LOC120553005


Basic Information

Item Value
gene id LOC120553005
gene name NA
gene type coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053134.1
NCBI id CM020931.1
chromosome length 29109922
location 19418241 ~ 19428429 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>XM_039791044.1
AACAGCTCGAGAGATAGCCGATTAGTGACGGTGATTGAGCACGTTAACTCTGGCGCATCGCTCTCACGCTCTCTTTAAAATTTGTCGTCTTTTGGAGAAACCGCAGGCTGAATTAGGAACTGAGGCTACTTTGTTACCATGTTTGACTTAAAGAGGAGTAATAGTTTCACTTTGAACAGCCGTGAGACGGAGTTCAGTCGAGTGGCGGTCAGACGGAAAGTCAGTGCTGCTGTGGACTGCCTCGCCTCACACACAGCCTGCTGGTGCGAGTCCTACTCCTGCAACGTGTCCCAGACGGGAGGATGGAGAACAGTCCATGACTGGGGTGTGTGTGGTCCTCGATATTGTGTGCACGTCGCAGACACCGTGAGTGATGAAGTGCCTCCTAAACCAGCTGACCTCCAGAGTCCTCTGAGGGCAGGACAAGCTCGAGCCCTCAGTCCCTCTACAGGGAAATTACTACCTCAGCAAGTTAGTGGCACAGAGCAAGACCAGAGTCCTAACAGAAGTTGCGGagtttctgtttcctgtgtcAGCCCAGCACAGAGTTGTCTAGGCTCCCCTAGTCCTATCAGAGGAGGAGGGAACAGTTTTTTGAATGTAGTGTCTGAAGTACGGATTAGCCCTGCCAGACATACACAGGGGATTCCACATTTTACAAGCAGTCCACTTTTAGGATCTCCAAGTCCAGGCAAAAGAAGCATTCAGAGACATAGCCCATTTAGGGAAGGAGGCCACAGCCCTGCTAAACTGTCCCCAAGGAACCGTAGCCCTCTTGCACGATTACTGCGGACCCCCAGCCCTGTGCAGGGGAGGATGGGGAGCTACAGTCCCACCAATAACTCTAAATCCTGGCTCGGACTGCACAGAATCCCAAGCAGCAAAATGGAAGGACGAGAGAAGAGAGTGTGGAAATCTTTGAGCGTGCCTGACTTGATCCTTCTCTTGAAGGAGAGCAGGATTCCCACCGAAAAAGTTGAACGCGCTCCACTGAAACCACTGCAATTACCCAACTGCAGTGGGCCAGCCAGCGCCATCAAATCACCGGTTAACCATAGACTCAATCATGCCACAAGTGAAGCCCATCTATTAAGCAACGGTAAAGAGCAGTCCCCAGGACAAATGAAGGGCATAGTTCAGGGGAGAGATTGCACAATAGTAAATGGGTCGGGAAAAAATGAGAAAATGGAAGAAGGCAAGATACCCGTTGTATATGGCTCTAAGTCTTCCTGCCAGTGGAATGAGGCAACTATAGAAGATGGAAGGATTCACAAGGAGTCTAAAGGTGAACAAAAGGATGAGGAgatgaggaaggagagaggagaaggcgAGCCAAAAGATGAAGAGAACATCGAGCAGAAATTGTACAAGATAGCCAATGAACTCCTGCAGACGGAGAGAGCCTACGTGGCTCGTCTCCACCTGCTAGACCAGGTGTTCTGCTCACGCCTAACAGAAGAGGCAGGTCGAGGGTCGTTTCCTCCTGACGTGATAAGAAATATCTTCTCAAACATTTCCTCTCTATACTCCTTCCACAACCAGTTCCTGCTACCTGACCTGGAAAGCTGCATCAGCCACTGGTGTGAGAGCCCAGGCCTGGGTACTGTTCTGCTGCAACACGCACCCTTCCTGAGGATGTATGCGGACTACGTCACAAACTTTGACCAGGCCATGGAGCTGGTGAGGACCTGGACTGAACGCTCCTCTGCTTTCAGAAACATAATCCAGGACATACAGAGTCAGGAGGTATGTGGCAGCCTGACCCTGCAGCACCACATGTTGGAACCAGTCCAGCGGGTTCCACGTTATGAGATGCTGCTCAGGGATTACTTGAAGAACCTGCCCAAAAACCACCCAGATTATGATATTGCTTACAAATCCTTGCAGACTATTTCCATGGCAGCCATCCACTCAAACAGCGCCATCCACAAAGCTGAGAGCTTAAAGCGGATGGTGGAGATCTATGAGATGGTTGGAGAGAAGGAGGTGGTCAACCCGACGAACGAGTTCCTCAGGGAAGGTCGTCTGCTCAAGCTTGCTGCCAGGAACACGTCTGCCATGGAGAGGCACCTCTTCATGTTCAACAACTTTCTGATGTGCTGCACTCCTAAGTTCAGCCTAGTTGGGCAGCGTTTTACTGTCCGCTGCAGGATCGGAGTGGACGGCATGCAGGTGCAGCAGACCACCAATGAAGACCACCCATACACCTTCCAGGTCTCTGGAAAGGAGAGGACCCTTGAGCTGCaggccagCTCTAAACAAGACCGAGATCAATGGATAAAGgTAATTCAGGAAGCCATTGACATCTTTCAGAAGAACAATGAAACCTTCAAATTGGCTTCCAGGGAGCTAAATATACAAGAACCAACTGAGGAACTCGGCCGACGTGCCCCTCGCTGGATCAGGGACAACGAGGTGACCATGTGTATGAAATGCCAGGACGCTTTCAACGCACTCACCAGGAGAAGACATCACTGCAGAGCCTGTGGCTGTGTGGTGTGCTGGAAGTGTTTAGACAATAAAGTGGCTTTAGAGTATGACGGCAACAAGCTGAACAAAGTGTGTAAAGCCTGCTACTCCACCCTGACtggtcagagggaggagaggataCTGGAGTCGGAGGCATCTCCAGTGTCCAGTGACTGCGTAATGAGTGGCTTCCTGCTGTATGGTGACAACCCCAAGACCTGTCAACAGGTGTGGACCGTTATCAGCCGGACTGAACCTCCGGCCCTCCACCTGTATACTGCTCCACAGGACGTGAAGCCCCTATCCAGTATACCTCTACTGGGCTGCAGTGTGGAGGATTCCCCTCAGGAGCTCCAGGGTCAGCCTTGTTTCGGTTTAAACCAATCCAAAACCACCCACACTTTCTTCTGTGATAGATTGGACGTCAAACAGAGCTGGCTGACGGTTCTGAAAGTTGCAGTGATAGGCAGGCAGTGCACGCTTAATGGCTACGGCATCACCACCAATAGCTCCACATGTGGCATTAGTGGCATTGTCAGTGATGGAAGCGTGTGTACTGGTGAGGAATGTATCGTCACTGGCGACGAGGTAATCCACTCCTGAATGTTTGAGATCAGGTACTACGGAAAGAACTCTTACAAGCATGTACACTCGCACAACACCAAAGGAAAGTCCATTGATGTTAAAGACAGTAGCTTTGAACTAAACATTtgataaaatgaatgaaatctaGGAATGTAAAGGTTGTTAATAATATTCAGACTGAAAACTGTGTTTTCCTTACAAGTGGCAATGCACTTTATTTCTAAAATggtttacagtaaaataaataaagtgaagGTGTTTTAA
>XM_039791045.1
AACAGCTCGAGAGATAGCCGATTAGTGACGGTGATTGAGCACGTTAACTCTGGCGCATCGCTCTCACGCTCTCTTTAAAATTTGTCGTCTTTTGGAGAAACCGCAGGCTGAATTAGGAACTGAGGCTACTTTGTTACCATGTTTGACTTAAAGAGGAGTAATAGTTTCACTTTGAACAGCCGTGAGACGGAGTTCAGTCGAGTGGCGGTCAGACGGAAAGTCAGTGCTGCTGTGGACTGCCTCGCCTCACACACAGTGCCTCCTAAACCAGCTGACCTCCAGAGTCCTCTGAGGGCAGGACAAGCTCGAGCCCTCAGTCCCTCTACAGGGAAATTACTACCTCAGCAAGTTAGTGGCACAGAGCAAGACCAGAGTCCTAACAGAAGTTGCGGagtttctgtttcctgtgtcAGCCCAGCACAGAGTTGTCTAGGCTCCCCTAGTCCTATCAGAGGAGGAGGGAACAGTTTTTTGAATGTAGTGTCTGAAGTACGGATTAGCCCTGCCAGACATACACAGGGGATTCCACATTTTACAAGCAGTCCACTTTTAGGATCTCCAAGTCCAGGCAAAAGAAGCATTCAGAGACATAGCCCATTTAGGGAAGGAGGCCACAGCCCTGCTAAACTGTCCCCAAGGAACCGTAGCCCTCTTGCACGATTACTGCGGACCCCCAGCCCTGTGCAGGGGAGGATGGGGAGCTACAGTCCCACCAATAACTCTAAATCCTGGCTCGGACTGCACAGAATCCCAAGCAGCAAAATGGAAGGACGAGAGAAGAGAGTGTGGAAATCTTTGAGCGTGCCTGACTTGATCCTTCTCTTGAAGGAGAGCAGGATTCCCACCGAAAAAGTTGAACGCGCTCCACTGAAACCACTGCAATTACCCAACTGCAGTGGGCCAGCCAGCGCCATCAAATCACCGGTTAACCATAGACTCAATCATGCCACAAGTGAAGCCCATCTATTAAGCAACGGTAAAGAGCAGTCCCCAGGACAAATGAAGGGCATAGTTCAGGGGAGAGATTGCACAATAGTAAATGGGTCGGGAAAAAATGAGAAAATGGAAGAAGGCAAGATACCCGTTGTATATGGCTCTAAGTCTTCCTGCCAGTGGAATGAGGCAACTATAGAAGATGGAAGGATTCACAAGGAGTCTAAAGGTGAACAAAAGGATGAGGAgatgaggaaggagagaggagaaggcgAGCCAAAAGATGAAGAGAACATCGAGCAGAAATTGTACAAGATAGCCAATGAACTCCTGCAGACGGAGAGAGCCTACGTGGCTCGTCTCCACCTGCTAGACCAGGTGTTCTGCTCACGCCTAACAGAAGAGGCAGGTCGAGGGTCGTTTCCTCCTGACGTGATAAGAAATATCTTCTCAAACATTTCCTCTCTATACTCCTTCCACAACCAGTTCCTGCTACCTGACCTGGAAAGCTGCATCAGCCACTGGTGTGAGAGCCCAGGCCTGGGTACTGTTCTGCTGCAACACGCACCCTTCCTGAGGATGTATGCGGACTACGTCACAAACTTTGACCAGGCCATGGAGCTGGTGAGGACCTGGACTGAACGCTCCTCTGCTTTCAGAAACATAATCCAGGACATACAGAGTCAGGAGGTATGTGGCAGCCTGACCCTGCAGCACCACATGTTGGAACCAGTCCAGCGGGTTCCACGTTATGAGATGCTGCTCAGGGATTACTTGAAGAACCTGCCCAAAAACCACCCAGATTATGATATTGCTTACAAATCCTTGCAGACTATTTCCATGGCAGCCATCCACTCAAACAGCGCCATCCACAAAGCTGAGAGCTTAAAGCGGATGGTGGAGATCTATGAGATGGTTGGAGAGAAGGAGGTGGTCAACCCGACGAACGAGTTCCTCAGGGAAGGTCGTCTGCTCAAGCTTGCTGCCAGGAACACGTCTGCCATGGAGAGGCACCTCTTCATGTTCAACAACTTTCTGATGTGCTGCACTCCTAAGTTCAGCCTAGTTGGGCAGCGTTTTACTGTCCGCTGCAGGATCGGAGTGGACGGCATGCAGGTGCAGCAGACCACCAATGAAGACCACCCATACACCTTCCAGGTCTCTGGAAAGGAGAGGACCCTTGAGCTGCaggccagCTCTAAACAAGACCGAGATCAATGGATAAAGgTAATTCAGGAAGCCATTGACATCTTTCAGAAGAACAATGAAACCTTCAAATTGGCTTCCAGGGAGCTAAATATACAAGAACCAACTGAGGAACTCGGCCGACGTGCCCCTCGCTGGATCAGGGACAACGAGGTGACCATGTGTATGAAATGCCAGGACGCTTTCAACGCACTCACCAGGAGAAGACATCACTGCAGAGCCTGTGGCTGTGTGGTGTGCTGGAAGTGTTTAGACAATAAAGTGGCTTTAGAGTATGACGGCAACAAGCTGAACAAAGTGTGTAAAGCCTGCTACTCCACCCTGACtggtcagagggaggagaggataCTGGAGTCGGAGGCATCTCCAGTGTCCAGTGACTGCGTAATGAGTGGCTTCCTGCTGTATGGTGACAACCCCAAGACCTGTCAACAGGTGTGGACCGTTATCAGCCGGACTGAACCTCCGGCCCTCCACCTGTATACTGCTCCACAGGACGTGAAGCCCCTATCCAGTATACCTCTACTGGGCTGCAGTGTGGAGGATTCCCCTCAGGAGCTCCAGGGTCAGCCTTGTTTCGGTTTAAACCAATCCAAAACCACCCACACTTTCTTCTGTGATAGATTGGACGTCAAACAGAGCTGGCTGACGGTTCTGAAAGTTGCAGTGATAGGCAGGCAGTGCACGCTTAATGGCTACGGCATCACCACCAATAGCTCCACATGTGGCATTAGTGGCATTGTCAGTGATGGAAGCGTGTGTACTGGTGAGGAATGTATCGTCACTGGCGACGAGGTAATCCACTCCTGAATGTTTGAGATCAGGTACTACGGAAAGAACTCTTACAAGCATGTACACTCGCACAACACCAAAGGAAAGTCCATTGATGTTAAAGACAGTAGCTTTGAACTAAACATTtgataaaatgaatgaaatctaGGAATGTAAAGGTTGTTAATAATATTCAGACTGAAAACTGTGTTTTCCTTACAAGTGGCAATGCACTTTATTTCTAAAATggtttacagtaaaataaataaagtgaagGTGTTTTAA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_039791044.1 True 3318 mRNA 0.50 16 19418241 19428429
XM_039791045.1 False 3195 mRNA 0.49 15 19418241 19428429

Neighbor

gene id symbol gene type direction distance location
arl1 arl1 coding downstream 10883 19396856 ~ 19407358 (-)
slc5a8 slc5a8 coding downstream 56131 19355872 ~ 19362110 (-)
dnai7 NA coding downstream 64750 19346318 ~ 19353491 (-)
bcat1 NA coding downstream 108557 19297922 ~ 19309684 (-)
LOC120553632 abcd2 coding downstream 686575 18711014 ~ 18731666 (-)
trnal-cag_18 NA coding upstream 10088 19438517 ~ 19438599 (-)
trnal-cag_19 NA coding upstream 14803 19443232 ~ 19443314 (-)
trnal-cag_20 NA coding upstream 18592 19447021 ~ 19447103 (-)
trnal-cag_21 NA coding upstream 19635 19448064 ~ 19448146 (-)
trnal-cag_22 NA coding upstream 23559 19451988 ~ 19452073 (-)
G228855 NA non-coding downstream 3639 19414330 ~ 19414602 (-)
G228839 NA non-coding downstream 42446 19375459 ~ 19375795 (-)
G228838 NA non-coding downstream 42880 19374204 ~ 19375361 (-)
G228836 NA non-coding downstream 52713 19365124 ~ 19365528 (-)
G228835 NA non-coding downstream 53825 19364156 ~ 19364416 (-)
G228851 NA non-coding upstream 52392 19480821 ~ 19481084 (-)
G228869 LOC104924522 non-coding upstream 52795 19481224 ~ 19481477 (-)
G228870 NA non-coding upstream 53743 19482172 ~ 19482617 (-)
G228871 NA non-coding upstream 54438 19482867 ~ 19483153 (-)
G228880 NA non-coding upstream 70809 19499238 ~ 19499610 (-)
sox5 sox5 other downstream 147905 19028609 ~ 19270336 (-)
LOC120553633 slc2a13,LOC103369283 other downstream 595151 18738396 ~ 18823090 (-)
gramd4a gramd4,LOC103376144 other downstream 996834 18363259 ~ 18421407 (-)
tafa5a fam19a5,LOC103356475,LOC102793695 other downstream 1317246 17830616 ~ 18100995 (-)
G228465 NA other downstream 2116043 17295122 ~ 17302198 (-)
G228934 fam19a2,LOC103364248 other upstream 304673 19733102 ~ 19807098 (-)
etv6 etv6 other upstream 378385 19806814 ~ 19839350 (-)
rerg rerg other upstream 638466 20066895 ~ 20122393 (-)
cdk17 LOC104930593 other upstream 872663 20301092 ~ 20354627 (-)
G229199 NA other upstream 1529228 20957657 ~ 20958220 (-)

Expression


Co-expression Network