LOC120552999


Basic Information

Item Value
gene id LOC120552999
gene name NA
gene type coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053134.1
NCBI id CM020931.1
chromosome length 29109922
location 28016843 ~ 28023618 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>XM_039791037.1
TTTATATTAGAATGAAACTGACAGATAATTGTTAACGCTTTAAGTTGTGTTCTATTGAAAGGATCTAGCTACAGGCTAACCAGAGCTCGACTCGGCGGAAGCATAAATATTGCAGCGCGGAAGGATACATGAGTGAATCAACAGTGATCCAACTGTCAGTCTCTGTCAGTATCGATCAAAGTCGGGAGGATGGCGCTTGGGCATTTATCCACGGAGGATTTAATCACAGAGTTACTTCGTTTTGGAGTAGAGGTCACTGAAGAGGAGAGAAGTAAATTCAAAGATAATGAAGTTGACGGAGAAGCAGTGGACTATGGATTGACTGAGAGGATGGTTTCATACCTCTTTGAAGGATCATTTAAGAAGCAACCCAAATTCAACCGATTTGTTCAGCAGTGGAAAGAAACCGTGACACTAACCCTTGAGCCTGTCCCGGTACATTCAGAGAAGGCTACAGCGGAATCAAGTCATGCCATCCCATCATCAGCCTTCCCAGCAGTTTTCATCATTCCTAAATTTCCCAGAGATGTTCAGACAAAGTTGGACCAAAAACCGCCATGCAAAATTGAGAGATCCGATCACAACAAAATCATAAGAACATTGTATGAAACCATGGCCCTGATCAAAATGTTTCCGACCAATGATGACTATGTGAAAGTGTGCAAGGCCCTGATTTTGAAGTACCCTTTCTTAAAGGACAAAGAAGGCAATGGTTATCATACCTGGCACATGTCTCTCAAACGTAAGTTCAAATATGAGCGGGTGCCACTGATAGATGATGAGGAGGTGAGAAGAATGAAACTGAAATTTGGTCATCACAAAAAGCCTTTGCAACATgaagaaaacacaagcaaacgAGCCAAGACATCAAAGGAGGTGGATATTATTGGGGAGGATGATACCTCAGTAGCGAGCCATGTGAAAGTCCTGCAGGACCAGTACCGGAAGACACAGCCAGATGCCCGAATGGTGGAGGAACGGATGATGAGGACATTCGCTTGGAGAAGGCGATAGATCGCCAATGGGATGACTGTCGAAGAAGCCATTAACAAATATCCATTCCTTAAAAGTCCATGCGGGCTATTTCAGGAAATGGGCCGGCTTCATGATGAAATGAATATCTGCCGAAGATTTGAAGATGGCTTTAAGATCCTAGTACCCACAGTGCTTAGATTGACTCAAAGGAAATCTCCCCTTGCAGATCTGGCTTTGGAGGAAAGAGAGGCTGCCCTCACCGAAGATGTCCCTGGGATTGATTTCAGAGCTGCAATCCTGCTGTTGCCGATCCTGTTCAGGGAGAAAAATGACATTCTCGTCACACTTGGGgagGATCAGCCACCATCGCCATATCCTACTGTACAACTCGACGCTGTCGCTGACTGGAGGACTGTGCTCACTCGAAGGGTCCCTGCAGTGGTCAAACTGGATGGGCAGTCAGTCTGCAGGGCGCTTGGTTTGGAGGAAGGTGTTATTGCTACTTTTTGTGCTTACTTCATCTACAACGTGGTATATCCATCTCGCCTGAAGAACACCCTGATTTTCATTCAGCGATATGTTCTAAAAACGTCTGAGGTTGGTGACAAGCCTCTACCTGTTAGTGTGACCAGGGTAATCAACATTTTAGCTTGATCAATAACAGCATTGCGTACACCATTCAGCTGTCCTAAATGCTCTCGAAGAGCCTTCACATTGGTGAAGTTAATCCAGCACATCGGACTTGTTCATGCACATGAGCCACATTTTACCATAACGTGTGACCTTAACAACTGTCaatcaacattttctaaataTGAGTCCTTCCGACGACATATTTACAGGAAGCATAAAGACATTATAGCCAGACGAGCCACTGCTCATGATATACAGGAAACAGTAGTGGGCGAGGAGGAGCAGGGGCCCAGTGATCCTGAACCTCCGGAGATGAATGAACTGTTCAGTGCAGTTTAGAGAGAATCTTTTTGGGTTTATTCTGAAATCGAGGGAATAAAACCACCTTCCTCAGACTGTTCAACAAGAAATACTGGATGACGTAAATTTTTTGTTTGACTTCTTTAAAGCAAACTATTATGCATTTCTAAAATATCATCTTGAAAAAATGGCTTCAATGTGGAATCTTGTCCTGAACTTTATGAAGTTCTGCAGCgctctgactttttttcagagGCATCAAAACTTGTTAGGTCTCCGCATATGTTGAAAAACTACTGCAAATCCAACCTTGAAATGACTGAACCTGTAGACTACGCACTGAGAGACCCAAGTGGTCGTAAAGTTGGAAGCTACTCTTATGTAGCCATTTGTGATGTACTTCAGAAATACTGCTCTCGTGAAGATGTTTGGGATTCTATGCAGAGAGAGCGAAACTGTGAAAGAGATGTACATGTTCTAACTGATTATAGAGATGGATTTTATTTCAGGGACCACAAGGTATTTGCAGATAATCCAGATGCTCTAAGGTTACACCTATATGAGGATGAATTTGAGGTGTGTAATCCACTGGGTTCTAAACGTAACAAGCACAAACTTTGTGCATTTTACTACACTGTTGGAAACGTAGGTTCAAAGTACTGCTCACAGCTAAAACATATCCATCTAGCTTTGCTTGTCCGTTACGTTCATGTCAAAAAGTTTGGTCTAGATGTAATTTTGAAACCATTACTGGATGACCTTAAGAAACTGTCATCAGAGGGACTAACTATCATTGTTAATGGCATGGAGAAGCATGTTTTTGGAGCTGTAGCTGCAATATTGGGAGACAATCTGTCATCTCACATGATAGGTGGATTTACCATGTCTTTTGGTGCTGGTCGAATCTGTAGATACTGAATGGCTACTCACTCTGAGATGAGAAAGAACTTCAGTGAATCAGATTTTGTTTTAAGAAATGTTGATGTACACAGATACCATTTAGAATGTGTAAAACAAAATCCAGCAAACAGAGGAATGTATGGAGTTCGTGGTGGATGTGTATTTGACCAGTTAGATTACTTTGACGTCACAACATCGCTTCCTCCAGATGTCATGCATGATTTCTTGGAGGGTGTAGCACCGTTGGTATTGAGGCTTGTTGTATGTAAAGCTCATCAAGAAAAACATAACCATACAAGAACTAAATGAGGAACTAAGAAAGATTTCTATTGGACAAAATGATAGGACAAATAAGCCTGTACCTTTCTCAGAAAATATTTTACATGGATCCAGTGTTGTTGGATCTGCTTCACAGAAGTGGTGTTTATTCCGCCTACTTCCCTTCTTGATGGCACACAGGGTACCTGAAGGCTGCAGTTACTGGCAGATCTATTTATTGTGTCGTGAAATTGCAGACATTGTAATGGCACCGGTTGTTAAAAAAgagtctcttcctcttcttgaCCAATTAATTTCTGAGTTTTTGTGTGGTATGGAAAAAGAGTTTGGAAATGTGATAACTCCGAAATGTCATTACTTGATCCATTATTCTCATCTAATGTCCTACGGTCCTTTACGGTCTTTGTGGTGCATGAGATTTGAAGGGAAACATCAGTATTTCAAACAGGTAGCTAGTTCCTCAAGGAACTTTGTTAATGTTACATCAACTTTAAGCAGCCGCCATCAGTTTAGACAGTGTTGGGAATTTTCCTCAACTAATATGTTTGGAGAGTATGAGAGGGTTATGGGACGCAGTGTTAACACACTGTTACAGTCTCTTCCTTCAGCTCTTAGGCATTCCATAACTGTTAGTGAGCGGTACAAACATGTCAATTTTCAGGACATTACACTCAACCGAGTAACAGAGGTTGTGATTAACAGTGTTAAATACTTTGTGGGAGATGTCTTTGTTGTGGGTCATTTGCACTGTGAAAAaatacctttttgttttttcaggtCAAATATATtctaaacatacacacagattgGGCGTTATGTGGAAAACTATTAATTTCTCTTTCTGTCATGACTATTACACCTACTTGGTGAAATATGAACAGGACTGGACTGTACTTGACCCTTTCGAGGTGATGGATTTTCATGCTTTGGATACATATTGTGTCGATGATAAACTGTTAGTATGCGGCATTTATGTTAAGCTGTGTTGGAAGGGTTGTAGAGCGTTGTGGATGAGCTCAAAGCTTGTTTTTTAATCCAGAACACCTCAAGCGACATGTAGTTTATCCTTTAAGTTACTcatgatttattgtttttataatgtATTTTACTTTGGTGTGGTGTGCTAAAGTGTTTTGCTTGGTGTTTGATAAAATACTATTATGTTTTTCTGCACTATAGTGTTGTTCTTATTACAGttc

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_039791037.1 True 4286 mRNA 0.41 9 28016843 28023618

Neighbor

gene id symbol gene type direction distance location
LOC120553234 LOC104948514,LOC103363512 coding upstream 57445 27849737 ~ 27959398 (+)
kiss2 NA coding upstream 320126 27695624 ~ 27696717 (+)
spx spx coding upstream 365761 27648003 ~ 27651082 (+)
golt1ba golt1b,LOC101473753,LOC106532178,LOC103459552,LOC106907182,LOC105929813,LOC102297447 coding upstream 371964 27637088 ~ 27644879 (+)
LOC120553763 NA coding upstream 744628 27253416 ~ 27272215 (+)
LOC120553593 LOC104927640,LOC103363517,LOC102305443 coding downstream 126114 28149732 ~ 28293546 (+)
LOC120553840 NA coding downstream 556869 28580487 ~ 28580602 (+)
LOC120553854 NA coding downstream 788234 28811852 ~ 28811952 (+)
LOC120553851 NA coding downstream 789707 28813325 ~ 28813435 (+)
LOC120553852 NA coding downstream 796327 28819945 ~ 28820054 (+)
G230949 NA non-coding upstream 19687 27996895 ~ 27997156 (+)
G230948 NA non-coding upstream 29382 27987139 ~ 27987461 (+)
G230902 NA non-coding upstream 39972 27976454 ~ 27976871 (+)
G230908 NA non-coding upstream 40634 27974851 ~ 27976209 (+)
G230901 NA non-coding upstream 42258 27973301 ~ 27974585 (+)
G230983 NA non-coding downstream 63877 28087495 ~ 28088216 (+)
G230985 NA non-coding downstream 64743 28088361 ~ 28088896 (+)
G230987 NA non-coding downstream 80058 28103676 ~ 28103919 (+)
G230989 NA non-coding downstream 81423 28105041 ~ 28105247 (+)
G230991 NA non-coding downstream 91569 28115187 ~ 28115436 (+)
G230904 NA other upstream 69370 27941321 ~ 27947473 (+)
G230842 NA other upstream 413141 27603005 ~ 27603702 (+)
LOC120553194 NA other upstream 944291 27069077 ~ 27072552 (+)
LOC120553759 NA other upstream 1044990 26693356 ~ 26971853 (+)
mrps33 mrps33,LOC106591474 other upstream 1635734 26372714 ~ 26381109 (+)
G230975 NA other downstream 34113 28057731 ~ 28058218 (+)
trnat-ugu_41 NA other downstream 447188 28470806 ~ 28470878 (+)
trnak-uuu_24 NA other downstream 447488 28471106 ~ 28471178 (+)
LOC120553833 NA other downstream 477616 28501234 ~ 28501419 (+)
LOC120553776 NA other downstream 588937 28612555 ~ 28630012 (+)

Expression


Co-expression Network