G231108



Basic Information


Item Value
gene id G231108
gene name NA
gene type non-coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information


Item Value
chromosome id NC_053134.1
NCBI id CM020931.1
chromosome length 29109922
location 28612458 ~ 28621025 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence


>TU313326
GTTTCACTGTAGGCTTAGGGTTGAATGCTTGGCATTGGGGACAGGTCTTGGTTACCTGCTCTACCATTGGTTTCATGAATGGATGCCACCAATGTTGTAGGTTTCTCAACATCTGACTGATTCCCTACGTCTCCCCCCTGAGCTTCTTCTAGGGCCGTCTCCGTACCCCTGGTGGCAGAATAGGTCTACCATCCGGGCCCCGCCACAACCCCTCACTTTGTATAGCTCCCCTGCTTTTCCAAACTGTTTTTTCTTGGGGGGAAGCTCGTGCTTGTAACTCAATGATTGTTTCTTTGCTAAGCTCGGCCCTGGTTTCTAGGTCTGCAGTCATCATTAGATGGTGTGCCAAATATCCTGCTGCGGTTTTTGCGGCGCTGTCTGCTGCTTCATTTCCCTTACTCACTCTATCTTGAGTATTGCTGTGGCCCTTACATTTGACTATAGCTACCTTGGCTGGTAGGAGAATAGCTTTTGCTAATCTTTTCATTTCTTCCTCATGTTTAATAGGTTTTCCTCCTGCTGTCAAAAACCCTGCTCTCTGCCACTGTGGTAATTCGAGGTGAGCTGCTCCTGTTGCATAGGCTGAGTCAGAGTATACAGTTACAGCTTGATTTTTCCTAGCTCTAAGGCTCTGATGAGTGCTTCCACTTCTGCTTTCTGTGCTGACTGCGCACCTTGCATCTTTTCTGCTTCTAATGTTACCACTTCC

Function


GO: NA

KEGG: NA

RNA


RNA id representative length rna type GC content exon number start site end site
TU313326 True 709 lncRNA 0.48 2 28612458 28621025

Neighbor


gene id symbol gene type direction distance location
LOC120553775 NA coding downstream 34801 28567985 ~ 28577657 (-)
LOC120553769 NA coding downstream 45711 28564899 ~ 28566747 (-)
LOC120553766 LOC107743936,LOC107602777 coding downstream 480246 28126586 ~ 28132212 (-)
LOC120552998 NA coding downstream 575423 28033497 ~ 28037035 (-)
LOC120553236 strap coding downstream 750372 27848579 ~ 27862086 (-)
LOC120553219 NA coding upstream 121497 28742522 ~ 28743502 (-)
LOC120553817 NA coding upstream 191420 28812445 ~ 28812635 (-)
LOC120553832 NA coding upstream 192908 28813933 ~ 28814120 (-)
LOC120553827 NA coding upstream 199465 28820490 ~ 28820685 (-)
LOC120553130 LOC101882356 coding upstream 256570 28877595 ~ 28879359 (-)
LOC120553141 NA non-coding downstream 45258 28567029 ~ 28567200 (-)
G231048 NA non-coding downstream 223573 28388538 ~ 28388885 (-)
G231047 NA non-coding downstream 230891 28381321 ~ 28381567 (-)
G231042 NA non-coding downstream 271436 28340120 ~ 28341022 (-)
G231012 NA non-coding downstream 317889 28293893 ~ 28294569 (-)
G231116 NA non-coding upstream 45888 28666913 ~ 28667128 (-)
G231119 NA non-coding upstream 107345 28728370 ~ 28728600 (-)
G231123 NA non-coding upstream 123046 28744071 ~ 28744338 (-)
G231134 NA non-coding upstream 165400 28786425 ~ 28786704 (-)
G231141 NA non-coding upstream 212171 28833196 ~ 28833559 (-)
LOC120553767 LOC104927640,LOC103363517 other downstream 181932 28341082 ~ 28430526 (-)
ipo8 ipo8 other downstream 1061746 27502100 ~ 27550712 (-)
G230730 NA other downstream 1493861 27117206 ~ 27118597 (-)
G230594 mrps33 other downstream 2231093 26375692 ~ 26381365 (-)
mkrn1 mkrn1 other downstream 2415948 26171320 ~ 26196510 (-)
G231126 NA other upstream 123578 28744603 ~ 28745246 (-)
G231136 NA other upstream 170980 28792005 ~ 28792745 (-)
G231143 NA other upstream 213241 28834266 ~ 28837740 (-)

Expression



Co-expression Network