G230853



Basic Information


Item Value
gene id G230853
gene name NA
gene type non-coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information


Item Value
chromosome id NC_053134.1
NCBI id CM020931.1
chromosome length 29109922
location 27605459 ~ 27605806 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence


>TU313025
tgtctatccactgtcactatcgaataaaaaataataaaaagatgaatgactagtccagctgagcaggcgtcaagtatgcctttccagttcaataaaccaagtactgccatctgactcacacatcacaagacagtgttacaattaattaaatcataccAAAGCGTTGTATGGCTCAAGACTATGGCGATATAGTACTCACTAAAAATCAcccaagcagaaagcacaatagtaattctgaaacgtgattgactgaagatacaacaatgccatcacacaacacagctgagcgcaggttgttaaataacagtcacttagtcagctgcaacttcacaaactgcaaaagccaac

Function


GO: NA

KEGG: NA

RNA


RNA id representative length rna type GC content exon number start site end site
TU313025 True 348 lncRNA 0.39 1 27605459 27605806

Neighbor


gene id symbol gene type direction distance location
caprin2 caprin2 coding downstream 5551 27560924 ~ 27599908 (-)
tmtc1 tmtc1 coding downstream 128557 27288852 ~ 27476902 (-)
LOC120553064 NA coding downstream 430410 27167430 ~ 27175049 (-)
cog5 cog5,LOC102792593 coding downstream 440342 27051271 ~ 27165117 (-)
tmem178b tmem178b,LOC107725619 coding downstream 1240790 26261625 ~ 26364669 (-)
recql recql coding upstream 7570 27613376 ~ 27634574 (-)
gys2 gys2,LOC101474059 coding upstream 44897 27650703 ~ 27692724 (-)
ldhba ldhb coding upstream 98989 27704795 ~ 27732941 (-)
slc25a3a slc25a3 coding upstream 157077 27762883 ~ 27779183 (-)
LOC120553860 NA coding upstream 158588 27764394 ~ 27764592 (-)
G230826 NA non-coding downstream 50960 27553761 ~ 27554499 (-)
G230818 NA non-coding downstream 107894 27497191 ~ 27497565 (-)
G230815 NA non-coding downstream 125092 27480102 ~ 27480367 (-)
G230760 NA non-coding downstream 383035 27222225 ~ 27222424 (-)
G230757 NA non-coding downstream 383446 27210747 ~ 27222013 (-)
G230920 NA non-coding upstream 155649 27761455 ~ 27761660 (-)
G230933 NA non-coding upstream 335226 27941032 ~ 27947477 (-)
G230946 NA non-coding upstream 368879 27974685 ~ 27976238 (-)
G230947 NA non-coding upstream 370704 27976510 ~ 27976727 (-)
G230965 NA non-coding upstream 418206 28024012 ~ 28024491 (-)
ipo8 ipo8 other downstream 54747 27502100 ~ 27550712 (-)
G230730 NA other downstream 486862 27117206 ~ 27118597 (-)
G230594 mrps33 other downstream 1224094 26375692 ~ 26381365 (-)
mkrn1 mkrn1 other downstream 1408949 26171320 ~ 26196510 (-)
LOC120553115 NA other downstream 2004079 25595578 ~ 25601380 (-)
LOC120553767 LOC104927640,LOC103363517 other upstream 735276 28341082 ~ 28430526 (-)
G231126 NA other upstream 1138797 28744603 ~ 28745246 (-)
G231136 NA other upstream 1186199 28792005 ~ 28792745 (-)
G231143 NA other upstream 1228460 28834266 ~ 28837740 (-)

Expression



Co-expression Network