glt8d2 (glt8d2)


Basic Information

Item Value
gene id glt8d2
gene name glt8d2
gene type coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053134.1
NCBI id CM020931.1
chromosome length 29109922
location 23868156 ~ 23885592 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>XM_039791068.1
AAGTGGGGTTGCTGGCGAGTGTGAGTCTCAGTCCAGAGAGGTTTTAACAACATGGTCCATGAACACCAGGAAGGAGACTGGCCGTAATTACCACCCTTTTTCTGatgTCGTTGGAcgcaaaaatgaaaaatggctCTCCTGAGAAAAATTAACCGCTTCCTCCTGGTGCTGCTGGTGCTGATGGTGGGCCTCCTGCTGCACAGTATACTGCTCAGAGCCTCCGCTCGGCCCACACTCTCAGGTCACTGGAAGAGCGTCGGATCTGCAGCGGGAGTTCCCACAGTGAGAGTGTCGGAGGCGGATCATGTCATCCCCGTCGTCATATGTGCATCGGAGGAGCGTACTGGTGCAACCATGGCAACCATCAACAGCGTCTATAGCAACACAGACGCCAACGTGTTCTTCTATATTGTCACTCTTCGTGATGCCGTGAAACTGATGAGGCAATACATAATGAGGACTAAACTGAAAGGCATCAAATATAAGATATTGGAATTCAACCCCATGGTTCTAAAAGGAAAGGTGAAGCCAGATTCCTCTCGACCCGATCTGTTACATCCACTCAACTTTGTGCGTTTTTACCTACCTCTGCTTGACATCAACCATAGGAGGGTGATATACTTAGACgatgatgtcattgtgcagGGCGACATCAAGGATCTGTTTAATATCAAACTGAAGCCAGGTCATGCTGCTGCCTTCTCCACTGACTGCGACCTGCCCTCCACACACGAGATGGTGCGCAGCATCGGCATGCAGACAACCTACATGGGCTTCCTGGACTATAGGAAAGAGATAATTAGAGACCTGGGCATCAACCCAACAGATTGCTCATTCAACCCTGGAGTGTTTGTGGCAGATGTCAGCGAATGGAAGAAACAGAAGATCACTAAACAGCTGGAGAAATGGATGGAGGAGAATTTCAGGCAGAACATATACAGCAGTGCCATGGCTGGAGGCGTGGCGACTCCGCCCATGCTAATAGTGTTTTATGACAAATACACAACACTGGACCCAATGTGGCACGTCAGACACCTGGGCTGGAGTCCAGATGCCCGCTATTCAGAGAGCTTCCTACAGGAGGCGCACCTGCTGCACTGGAATGGTCCATTTAAACCATGGAATTACCCTGCTGTTCACATGGATCTGTGGGAGAGGTGGTTCATCCCAGACCCCTCCAGAAGGTTCTCCTTGGTGCGGCCTGAGAGCAAAGGCTGAGGTCTGGGGAACATATCATGTCTGAGCCACAGGCGGACGAAGCATGTGCAGGTCAGGGCTGCGGTcgaatagtagaaaaaaaaaattacgtcTTTTTCAAAACCTTTTTCCTTGACCTCGATATAAAACATCATGAGGTCAAGGAAAGATGTGAAGGAGAATTCATAAGCACTTAGAAAAAGACAACCGAGGTGCTCAGACAATCTGACTGTACATACACTGGGCTACGTAGCTGGACTACTAAAAGTACATCTTAGATACTTCGCCCTGTGTGTTTGACCGTGTTGTTTCATACTGGTTTTAAAAACGTTGACAACGCAATTTATATATTACCAAGGTTACAATTTGAATAAAAAAGGAACCAGGCTGTGGttgggttggttcagtgggtagagcaggggcacatatactgagaggtttatgcctcgacacaga

Function

symbol description
glt8d2 Predicted to enable glycosyltransferase activity. Predicted to be located in membrane. Predicted to be integral component of membrane. Predicted to be active in Golgi apparatus. Orthologous to human GLT8D2 (glycosyltransferase 8 domain containing 2).

NR:

description
PREDICTED: glycosyltransferase 8 domain-containing protein 2

GO:

id name namespace
GO:0008152 metabolic process biological_process
GO:0016757 transferase activity, transferring glycosyl groups molecular_function

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_039791068.1 True 1653 mRNA 0.48 10 23868156 23885592

Neighbor

gene id symbol gene type direction distance location
sbf1 sbf1 coding downstream 58810 23718339 ~ 23809346 (-)
cbll1 cbll1 coding downstream 184088 23677168 ~ 23684068 (-)
slc26a5 NA coding downstream 251080 23594352 ~ 23617076 (-)
dnajc2 dnajc2 coding downstream 279396 23562160 ~ 23588760 (-)
phax NA coding downstream 336349 23529757 ~ 23531807 (-)
net1 net1,LOC104963784,LOC103383002,LOC107560732 coding upstream 180817 24066409 ~ 24109573 (-)
podxl podxl coding upstream 371191 24256783 ~ 24284709 (-)
LOC120553465 nfyb coding upstream 479746 24365338 ~ 24375224 (-)
slc41a2b LOC103365955,LOC104923736,LOC106530824 coding upstream 623184 24508776 ~ 24565806 (-)
trnap-agg_20 NA coding upstream 691358 24576950 ~ 24577021 (-)
G229909 NA non-coding downstream 154479 23713456 ~ 23713677 (-)
G229908 NA non-coding downstream 160959 23702704 ~ 23707197 (-)
LOC120553168 NA non-coding downstream 226652 23623580 ~ 23641504 (-)
G229872 pmpcb non-coding downstream 307814 23538248 ~ 23560342 (-)
G229867 NA non-coding downstream 340617 23527105 ~ 23527539 (-)
G229952 NA non-coding upstream 60905 23946497 ~ 23948780 (-)
G229987 NA non-coding upstream 194935 24080527 ~ 24081153 (-)
LOC120553435 NA non-coding upstream 232140 24117732 ~ 24202125 (-)
G230067 NA non-coding upstream 318438 24204030 ~ 24225411 (-)
G230089 NA non-coding upstream 429491 24315083 ~ 24315857 (-)
LOC120553046 NA other downstream 4182 23858219 ~ 23863974 (-)
LOC120553170 NA other downstream 156352 23690519 ~ 23711804 (-)
G229907 NA other downstream 167958 23699697 ~ 23700198 (-)
G229716 NA other downstream 628583 23104760 ~ 23239573 (-)
glipr1a NA other downstream 657659 23203768 ~ 23210497 (-)
G229950 gdi2,LOC100708443,LOC102215003 other upstream 22964 23908556 ~ 23914692 (-)
sult4a1 sult4a1,LOC102784496 other upstream 1305669 25191261 ~ 25217693 (-)
LOC120553115 NA other upstream 1709986 25595578 ~ 25601380 (-)
mkrn1 mkrn1 other upstream 2285728 26171320 ~ 26196510 (-)
G230594 mrps33 other upstream 2490100 26375692 ~ 26381365 (-)

Expression


Co-expression Network