pax4


Basic Information

Item Value
gene id pax4
gene name NA
gene type coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053134.1
NCBI id CM020931.1
chromosome length 29109922
location 11453460 ~ 11456592 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>XM_039791007.1
ATGTGCGGAACAAACGATCAGCCAAATAAAGGTTGTGGAAGTGTCAACCAGCTAGGAGGGATGTTTCTCAACGGCAGACCTCTCCCGGAATCCAAGAGGAGGAAAATGATTGAACTGGCCTCGGAGGGAGTCCGTCCGAGCCAGATCTCCAGGATACTTCGGGTGTCCAACGGGTGCGTCAGTAAGATCCTGAGCCGCTACCGCCGCACTGGACTCCTGGAGCCCAAGACCATTGGAGGGAGCCGACCTCGGCTTCTCACCCCCGGTGTCATCACCTCGATCATCCAGtgcaaaagggaaaatccaACCATTTTTGCTTGGGAAATTCGAAAACGGCTTGCAACAGCACGAATATGCAAAGCCTCCAAAATTCCCAGCGTGTCGTCTATAAATCGGATTGTAAGAAAGATCCATTTGGACCACGGAGCGATGTGCATGGAGATCAATGCGCACATCAGGGCTGAGCAGGatTCGGATTCCCTGATCGAAGAAGAAGTGATTGAGAGAAAGATGTCTGAGACAGTACGCAGCAATGACCAGAAGCCTAAAGCTGTCCAGCAGCGGAACCGCACCACCTTCACCCCGGAGCAGAGCACAGCACTCGAGCAAGAGTTCTCTCACAGCCAGTATGCAGATATGTACACGAGAGAGAAACTGTCCGCTGAGATCCAACTTCCCGAGGACACCATCAAGGTCTGGTTTTCAAACAGACGGGCTAAATGGAGGAGGGAAGCCAAACACAGGAGCAGTACAaagaACCTTCAACAACAAAGAGATTTCGTTCCTGTGAATCCAACAATACCACATGGCTTCACATCTCAAcagGCAACAGGAGTGTCAAGGGTCTACTGTGAAAATTCAGAGGCCCCCCCTACCTACAACACTGTTGCTAGGACGTTGCAAAATGGCTACTTTTTCCCAGCAGAAAGAGGTTTGACAAATTCTGGACATCTGACATCCATCTCAGTCCCACCCTCACTCATCCATCAGTCTAATAACATGATGGCCCAGACCATGGCAGACAAGACTCCACTGGATCTCCACAGAGATAATAGATTCACTTTCCCATTGGTTCACCATCACACAGACGCAAGGACATCCCTCCCTTTGGCAACTGAGACAGTAAGAGCAGACCACCCTGTGGCACAGTGCTGGAACCAGCAGGGGATTTCTTTTACATGGAGCCCGTTTCAAACAGATGAGAGGTTGTTATTCGTACAGCAGCCCTGGGATGTGAACCCACATGGCTACCTGGACTAA

Function

NR:

description
PREDICTED: LOW QUALITY PROTEIN: paired box protein Pax-4-like

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_039791007.1 True 1260 mRNA 0.51 10 11453460 11456592

Neighbor

gene id symbol gene type direction distance location
lrrc4.1 LOC104918788,LOC103365345,LOC100694050 coding upstream 85505 11362763 ~ 11367955 (+)
LOC120553009 NA coding upstream 429702 11019226 ~ 11023758 (+)
si:dkeyp-38g8.5 NA coding upstream 779409 10672048 ~ 10674051 (+)
scyl2 NA coding upstream 794449 10648321 ~ 10659011 (+)
depdc4 depdc4 coding upstream 809689 10638588 ~ 10643771 (+)
LOC120553760 NA coding downstream 355435 11812027 ~ 11822653 (+)
LOC120553761 NA coding downstream 358521 11815113 ~ 11822653 (+)
LOC120553244 LOC103365396,LOC108235086,LOC101484317,LOC107085982 coding downstream 369717 11826309 ~ 11836976 (+)
mettl25 mettl25 coding downstream 396088 11852680 ~ 11864699 (+)
tmtc2a tmtc2 coding downstream 415955 11872547 ~ 11929466 (+)
G227221 NA non-coding upstream 265678 11186939 ~ 11187782 (+)
LOC120553063 NA non-coding upstream 360786 11092190 ~ 11092674 (+)
G227217 NA non-coding upstream 399265 11043412 ~ 11054195 (+)
G227204 NA non-coding upstream 442145 11011114 ~ 11011315 (+)
LOC120553015 NA non-coding upstream 485212 10967639 ~ 10968248 (+)
G227251 NA non-coding downstream 3521 11460113 ~ 11460500 (+)
G227267 NA non-coding downstream 167643 11624235 ~ 11627943 (+)
G227338 iqsec3 non-coding downstream 533508 11990100 ~ 11992952 (+)
G227363 NA non-coding downstream 786942 12243534 ~ 12243755 (+)
G227499 NA non-coding downstream 1531121 12987713 ~ 13043018 (+)
G227216 NA other upstream 340555 11102836 ~ 11112905 (+)
impdh1b LOC104968094,LOC103355171,LOC102293685,LOC102194436,LOC104918784 other upstream 467259 10948285 ~ 10986201 (+)
G227141 dcn,LOC103382665 other upstream 715957 10732069 ~ 10737503 (+)
G227121 kera other upstream 753742 10697254 ~ 10699718 (+)
ndufb2 ndufb2,LOC102790702 other upstream 2212111 9237226 ~ 9241349 (+)
G227278 LOC104928793 other downstream 232577 11689169 ~ 11757317 (+)
st8sia1 st8sia1 other downstream 650360 12106952 ~ 12126545 (+)
plxna4 plxna4 other downstream 1202676 12659268 ~ 12910189 (+)
nrf1 nrf1,LOC103372774 other downstream 1548747 13005339 ~ 13022947 (+)
yeats4 yeats4 other downstream 2017957 13474549 ~ 13479115 (+)

Expression


Co-expression Network