mcm10 (mcm10,LOC102783079)


Basic Information

Item Value
gene id mcm10
gene name mcm10,LOC102783079
gene type coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053134.1
NCBI id CM020931.1
chromosome length 29109922
location 20394066 ~ 20409676 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>XM_039791000.1
CCCTCGCTCTCAATGCTCGCTCTCTATGCTCGCTCCGAGTGCAGGTTGTAAAGACTAGCTACAAGATTAATATCTCGATTTTTATCAAATATAACCCATGACTTGTACATAACTACGCGCAGTGCTAATTATTGGGGAACAAACAACACATTGACAGGTTGGAAGTAGTTGAAAAATCCATCAAATTTGTATTAGAGCTAGCAAAGGACACAAAGCTGTAACATTACCGTCAAGCTCTAGAACCAGAGGTCACCAGTTCATCTAAAATCAGTACCAACATTCACATCTCTAAAATGGAAAGTGAGGATGATCTGGACATTCTGACGGCGCTGCTGGCTGAGAGCGAGGGAGTCGGAGAAGAGCAGGGCGGTCAGGAGCAGGCAGACGACTTGGACGGCCTGTTTGATGCCGACAATGACGAGGAAGAAGAGTACAAAGAGGGCGTCGAGGAGGAAGGGCGAGATGTGTCGGATCTCTTTGGAGATGTGGAAGACattgaaaatgaagagaaagacactaaaagaaaagaaagtggtGGAGAAGCCTGCGAGAGCCTGGACAGGTCAAAGGAGGATTTACAAGATGAGCTGAGGCGCATGCAGGAGCAAATGCAGCggttgcagcagcagctggaagCAAGCCAGAAGGTTTCCACCTCATCTTCCCCTCCGGTCACGGCTGCAGGGAGCACGGCTCGTCCAAAACCAGTCACTCCCAAACCGACACGCACTCCACAGCCGACCGCCAAACTGGCCCAGGCCAAACCCACCTCTACCACACCGAAGACCAAGGCACAATCAGCAGCAACATCTTCACCCGCTccagtcagaggaggagatCTGAAGCTCCAGGAGTCCTCTGACTTTTTTGATCAGCTGAACAATGCTGACTCCTTCAAACGTAAACCCCGGCTAGCTCATCATCCCAAACCAAGCACGTCGCCAGAAGACAGAGGGCCGCTGGTGGAGATAAAGCTTGGCAGCTCCTTCCAGCCAGTAGAGAGCACCAGCCAAGCTTTCAATCCTGTGCGTTCACCTCCAGCCTCTCAGAGCAAACCTGCATTGGCTGCATCAGCAGGACAGCCCAaaccttctcctcttcctccccttccTAAAGATGTGGGGGTTGAGAAATACTCAGGACTGCGGCTCAGAAAACCGCGCGTTTCCTCCAGCGAGATGGACCGCAAGATGGCCGACCGCCGTCTAATCCGTCTGTCCCAGGTACCGGAGCGCGCGGCTCGAGAGAAGCTGGAGGATAGCGATTGGGTGACTTTCGCTGTGCTGGTCAACAAAGTCACTCAacaaagcagcagcagtGGCAAAACCTTCAGCATCTGGAAACTGAACGACCTCCATAACCTGGaagtgtttgtgtctctgctcCTGTTCGGCGAAGTTCACAAAGAGCACTGGAAAACGGAGACGGGCACCGTCATCGGACTCCTCAACCCAAACCTCATGAAGCAGAAAGAAGGATATGACGGGGTGAGCCTGACGGTGGACAACCCCCAGAAGGTGTTGCTGATGGGCGAGGCTCAGGACTACAGCAACTGCAAGGGCATGAAGAAGAACGGAGACCCCTGCTCTCAGATCGTCAACATGTTCGAGTGCCAGTACTGTCAGTATCACGTCAAGGCCCAGTATAAGCAGATGAGCTCCAAGAGGTCCGAGCTGCAGTCGGCTTTTTCTGGAAAAGCTCCGAACAGGTTGAAGGGGAAGGGCGGCAGCCTGAAGGAGCGTTTGTGTCAGGACGGCTTCCACTACGGCGGTGTGTCCTCGGCCGCCTGCGCCGCCTCACTAACGGCGTCCAAACCGAACAAACCCGGCCAGACGACTCTGAGCAAGCTGTTTGTGAAAGGCTCGGCTCAGCTCGCGGATCAGGCCAAGAGGCTGGccCTGAAGTCCGGTGAAGTTTCAGGTTGTACGAATGAATTTAAGAGCCTGCTGTCGGCGCCGACCCCCGGAGCTCTGCAGCTGAAGAAGCACTTGGCGCAGGGCAGCCAATCAGTCTCCAAAGATGCAGGGGGAGCTCCAGTTCAGTCCATCTCAGCCTCAGACCTGCTGAAGCAGCAGAAACAGAAGCAGCGGGAGTTTCTGCAGAACCGGCGGCGGCGGGCAGACGAGATCCAGAAGAGGGTGCTGCATAGCCCAGCGGGGCCCAGACCCGGGTCTACGTCCTCACTGGGCCGAGATGGTCTGATGTCCCCGAAAGCAGCTTCTGAGGTCCCCAAGGCCACCCAAAGCCCCGCAGCTCCCCGCGCTCCCACCCTGGGCCGAGGCTTCTCTGAGGGGGAGGACATCCTCTTCTTTGAGAACAGCCCGCCTCCGGTGCCCGCCCCCAGCGCTCTCAGCCTATCAGCCGCCAAGCTGGCTGCTCTGAAGAAGCTGAGAAACAAAGGGGCGGGGCTTGAAAAGGAAGACCCCAACGCtgtgaagaggaagaggagtaacGGCAATGAGATCAGCACCCGAGTGGAGAAGAATCTGACCTCACCCAATGGTGAATCGTCCAGTAATGAGGAAGAGGAGCCGGCCCTGAAGAAGAAGCGAGAGCAGCTCCTCTACATCCAGTCGGAGGAATTTCAAAAGATCCTCAACGCCAAATCTCGCCACGGAGCTGCACTACAGGCGGCGGAGTACCAGCTGCAGGAGAAGTACTTTGATCCACTGGTGAAGAAGGAGCAGATGGAGGAGAAGATGAAGGGCATCAGAGAGATGAAGTGTCGTGCTGTATCCTGTAAAAAGTGCGGTTACACCTACTTCAAGCCGGCAGATCGTTGTGTGGAGGAGAACCATAACCTGCGGTGGCACGATGCCCTGAAACGCTTCTTCAAATGCCCCTGTGGACAGAGAGCCATCGCTCTGGACAGACTGCCAAACAAACACTGCAGTAACTGTGGTCTGTTTAAATGGGAGCGTGATGGGATGCTGAAGgaGAAAAAGGGACCAAAGATCGCCGGAGAGCTTCTGCAGCCTCGAGGAGAGGAGCACGGCAAGTTCCTCAACAGCACGAAGTGAATGCACcaggattcatttttttttttgtttataattTTTGTAATTTAAGTGTCTTTGTAgcatttttacatttgtatgAATAATGTTTTTAAAGTCTGATGTTGTGTAATTGATTATGGAGATTTGAAAGTCTTTGATTATATTGGATATGGAAAGAAGATGATTAAAGCAATAATTTGCAACATTTTA
>XM_039791001.1
CCCTCGCTCTCAATGCTCGCTCTCTATGCTCGCTCCGAGTGCAGGTTGTAAAGACTAGCTACAAGATTAATATCTCGATTTTTATCAAATATAACCCATGACTTGTACATAACTACGCGCAGTGCTAATTATTGGGGAACAAACAACACATTGACAGGTTGGAAGTAGTTGAAAAATCCATCAAATTTGTATTAGAGCTAGCAAAGGACACAAAGCTGTAACATTACCGTCAAGCTCTAGAACCAGAGGTCACCAGTTCATCTAAAATCAGTACCAACATTCACATCTCTAAAATGGAAAGTGAGGATGATCTGGACATTCTGACGGCGCTGCTGGCTGAGAGCGAGGGAGTCGGAGAAGAGCAGGGCGGTCAGGAGCAGGCAGACGACTTGGACGGCCTGTTTGATGCCGACAATGACGAGGAAGAAGAGTACAAAGAGGGCGTCGAGGAGGAAGGGCGAGATGTGTCGGATCTCTTTGGAGATGTGGAAGACattgaaaatgaagagaaagacactaaaagaaaagaaagtggtGGAGAAGCCTGCGAGAGCCTGGACAGGTCAAAGGAGGATTTACAAGATGAGCTGAGGCGCATGCAGGAGCAAATGCAGCggttgcagcagcagctggaagCAAGCCAGAAGGTTTCCACCTCATCTTCCCCTCCGGTCACGGCTGCAGGGAGCACGGCTCGTCCAAAACCAGTCACTCCCAAACCGACACGCACTCCACAGCCGACCGCCAAACTGGCCCAGGCCAAACCCACCTCTACCACACCGAAGACCAAGGCACAATCAGCAACATCTTCACCCGCTccagtcagaggaggagatCTGAAGCTCCAGGAGTCCTCTGACTTTTTTGATCAGCTGAACAATGCTGACTCCTTCAAACGTAAACCCCGGCTAGCTCATCATCCCAAACCAAGCACGTCGCCAGAAGACAGAGGGCCGCTGGTGGAGATAAAGCTTGGCAGCTCCTTCCAGCCAGTAGAGAGCACCAGCCAAGCTTTCAATCCTGTGCGTTCACCTCCAGCCTCTCAGAGCAAACCTGCATTGGCTGCATCAGCAGGACAGCCCAaaccttctcctcttcctccccttccTAAAGATGTGGGGGTTGAGAAATACTCAGGACTGCGGCTCAGAAAACCGCGCGTTTCCTCCAGCGAGATGGACCGCAAGATGGCCGACCGCCGTCTAATCCGTCTGTCCCAGGTACCGGAGCGCGCGGCTCGAGAGAAGCTGGAGGATAGCGATTGGGTGACTTTCGCTGTGCTGGTCAACAAAGTCACTCAacaaagcagcagcagtGGCAAAACCTTCAGCATCTGGAAACTGAACGACCTCCATAACCTGGaagtgtttgtgtctctgctcCTGTTCGGCGAAGTTCACAAAGAGCACTGGAAAACGGAGACGGGCACCGTCATCGGACTCCTCAACCCAAACCTCATGAAGCAGAAAGAAGGATATGACGGGGTGAGCCTGACGGTGGACAACCCCCAGAAGGTGTTGCTGATGGGCGAGGCTCAGGACTACAGCAACTGCAAGGGCATGAAGAAGAACGGAGACCCCTGCTCTCAGATCGTCAACATGTTCGAGTGCCAGTACTGTCAGTATCACGTCAAGGCCCAGTATAAGCAGATGAGCTCCAAGAGGTCCGAGCTGCAGTCGGCTTTTTCTGGAAAAGCTCCGAACAGGTTGAAGGGGAAGGGCGGCAGCCTGAAGGAGCGTTTGTGTCAGGACGGCTTCCACTACGGCGGTGTGTCCTCGGCCGCCTGCGCCGCCTCACTAACGGCGTCCAAACCGAACAAACCCGGCCAGACGACTCTGAGCAAGCTGTTTGTGAAAGGCTCGGCTCAGCTCGCGGATCAGGCCAAGAGGCTGGccCTGAAGTCCGGTGAAGTTTCAGGTTGTACGAATGAATTTAAGAGCCTGCTGTCGGCGCCGACCCCCGGAGCTCTGCAGCTGAAGAAGCACTTGGCGCAGGGCAGCCAATCAGTCTCCAAAGATGCAGGGGGAGCTCCAGTTCAGTCCATCTCAGCCTCAGACCTGCTGAAGCAGCAGAAACAGAAGCAGCGGGAGTTTCTGCAGAACCGGCGGCGGCGGGCAGACGAGATCCAGAAGAGGGTGCTGCATAGCCCAGCGGGGCCCAGACCCGGGTCTACGTCCTCACTGGGCCGAGATGGTCTGATGTCCCCGAAAGCAGCTTCTGAGGTCCCCAAGGCCACCCAAAGCCCCGCAGCTCCCCGCGCTCCCACCCTGGGCCGAGGCTTCTCTGAGGGGGAGGACATCCTCTTCTTTGAGAACAGCCCGCCTCCGGTGCCCGCCCCCAGCGCTCTCAGCCTATCAGCCGCCAAGCTGGCTGCTCTGAAGAAGCTGAGAAACAAAGGGGCGGGGCTTGAAAAGGAAGACCCCAACGCtgtgaagaggaagaggagtaacGGCAATGAGATCAGCACCCGAGTGGAGAAGAATCTGACCTCACCCAATGGTGAATCGTCCAGTAATGAGGAAGAGGAGCCGGCCCTGAAGAAGAAGCGAGAGCAGCTCCTCTACATCCAGTCGGAGGAATTTCAAAAGATCCTCAACGCCAAATCTCGCCACGGAGCTGCACTACAGGCGGCGGAGTACCAGCTGCAGGAGAAGTACTTTGATCCACTGGTGAAGAAGGAGCAGATGGAGGAGAAGATGAAGGGCATCAGAGAGATGAAGTGTCGTGCTGTATCCTGTAAAAAGTGCGGTTACACCTACTTCAAGCCGGCAGATCGTTGTGTGGAGGAGAACCATAACCTGCGGTGGCACGATGCCCTGAAACGCTTCTTCAAATGCCCCTGTGGACAGAGAGCCATCGCTCTGGACAGACTGCCAAACAAACACTGCAGTAACTGTGGTCTGTTTAAATGGGAGCGTGATGGGATGCTGAAGgaGAAAAAGGGACCAAAGATCGCCGGAGAGCTTCTGCAGCCTCGAGGAGAGGAGCACGGCAAGTTCCTCAACAGCACGAAGTGAATGCACcaggattcatttttttttttgtttataattTTTGTAATTTAAGTGTCTTTGTAgcatttttacatttgtatgAATAATGTTTTTAAAGTCTGATGTTGTGTAATTGATTATGGAGATTTGAAAGTCTTTGATTATATTGGATATGGAAAGAAGATGATTAAAGCAATAATTTGCAACATTTTA

Function

symbol description
mcm10 Predicted to enable DNA replication origin binding activity and single-stranded DNA binding activity. Predicted to be involved in DNA replication initiation. Predicted to act upstream of or within DNA replication and cellular response to DNA damage stimulus. Predicted to be located in nucleus. Predicted to be part of replication fork protection complex. Human ortholog(s) of this gene implicated in primary immunodeficiency disease. Orthologous to human MCM10 (minichromosome maintenance 10 replication initiation factor).

NR:

description
protein MCM10 homolog

GO:

id name namespace
GO:0006260 DNA replication biological_process
GO:0005634 nucleus cellular_component

KEGG:

id description
K10736 MCM10; minichromosome maintenance protein 10

RNA

RNA id representative length rna type GC content exon number start site end site
XM_039791000.1 True 3209 mRNA 0.53 18 20394066 20409676
XM_039791001.1 False 3206 mRNA 0.53 18 20394066 20409676

Neighbor

gene id symbol gene type direction distance location
hcfc2 hcfc2 coding downstream 107479 20272526 ~ 20286587 (-)
cep83 cep83 coding downstream 121922 20260025 ~ 20272144 (-)
LOC120553419 timp3,LOC103152565 coding downstream 393544 19983479 ~ 20000522 (-)
LOC120553212 fam19a2,LOC103364248 coding downstream 587311 19733066 ~ 19806755 (-)
lrig3 lrig3 coding downstream 825009 19546626 ~ 19569057 (-)
optn optn coding upstream 519 20410195 ~ 20430496 (-)
camk1da camk1d coding upstream 45999 20455675 ~ 20530744 (-)
LOC120553073 NA coding upstream 127380 20537056 ~ 20544945 (-)
cdc123 cdc123 coding upstream 140358 20550034 ~ 20564985 (-)
il15ra NA coding upstream 210869 20620545 ~ 20640722 (-)
G229071 NA non-coding downstream 2558 20382465 ~ 20391508 (-)
G229062 NA non-coding downstream 36503 20355636 ~ 20357563 (-)
G228946 LOC103364246,LOC103152567,LOC106913527,LOC103459763,LOC106945279 non-coding downstream 488123 19852964 ~ 19905943 (-)
G228947 LOC103152567,LOC106913527,LOC106945279,LOC106922717,LOC102300237 non-coding downstream 511987 19877097 ~ 19882079 (-)
G228949 NA non-coding downstream 535203 19858103 ~ 19858863 (-)
G229076 ccdc3,LOC102778083 non-coding upstream 24479 20434155 ~ 20437536 (-)
G229079 NA non-coding upstream 32644 20442320 ~ 20450128 (-)
G229095 NA non-coding upstream 125609 20535285 ~ 20535597 (-)
G229096 NA non-coding upstream 126897 20536573 ~ 20536801 (-)
G229098 NA non-coding upstream 131512 20541188 ~ 20542936 (-)
cdk17 LOC104930593 other downstream 39439 20301092 ~ 20354627 (-)
rerg rerg other downstream 271673 20066895 ~ 20122393 (-)
etv6 etv6 other downstream 554716 19806814 ~ 19839350 (-)
G228934 fam19a2,LOC103364248 other downstream 586968 19733102 ~ 19807098 (-)
sox5 sox5 other downstream 1123730 19028609 ~ 19270336 (-)
G229199 NA other upstream 547981 20957657 ~ 20958220 (-)
ptprz1b NA other upstream 654015 21063691 ~ 21145533 (-)
slc38a2 slc38a2 other upstream 1051400 21461076 ~ 21474602 (-)
LOC120553090 NA other upstream 1361412 21771088 ~ 21811097 (-)
G229716 NA other upstream 2695084 23104760 ~ 23239573 (-)

Expression


Co-expression Network