utp20 (utp20)



Basic Information


Item Value
gene id utp20
gene name utp20
gene type coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information


Item Value
chromosome id NC_053134.1
NCBI id CM020931.1
chromosome length 29109922
location 19364203 ~ 19396806 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence


>XM_039791043.1
ccacaatgcattgtTCAGCATGGCTGCTCCCTGTTGTCGGCGTGTGTGTAAACAGTCGTAGCCAAAAGAAGAAACCAATTGTAGTTTTAATGAGTCATTTAAATCTCACGACCACCTTTGGAATACAATTAATTAACGTCACGTATCAAGGAACAAGGCAAagatgaagattaaatccaagTCTTCGTATCACAAATCTGAGAACACCTACAGGTTTCTCACTTTTGCTGAAAGACTTGCCAATGTTAACATTGACGTCATCCATCGCATTGACAGGACTGGGTCTTATGCAGAGGAAGTAGAAACATACTTTTCTGAAGGGCTGACAAAATGGAGAGACCTCAACTTGACCGAGCATTTCACTACATTTTTGAAAGAGGTTTCAAACCAGAGCCAGTCATTCAACATGCTGGTTTTCCATCAGAAGTCGATAGTGGAGAGTCTGAAAACGCACCTGGCTGTCAAGAACAGTCTGGCCTACCAGCCACTGCTGGATCTGGTGGTGCAGCTGGCCAGAGACCTGCAGACTGACTTCTACCCCCACTTCCCCGACTTCTTCGTTCTGATCACCTCGCTGCTGGACACCAAGGACACAGAGGTCCTGGAGTGGGCTTTCACCTGTCTCTCCTACCTCTACAAGTACCTGTGGAGGCTCATGGTGAAGGACATGACCAACATCTACAGTTTATACAGCACACTGTTGGAGCACAAGAAAGAGCACATCCGCAAGTTTGCAGCAGAGAGCTTCTCTTTTCTGATGAGAaagGTTCCAGATCTTGATGCCCTGCTGAGTTATGTGTTCTCAGACCTGCAGCAGCACCCCGACAAGGCGGAGGGAGCAGGTCAACTGCTGTTCGAAATGTGCAAAGGAGTCCGAAACATGTTTCACTCCTGCGCTGCAAATGCTCTCCCTGTAGCTTTGCGTAAGCTCGGACCCTCGACCAACCCAGGAGCCTCTCTGCCGTGGGACACTGTTAGGGACGCTTTGGATCACATGGCCCAGgctgcagccaatcacattGACAGAGAACACTTCCTGGTTTTGTGGGAGTCCTTACAGGTCAGCGTGGTGGAGGTTCTGGGTGTTATGGAGGTGAAAGGAAAAGAGGCAGCCGAGCAGCTGGAGAGGCTGCTGTTCATTCTCCACACCCTGGTGTCCCACAAGGACGGAGTAAAGATCACCAAGCCGGAGGCTGTCTGCCAGACGGTGTTGCGGCTGATTCAGAGCTCGTCTCTGTCGGCTTCTTGTTCCCGTCTGCTCCTCCAGATCGCCTCCTCTCTGCTCCTCGGGGAGAACGTCACCCTGCCCAAAGCACTCATCCAGGAGACGGTCCAAAAGGTGTTTGGCAGCACAATGGGGCAAGATGTGATACTGGAGTTCACCAAGGAGATGTTCACCATGAAACAGTTTGAACAGCTCTTCCTCCCCAGCCTGTTGCGCTTCACCGCTGGGTTGTTCGGCTGCAGCGATCCCCTGTCTCGCCACTGTGGCCTGGATACACTGGTCAGTCTGATCCTCGCCAAAGCCCCGCCCCCCACAGACGGCTCCATGGCCTTTGAAACCTATCCCCTGCTCTTCACCGGCCAGACCACAGGCAGAGTGTTCAGCAGTAAGGAGGCAGGTGAGGCCAGCAGTGCAACATCAGAGCAGCCTGCGGTGCCAGAGCTGGTGCTTTCGCTGATCCAATTTCCTGAGGAGCAGGACCAATCCATCTCGGACCTGTCGCTGCCTTGGGCCGCCCTGGTGCTTTTGCCACAcctcaggcCCATTGCTCCAGCTAGCGTTGTTCCCGCTGTGACTGCTTACTTAAACCACCTCCTGTGTGAGATTGAGACAGAGAAACTGGGAAAAGCTGGTCTGTTTGTAGCCAGACAGGCCCTGAGCTGCCTCCTCACTCTGGACGGCTCTGCCCAGCTTCTCTCACTGGTCACTGTGGACAAGATCAACTCAATACTACGGAGGTTTCCCACTGACCTGTCGGCCCTGCTGCTAGGAGACCTGTACTACACCCGCCTGTCACTCAGCGGCGTTTCAGAGCACCTATCCCACAGTGCACTGCTGGAGCTCCACCAGATACTGCACGCCAACCTCTCCTCCAACATCTCCAAGaTCCGCCTGCTGACTCTAAGGATTCTCTCTCAGTTTGAGGCAGAGCTCCCTCCACAGACTGAGGGTGAGGAGAATGTGGAGGTGCAGCCGGTGTTTGCAGTTTGCCTGCAGGCGGAGCTGGTGCCGGCTTCGGTGCAGGACTACAGAGACAAGCTGCTTCACCTCCGGAAGCTGAGACACGACCTGGTGCAGCGCAGTCTGCCTCAGGGGCCGCCCGGCACCTTCCAGCAGGTGCCCCTGCGTTACCTCATCGCAATGCTGTTTGTCAACTTCAGGCCACTGTGGGACGCAGTCATTGAACTTCTCGTGAGCCATGCCAGAGGGATGGACAACAAGGACTTCTGGAGGGTCTACCATGAACAACTGGAGAAGGTGGCGGGGCTGGCTGAAAAAGAATTGCAGGAGAGCGCCgaggatgatgaagaggaagagtgTGGTCTTCAGGGCGAGCCGGGCTGCGACGTCATTGAAAGCGGAGACATGGGGGTGCTGTTCCTAGAGCAGCTGAAGTTGACATCCAACCCCAACGAGAGGACGGACTTCCCTAACTTCCGCAGCCTGCTGTGGCGCTGCATGACGGAGTTTCCTGACAGAGTGGAGCCACGTAGCCGGGAGCTGAGCCCGCTGCTGCTCAGGTTCATCAGgAATGAGTTTTACCCCGCCGACCTGCTGGTGGCACCCACTCAGGACTTGAGGAAGGTGAGTGACGCTGCCCTAGAGGAGTCTGGGATggctgtggaggaagaggaggaagaggagcaggaggTGCAGGAGGGAGGCAGACAACAGAGGAAGGCTCTTCCAAGGAGAGCTGCTGCAAAacAGCTGATTGTCCATCTAAAGGTGTTCGCCAAATTCACCAACCCTCGCTCCCTCTACATGGAGAGCAGCCTCAGCGAGCTCTATAACCAGtTGCTCTGCCATCAGGACCAGCAGATCCAGCGAGTGGCACTGGAATGTGTTCTCACATACAAAGACTCCAACATAGTGCCATACAAggaGAATCTCGAGAGGCTACTGGACGACAAACACTTCAAAGAGGAGATTGTTCATTTCAACATTACTGAGGAAACGGGAGTGGTTAATGCTTCACACAGAGCCAAACTCATCCCACTGctcatgagGATCCTGTTTGGCCGTCTGCGCAGTAAAGCAGGGAGTAAGTTTCAGGGGAAGGCGAGCGCCGCCACCCGGTCCTCCATTATCCTGCGTTTCCTGGCAGGTTGCCAAGCTGAGGAGCTGGGAATATTCATCAACCTGCTGCTGGAGCCCGTCTGCCATCACAGCCAAGGTTCGTGCGTGGCGGCAGTGGAGAAAGCCGTAGCGGAGACGGACGTGGCTGCCGTCCTGCCGCTGGGCCGTCAGCACAGCCTGCTGAACATCATCAATGTGCTGATCCAGAAACTGGGCCACCTCATCCACATCTACCTGCCCAAGGTGCTGCAGATCCTGCTGTGTGTCACCGCCTCTGTGTCCACCCTCCTGGACAACAACAGGGACCAGCTGCGAGCGGGTTGCATCAGTCCCCTGAAGAACCTGAGGCGACTCGGTATCCTGAGGATCCAGGACTTTTTTGACGGCTTCGACTCCTACAGCTTCAGTGAAGACGAGCTGGATGCGGTCTTCCAGGCTGTGATCTGGCCTCAGgtGTGTCGCCTCCCCACAGAGAGCCCTTACTCCCCCACTCCTCTACTGAAACTCATCCATGTGTGGTGCAAAAATGCCAGGTACTTCCCCCTCTTGGCCAAACAGAGGCCAAACCAGCCGGAGTGCGATGTTCTCCTTAACGTCTTCAGCCTCCTCTCAGCCAAAAATGCTTCCCCGGTGACCATCGCCATGGTAATGGACATAGCTGAGTCCCTAGCGACCGCTGAAGACTTTGTTGCCTCAGAGGCCGAGACAGAGCTGAGCGTCAACGGCTGTGTGTTCCCGGAGCCTAAAGAGGGTGCTCTCGTCACTGCAGACTCATTAAGCAAGGGCTCCAGAGTGCTGCTGCCTCACGTATCCACGCTGCTGCAGTACCTCAGCGGAGTCGTACGCAACACCGACCGACTCAGGAAGAAGAAGTTCAGGGCACACGTGGCCAAGGAGCTCAACATCCTCTCCAAGGTCAGTCGATTTGTGAGTGACAAGGAGCAGAGCTCGGTGCTCATCAGCCTGTTGCTGCCCTACCTCCAGAAATGCCACAATCCTGAAgaGACAGAAATCGACGTCCTGGCCACAGTGCAGAACCTGCTGCGACAGTGTGTGCAGCCCTCGGCCTTCCTGCGGCCGCTCAGCAAACTCTTCTCCATCATCCACAACAAGCTGCCCAGGCAGGCCCTCACTAATGTCTTCCAGACTCTGTCAGATCTGGAGCCTTCACTCACGTACATCACTGATTTAGCAACAAAGTTAAACGCGTTCGACAGTCGACACTTGGATGAGATCTACTTTGACGTGCGTCTGGCGGCGTTCCAAGACGCCACCAGGCGAGTCAAAGACATGACGACTCTGGACCTGGACTACATCAGCACCATCATGCACAACTGCTTCCACACCTTCGAGATTGGTGACATGTCGCTGGGAGACAACGCCACCTTGTGTCTGTCGGCAGTGATCACCCAGCTGGCGGCGGTCGGGGCTGGAGAGCAGCTCTACAAGGACATCGTCCAACACACCATCCTGGACGCTGTACACAAGGGGCTTCGCAGCAAGACAGAGAGCGTGCAGCATGAATACACGTCGGTGCTGGCCTGTCTGGTGAAGACCTTTCCTACCAGGAAGGAGTTCAGAGACCTGGTGCAGCTCACCAACTACAGTGACCTCGAGTCTGACTTCTTTGAGCACATGAAGCACATCCAGATCCACCGTCGGGGCCGTGCCCTCAGGAAGTTAGCCAAGCAGCTGACCGAGGGCCAGGTGGTGATGACACCGCGTTCCCTCCAGAATTACATCATGCCGTACGCCATGACCGCCCTGCTAGATGAGAAGATGCTCAAGCATGAGAGCATGATCTCGGCGTCGGTGGAGGTGGTGGGCGCCGTGTGTCGGAGGCTGACGTGGTCCAAGTACCTGTACTACCTCAAACACTTTGTCCACATCCTGCAGACAGGGCAGGCTGAGCAGAAACTGGCTGCCAGTTTGCTGGTCACAGTGCTGGAGGCTTTCCATTTTGACCACGAGACCCTCAACAGAGAAATGGAGGCTGCCAAGGCCAGAGAGGCCGGCAGTGTTGCAGTGGaagcagatgatgatgatgaggagcaAGCTGCAGCCGACGAATCGGACGCAAGCGACGATGAGGAGGCGATGCAGGTGGGCGGTGAGACCGCTCCATCGGATGTCCCCATGGAAACGGACCCCACCAGTGGAGGAAAAGAGGTCCTCTCTAAGGAAGCAGCCACCTCTGAAGCCAAGGGGCCAGCAGCTCCTTCGAAGCCCAGCGCAGTGGCCAGCGGGCTGCCGCAGAGCAAGGAGGAGCTGGAGTCTCTGATCAGCGGCATCCACACCACTGTTAGTAACAGCGTGCTGCCTCGCCTGCACAAGTGTCTCACTGCAAAGATAAAGCGGGACGATGAGCACAAAGCAGTGAAGTCAAAGGATGTGAAGGATGAGGAGGTGGCGAGGATACCGATAGCCTTCGCCATGATCAAGCTGATGCAGTCTCTGCCTATACACATCATGGAGGCCAACCTGCCTGGGATCCTGATCAAGGTGTGTGTGGTGCTGAGGAACCGCTTCCAGGAGATCCGAGACGTGGGCGTAGGGAAACGTGGGGAAAAAACCCCCCCTTTTGGGGCCCCTGCCCCcgcctgccccccccccaaagagaTGCAGGGGCTCCTGGCCAAGGGCTACCAGGTCCATGTGCTAACATTCACAGTATACCAGCTGCTGTCCGTCCTCAGTCCGACCCTGAAGAGTGGAGACCTGGACCCATGCATGAACATGCTCATCGATATCTTCAACAACGAGCTGTTCGGGCCCGTGGCCGAGGAGAAGGAGGTGAAGGGGATCGTCTCCAAGCTGATGGAGGCGCGACACAGCAAGAGCATGGACTCCTACGAGCTGCTGGCCCAGTTTTGCAGCAAGGAGAGCGTCACCAAGTTCATTTTGCCACTCAAGGAGATTCTGGAGAATTCCTGCAGTCTGAAGGTGTGTAACCGGGTGAGCGCCGTGCTGCGGCGGCTGGTCCTGGGTCTGCTCGTCAACGAGGGCATGACTGCTCATGATATCTTGCTGCTGTGCCACAGCCTGGTCAGCCAGAGTCTGCCGCTGCTCACCAAGAGAGACCGAGAGAGAGCCTCAGCTAAGCCTCCCCCAGACCCCCGACTGCCTCCTCCCAGCTGTCTGCTCCTGCCTCCGACTCCAAAGAGAGGGGGTCAGAAAGCTCCAGTCAGCAGCCGGACCAACATGCATATCCTGGTGGACGCTGGCCTCAAGCTGCTCCACCTGAGTCTGAAGAAATCTAAAGTGTCGTCGTCCGAGGCCTCGGCGCTGGAGATGCTGGATCCTTTCGTACTGCTGCTGCTCGACTGCCTCAACTCCATGCATGTCAAGgTGATCACAGAGGCTCTGGTGGCGTTCACTTGGCTGTTAAAGTTCCCTCTGCCAGCAGTGGAGCAGAACGCCGACCAGCTGACTAAGCACCTCTTTGTCCTGCTGAAGGATTACTCCAAGGCCGGAGCCGCCCGCGGGGAGAACTACAACCTGGTCCAGAACTGCTTCAAGGCCATCACCATACTGGTGAAGAATGTCAAAAGCAACCAGATCTCCGAGACACAGCTGCAGGTGCTGCTGGGATACGCCGAGGAGGACATCTATGACCAGTCTCGCCAGGCCACCGCCTTCGGCCTGCTGAAGGCGATTCTGTCCAGGAAGCTCATTGTTCCAGAGATGGAGCAGGTGATGAAAAAAGTGGCCAAGCTTTCTGTCACCGGCAGCAACGCTATGATCAGAATCCACTGTCGACAGATCTATCTGAAATACCTGCTGGACTACCCACTGGGGAAGAAGCTGAGAGAGCACCTGGACTTTGTGGTGGCCCAGCTGCCCTATGAGCACGACACAGGCAGGGAGTCTGTGCTGGAGATGCTGGCCTACATCTTCCAGACTTTCCCTCAGAAACTGCTGCTGCAGCACAGCGGCCTGTTCTTCGCCCCGCTGGCCCTGGTCGTGGTCAACGATGACTCGGCGCGCTGCAAGAAGATGGCCGCCATGGCCATCAAGACGCTGCTGACCCAGCTGGACTTGAATAACCAGAACACCCTGTTCTCCCTCGTCAACACTTGGCTAAATGCAGAGAAGGCCAGCCTGCGGCGTCTCGGGGCTCAGGTTTGCGGTCTGTTcgtggaggtggaggaggagaggtttgcCCGTCGCATGGACGACCTGCTGCCTCTGCTGGAGAAAGAGATAAACCCCGACAACTACGAAGATATCGAGGAGGAGCAGGATGAGAGGGGAGCAGACAGGCTGCTGTTCAGTTTTCTGACTCTCATCACCAAACTGAGCCAACACTGCGGCCTGCTGGAGCTCAGCAAGCCTCACGACACACTCAGTCGTATCTGGGGTCACATCGAAGCCCACCTGCGGTACCCCCACTGCTGGGTGTGGCTGACCGCCTCGCAGCTTTTTGGTCAGCTGTTTGCAGCCCATCAGGCGGAGCAGCTGGTTGCTctctggagaggagaggaagtggATGCTTCCCCTCTGTCACCAGCCACAGCCTTCATCACCAGCAGACTGGACAAGAGGATGAGAGAGTTGGCGTTATCTTTCTGTCATCAGCTACAGTCCAAGTTCCTAGACACAGCGTCAGGAGAGCAGGTGATCAAGAACCTGCTGTTCGTCGGCAAGGTGATATACCTAGTTTCCCCCGAGTCTGACATCACGCCTCCTCAGGAAGAAGTGGAGGAGGTGGAAGAAGAAGATGACAAGGATGATCggcctccctcccttctgtggttgatgaagaagctgtcgCTGATGGCCAAGAGAGAGGCAGCATACACTCCCAAAGTTCCTCTGAAGAGAACATGTGTGTTTAAGTTCCTGGGCGCGATAGCCATGGACCTGGGGAAGGAGCGACTGGGCCCCTATCTGGCCACCATCATCACTCCTCTATACAGGGAGCTGGACAGTACCTATGCTGACCAAGATCCCACCCTGAAGAACCTGGCACAGGAGCTGATAGAGCTGCTGAAGAGACACGTGGGGCTGGAGAGATTCTCTCTGGCCTTCTCTGCTGTCCAGAAGGAGTTTTCACAGAGGCGAGCGACACGCAAACGGCACAGAGCCATGCAGGCGGTGGCTAACCCAGAGATCGCAGCCAAGAAGAAACTCAAGAAGCACAAGAACAAAATCGAAGCAAAGAAGAGGAAGATAGAGTTCCTTCGGCCCGGATACAAAGCCAAGAAGCACCGGAGCCACGCGCTCAAAGACCTGGCCATGGTGCAGTGAGTCCTGGGATTTAGCAGGCAGGCATTAGCTAGACATCTTGTGGGCTAACTAGCTGCAGGTTCCAGTCTTACTTTATGCTGTTGCACAATGACTCTACTTGTGAAAACCCCAACTAACCCTGCAGAATGATAATCTAATCCATTTCTTCTGTTATGTATCCAACAGCCTCTAAAAAGGAATTAGAAATCAAGTAACAGCTGTTACACAGCAGGATTTCTCTGTATAGCTTCGCTAATGAGTTCATTCAGTTCAGTTCCTAtgaactattttttattttcctgctGTGAATGAAGTGTCGAATTCTCCTCAGATTTATATCCTGTGAAATTAAATGTACAACTTTTTGTAAGTAaagaaacaaagacatttttacCAA

Function


symbol description
utp20 Predicted to be part of 90S preribosome and small-subunit processome. Predicted to be active in nucleolus. Is expressed in immature eye; myotome; nervous system; pharyngeal arch; and somite. Orthologous to human UTP20 (UTP20 small subunit processome component).

NR:

description
small subunit processome component 20 homolog

GO: NA

KEGG:

id description
K14772 UTP20; U3 small nucleolar RNA-associated protein 20

RNA


RNA id representative length rna type GC content exon number start site end site
XM_039791043.1 True 8930 mRNA 0.55 61 19364203 19396806

Neighbor


gene id symbol gene type direction distance location
LOC120553161 NA coding upstream 17923 19311505 ~ 19346280 (+)
etnk1 etnk1,LOC104964819 coding upstream 389563 18961085 ~ 18974640 (+)
pyroxd1 NA coding upstream 404355 18951283 ~ 18959848 (+)
LOC120553379 iapp,LOC103371156 coding upstream 415688 18946158 ~ 18948515 (+)
LOC120553377 LOC105936313,LOC107099288,LOC103155794 coding upstream 422228 18930270 ~ 18941975 (+)
mapk11 mapk11,LOC100700904,LOC103382962 coding downstream 58018 19454824 ~ 19470973 (+)
trnaq-uug_5 NA coding downstream 62277 19459083 ~ 19459154 (+)
LOC120553798 LOC104924523,LOC103359230,LOC104954154,LOC103382963,LOC106531213 coding downstream 76344 19473150 ~ 19479275 (+)
LOC120553799 NA coding downstream 82111 19478917 ~ 19483152 (+)
LOC120553398 NA coding downstream 90796 19487602 ~ 19495323 (+)
LOC120553381 NA non-coding upstream 455322 18905236 ~ 18908881 (+)
LOC120553383 NA non-coding upstream 466676 18892174 ~ 18897527 (+)
G228622 NA non-coding upstream 624719 18738484 ~ 18739484 (+)
G228611 LOC102192848,LOC101469293 non-coding upstream 686638 18676351 ~ 18677565 (+)
G228605 NA non-coding upstream 700231 18604993 ~ 18663972 (+)
G228787 NA non-coding downstream 23566 19420372 ~ 19420829 (+)
LOC120553618 NA non-coding downstream 127269 19524075 ~ 19559043 (+)
LOC120553213 NA non-coding downstream 319456 19716262 ~ 19717346 (+)
G228905 NA non-coding downstream 412869 19809675 ~ 19810580 (+)
LOC120553215 NA non-coding downstream 437201 19834007 ~ 19841662 (+)
LOC120553164 NA other upstream 8652 19352983 ~ 19355551 (+)
LOC120553630 muc19 other upstream 508889 18822832 ~ 18855314 (+)
srr srr,LOC105936311,LOC103459528 other upstream 831089 18530136 ~ 18533114 (+)
G228335 ahcyl2,LOC103371314,LOC107725924,LOC107656398 other upstream 2441380 16919663 ~ 16922823 (+)
morn2 morn2 other upstream 2447275 16880276 ~ 16916928 (+)
G228784 LOC103359233,LOC104943309,LOC100709697 other downstream 13684 19410490 ~ 19413704 (+)
LOC120553210 LOC104943308 other downstream 235131 19631937 ~ 19839382 (+)
LOC120553104 LOC103364246,LOC103152567,LOC106913527,LOC103459763,LOC103459764,LOC106945279 other downstream 456122 19852928 ~ 19905952 (+)
G228924 NA other downstream 585442 19982248 ~ 19985648 (+)
LOC120553749 NA other downstream 750272 20147078 ~ 20173407 (+)

Expression



Co-expression Network