G230900


Basic Information

Item Value
gene id G230900
gene name NA
gene type non-coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053134.1
NCBI id CM020931.1
chromosome length 29109922
location 27968060 ~ 27971245 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>TU313083
tttcttttaacaacttttcatctttaacgtcttaagatggcacagaccgagtttgaagttgatcggatgaaatctctaggaggagttcgttaaagtacgacatgtggaaatggccaaaatcgcactaatttcaactttgaaatcaaaatggcggacttcctgttgggtttagggtattgctctaatgaagttttgtgtacgtcttgacatgttacatatgtgtaccaagtttcgtgagtctacgttaaacgcactggaggggctcaattttcttaactttgtagggggcgctagcgagccatttttgtgcgcctattcccgaaacccttaaaatacgtaaatattcaccagacttgatgcggccgccaaatttggtgagtttttgaatatattaagcccctcaaaaagccaattcatttaaCGGGAAagtaatagaagaaagaaagaaagaataataattccttcagtttcaatagggcctttgccgctgtcagcgctcgggccctaataatattTCTCCAAAGTTGACAGGTAGGCTATgtaaattaattcatttcacAATTTCACCTTTCTACATCAAATCCGTTTACCTTTGCAAGCATCGTCCTCCCTTGGGGAAACCCATCGATATATGGGGGAAACCAACCAAACTAAACGGGAATGAGGGAGGAATGAATAACACTTGCATTTGATGCTTTCGTTTTACTATCAGTAGCCGAtatcccatggatgtattaacgATATCCCTGCTTGACATTAGAGGAAGGGACCCGACGGTGTGATTGGTCgaactcttcttctttagtttttttttccagcatgctcGTGGCTGCTACGCTGTTTTAGCCATAAGTTTTAGCTGCCTACTATCATCAAGAGATAGACTGAGACGGCTACTGCACGTCAACGAGTGAACCCAAAGCAGTCACCTGATTTTCGCgtagtttaaagtgacaaatcgtatcaccgtattttgatgtcaaaatgcgTATCTACTAcacaggttggcaggtctgcatAGTGCAGTTGAGTAGCTAAATGCTGCCTATGTCAACAGTCATGAAAGCCTGTGATCTTGCGGAGCTATGTATCTGGCTGATAGTCACCTTTTATCGGTaaaatgtaacaacaacaaccgcTAAAAGACTGCGACCTTGAGGAGCTCTGTACATGGCTGACAGCCACCCTTTCTCGGCTAAATGTTACTGTAACAACCGCTAAAACTACTTCTAAAAGCAGCTTGATACActgtacattacacattatggttGCATGTCAGTTTGTAACAAAGTGGGAATCATCTTACTGTTCAACATATCATAACCTTGAAGCTGAAGCTAGTAACATTAGCCACAAGAATATTCCATAACGTAACATACCATACATTGCAGAGCGACCTGTAGAGAACGTTAACATTGTCCCAATTCAACAATTCAGGCTACACGTTGTTTTGCTGAAGTTAAATTGGATGTTTCCATTATGAGGAAGTCAAACTCGCAGTTTCTGTCATATGTCTGTCACGGTGGTTGTTaccagccatggcccgcttgcccgATCctctggtaacgttagcagttagcatgtGTTAGCATGGCAGCGTTAGCCATCACAAGTTGGGTTCACTTCACTGACTGTGTCTTAATATTTTTTGCGAGTAAATATCTTGAGTACACTATGTAATTTAATGccagtacacaaatgttgaaatgactgaaaatgcccatccctaccACTAACattagccgtgataaattaccGTAAAGCtcaatgcttacctgttcaggattAAATTAGCCAACTCAGTGTCCTTTTGGGCTCAAAAGCTGGCCCGTGTTTTACCACATCTCTGGTCATGCAACTGCTAGAAAGATGCAGTTTTTTTAGTTCAGGTAGAATAAATCTATCTCTGTTAATCCAGTTGTCAGAATGGAAATTTCAatggagaaaatactggctttagcaCTGTAGTCAgagaagatagtatttcaacttagcatgttttcttaatatctgatgacatattgtggtcagtttttatttaaagtgctcatattatgctcattttcaggttcataattgtatttagaggttgtaccagaataggtttacatggtttaattttcaaaaaacacaattttttgttgtactgcacattgctgcagctcctcttttcaccatgTGTTGAGCTGTCTGTTTTagttacagagtgagacatctcacttctgttcctatctttgttgggagtcgcacatgcgcagtagctaggtaagcactgctagcttgtcagttgcagagcatgaggtcgtgccacgctagcagctaggcgagcattataacgtgtgttacaaagtgacgcacattcgTCACggaaggctggactacaattgagctgtttggagcagtttgtgaacactCTTTTCTCTgaaagatggtaagtccctttggggtggactgtgggcttttttactttgtaaacctataacatgcacaaaaagatatataacacaataaaggaaagtgaAAAGGCcagaaagcataatatgagcactttaaaacagtAAATGTATTACATATTGCTCCCGTAAGTGATCATTGCTCAAAATGTGTCATATATTGCCAAACTTTGCATCAATTGAGTTAAAATATGTATCATTTGTAGATGGAATTTTGTTCACTAGTGCCAAAGTACCTTAAAATGCAAAATCCAAGTCAAAGTAAATGGTGGTTCTCCTCGGCAAGCCAGTATGGACAACAGTACGGAGTGACAATGTAAATCCTGGTTTCTGTTGCAGATATACGAAAACCTATATCACACATAACACATTTGACAAAAAACCAAGCCCCAAAACACATTGTAACCTTGCTCAGCAGTACAGAATGTATATAACAGTGTCTAGACACACCTGCTTAGGTAGAGAAAGTGTCTTTGTGGCTCCACCCCCTGCATTAAAAATCAAGATCTGTCTGTCTAGCTAAAACTCCAATCTCCTGTCACTGTATCAACTTATCACACAACACTATTGATTCAcagttttatttaattgtaatcAAACCTTACTTGGTCATGCTGAGAGTTAGCTGAGCTAATGCCCTGCTGTTCAAACATCCAGACTGTTAAATGTCATACCACTAAATGTGACCGATGCCTGTTTGCTTTTTGACCACTTTATATGCACGTGTACATAG

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU313083 True 3186 lncRNA 0.40 1 27968060 27971245

Neighbor

gene id symbol gene type direction distance location
LOC120553234 LOC104948514,LOC103363512 coding upstream 8662 27849737 ~ 27959398 (+)
kiss2 NA coding upstream 271343 27695624 ~ 27696717 (+)
spx spx coding upstream 316978 27648003 ~ 27651082 (+)
golt1ba golt1b,LOC101473753,LOC106532178,LOC103459552,LOC106907182,LOC105929813,LOC102297447 coding upstream 323181 27637088 ~ 27644879 (+)
LOC120553763 NA coding upstream 695845 27253416 ~ 27272215 (+)
LOC120552999 NA coding downstream 45598 28016843 ~ 28023618 (+)
LOC120553593 LOC104927640,LOC103363517,LOC102305443 coding downstream 178487 28149732 ~ 28293546 (+)
LOC120553840 NA coding downstream 609242 28580487 ~ 28580602 (+)
LOC120553854 NA coding downstream 840607 28811852 ~ 28811952 (+)
LOC120553851 NA coding downstream 842080 28813325 ~ 28813435 (+)
G230881 NA non-coding upstream 168028 27779356 ~ 27800032 (+)
G230879 NA non-coding upstream 188982 27762876 ~ 27779078 (+)
G230878 NA non-coding upstream 207945 27759598 ~ 27760115 (+)
G230866 NA non-coding upstream 229861 27656020 ~ 27738199 (+)
LOC120552997 NA non-coding upstream 265423 27699063 ~ 27702637 (+)
G230907 NA non-coding downstream 690 27971935 ~ 27973192 (+)
G230901 NA non-coding downstream 2056 27973301 ~ 27974585 (+)
G230908 NA non-coding downstream 3606 27974851 ~ 27976209 (+)
G230902 NA non-coding downstream 5209 27976454 ~ 27976871 (+)
G230948 NA non-coding downstream 15894 27987139 ~ 27987461 (+)
G230904 NA other upstream 20587 27941321 ~ 27947473 (+)
G230842 NA other upstream 364358 27603005 ~ 27603702 (+)
LOC120553194 NA other upstream 895508 27069077 ~ 27072552 (+)
LOC120553759 NA other upstream 996207 26693356 ~ 26971853 (+)
mrps33 mrps33,LOC106591474 other upstream 1586951 26372714 ~ 26381109 (+)
G230975 NA other downstream 86486 28057731 ~ 28058218 (+)
trnat-ugu_41 NA other downstream 499561 28470806 ~ 28470878 (+)
trnak-uuu_24 NA other downstream 499861 28471106 ~ 28471178 (+)
LOC120553833 NA other downstream 529989 28501234 ~ 28501419 (+)
LOC120553776 NA other downstream 641310 28612555 ~ 28630012 (+)

Expression


Co-expression Network