G230933


Basic Information

Item Value
gene id G230933
gene name NA
gene type non-coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053134.1
NCBI id CM020931.1
chromosome length 29109922
location 27941032 ~ 27947477 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>TU313122
gatactccttccatttcaatattatcgcttgcacagtgctccttgggatgtttaaaacttgggaaatctttttgtatccaaatccggctttaaacttctccacaacagtatctcggacctgcctggtgtgttccttgttcttcatgatgctctctgcgctttaaacggacctctgagactatcacagagcaggtgcatttatacggagacttgattacacacagctggattctatttatcatcattagtcatttaggtcaacattggatcattcagagatcctcactgaacttctggagagagtttgcggcactgaaagtaaaggggctgaataattttgcacgcccactttttcagttttttatttgttaaaaaagtttgaaatagccaatgaatttcgttccacttcataattgggacccacttgttgttgattcttcacaaaaaattacagttttatatctttatgtttgaggcctgaaatgtgtcaaaaggtcgaaacgttcaagggggc
>TU313123
gccagatttgtgcagtatacgactgattgttgtcctatggacagagtctcccacctcagctgtagatctctgcagttcatccagagtgatcatgggcctcttggctgcatctctgatcagtcttctcattgtatgagctgaaagtttagagggacggccgggtcttcgtagatttgtagtggtctgatactccttccatttcaatattatcgcttgcacagtgctccttgggatgtttaaagcttgggaaatctttttgtatccaaatccggctttaaacttctccacaacagtatctcggacctgcctggtgtgttccttgttcttcatgatgctctctgcgctttacacggacctctgagactatcacagagcaggtgcatttatacggagacttgattacacacagctggattctatttatcatcattagtcatttaggtcaacattggatcattcagagatcctcactgaacttctggagagagtttgcggcactgaaagtaaaggggctgaataattttgcacgcccactttttcagttttttatttgttaaaaaagtttgaaatagccaatgaatttcgttccacttcataattgggacccacttgttgttgattcttcacaaaaaattacagttttatatctttatgtttgaggcctgaaatgtgtcaaaaggtcgaaacgttcaagggggc

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU313122 False 514 lncRNA 0.39 2 27941032 27947287
TU313123 True 699 lncRNA 0.42 2 27941032 27947477

Neighbor

gene id symbol gene type direction distance location
LOC120553236 strap coding downstream 78946 27848579 ~ 27862086 (-)
tmpoa tmpo coding downstream 92869 27798509 ~ 27848163 (-)
slc25a3a slc25a3 coding downstream 161849 27762883 ~ 27779183 (-)
LOC120553859 NA coding downstream 167527 27773303 ~ 27773505 (-)
LOC120553860 NA coding downstream 176440 27764394 ~ 27764592 (-)
LOC120552998 NA coding upstream 86020 28033497 ~ 28037035 (-)
LOC120553766 LOC107743936,LOC107602777 coding upstream 179109 28126586 ~ 28132212 (-)
LOC120553769 NA coding upstream 617422 28564899 ~ 28566747 (-)
LOC120553775 NA coding upstream 620508 28567985 ~ 28577657 (-)
LOC120553219 NA coding upstream 795045 28742522 ~ 28743502 (-)
G230920 NA non-coding downstream 179372 27761455 ~ 27761660 (-)
G230853 NA non-coding downstream 335226 27605459 ~ 27605806 (-)
G230826 NA non-coding downstream 386533 27553761 ~ 27554499 (-)
G230818 NA non-coding downstream 443467 27497191 ~ 27497565 (-)
G230815 NA non-coding downstream 460665 27480102 ~ 27480367 (-)
G230946 NA non-coding upstream 27208 27974685 ~ 27976238 (-)
G230947 NA non-coding upstream 29033 27976510 ~ 27976727 (-)
G230965 NA non-coding upstream 76535 28024012 ~ 28024491 (-)
G230977 NA non-coding upstream 117073 28064550 ~ 28064829 (-)
G230984 NA non-coding upstream 140195 28087672 ~ 28088184 (-)
ipo8 ipo8 other downstream 390320 27502100 ~ 27550712 (-)
G230730 NA other downstream 822435 27117206 ~ 27118597 (-)
G230594 mrps33 other downstream 1559667 26375692 ~ 26381365 (-)
mkrn1 mkrn1 other downstream 1744522 26171320 ~ 26196510 (-)
LOC120553115 NA other downstream 2339652 25595578 ~ 25601380 (-)
LOC120553767 LOC104927640,LOC103363517 other upstream 393605 28341082 ~ 28430526 (-)
G231126 NA other upstream 797126 28744603 ~ 28745246 (-)
G231136 NA other upstream 844528 28792005 ~ 28792745 (-)
G231143 NA other upstream 886789 28834266 ~ 28837740 (-)

Expression


Co-expression Network