GC content exon number start site end site
TU312947 True 343 lncRNA 0.48 3 27471088 27472678

Neighbor


gene id symbol gene type direction distance location
LOC120553763 NA coding upstream 198873 27253416 ~ 27272215 (+)
LOC120553521 NA coding upstream 239697 27224262 ~ 27231391 (+)
gpr22a gpr22,LOC103362561,LOC104950263 coding upstream 324297 27138046 ~ 27146791 (+)
ndufa5 ndufa5 coding upstream 419806 27046066 ~ 27051282 (+)
aebp2 LOC103362558,LOC104950851 coding upstream 426671 27019362 ~ 27044417 (+)
golt1ba golt1b,LOC101473753,LOC106532178,LOC103459552,LOC106907182,LOC105929813,LOC102297447 coding downstream 164410 27637088 ~ 27644879 (+)
spx spx coding downstream 175325 27648003 ~ 27651082 (+)
kiss2 NA coding downstream 222946 27695624 ~ 27696717 (+)
LOC120553234 LOC104948514,LOC103363512 coding downstream 377059 27849737 ~ 27959398 (+)
LOC120552999 NA coding downstream 544165 28016843 ~ 28023618 (+)
G230774 NA non-coding upstream 187813 27282953 ~ 27283275 (+)
G230773 NA non-coding upstream 188169 27282499 ~ 27282919 (+)
G230746 NA non-coding upstream 238050 27232394 ~ 27233038 (+)
G230685 NA non-coding upstream 354194 27115926 ~ 27116894 (+)
G230658 NA non-coding upstream 590101 26880507 ~ 26880987 (+)
G230786 NA non-coding downstream 12039 27484717 ~ 27484946 (+)
G230787 NA non-coding downstream 13035 27485713 ~ 27486087 (+)
G230788 NA non-coding downstream 20881 27493559 ~ 27493792 (+)
G230789 NA non-coding downstream 23518 27496196 ~ 27496694 (+)
G230790 NA non-coding downstream 24557 27497235 ~ 27497601 (+)
LOC120553194 NA other upstream 398536 27069077 ~ 27072552 (+)
LOC120553759 NA other upstream 499235 26693356 ~ 26971853 (+)
mrps33 mrps33,LOC106591474 other upstream 1089979 26372714 ~ 26381109 (+)
arhgef39 arhgef39 other upstream 1364265 26038188 ~ 26106823 (+)
LOC120553706 NA other upstream 1658260 25810407 ~ 25812828 (+)
G230842 NA other downstream 130327 27603005 ~ 27603702 (+)
G230904 NA other downstream 468643 27941321 ~ 27947473 (+)
G230975 NA other downstream 585053 28057731 ~ 28058218 (+)
trnat-ugu_41 NA other downstream 998128 28470806 ~ 28470878 (+)
trnak-uuu_24 NA other downstream 998428 28471106 ~ 28471178 (+)

Expression



Co-expression Network