prl2 (LOC104964766,LOC103356682,LOC100697904)


Basic Information

Item Value
gene id prl2
gene name LOC104964766,LOC103356682,LOC100697904
gene type coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053134.1
NCBI id CM020931.1
chromosome length 29109922
location 25546940 ~ 25553001 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>XM_039791084.1
TGGTCAGTAAGGGACCCTCATATGAGGCTTCAGGGATCTTTGAATAGAAAAGCTTCTGCACCATCTGTTCGGAGACAAGAGCTCCTCCGTGCTCTGCAGGATGCCTCGAAACATCAGATCAGTGTCTTTTGAGgtgttggtctgtctgttgtTCTGCAGCAGACTGACCAGCGTGGGTGCATCACCTATCTGTACCAATGCCCACGCTGGGTGCCACGTCCTCTCCCTGTCTAACCTGTTTGACCGGGTCATCCAGCACTCAGCCAGGATGCACGGTATTTCAAATGACCTTCACTCCGAGTTTGAGCAGTATTTCCTGCCCAGTAGGAATCAAATTGGCCGGGTCAGTCGCAACTGTCATacctccaccatcctcaccccAAATGGCAAGGAGAACGCTCAGAGAATGGCGAGAGAAGAGCTGACGGAGGTGATTCTGAAGCTCTTGGTGGCATGGAGGGATCCTCTGTGGCATTTCCATCATAGCATGGCTCACTATGATGACTTCAACAACTTCAGCTCCAATAAAGCTCTTGAGATGAGCGACATGGTGCACGAGCTACGCAAAGGTGTAGAGAAAGTGGCTGAGAAGatGCAGGTGTCGGGGGTAACAAGTAACACCGTCAACAGCCTGACTTCTCCCAAGGCTTTGCTGCCATCTGAAAGTACAGAGTGGCGCCTGATGAAAGACTACGACCTCCTCTACTGCTTCCGCCGAGACTCCAACAAGGTTCAAAACTACCTGAAAATCCTCAAATGTCGCATTGTGCCAGACCACGGATGCTGAAGGCCAGAAACTTCTCGGAAATATCAACACGTTGGAATGGAAATGCTTCGGTTAGAGACTCCGCGGATAACGCACGCATGTTCACTTCTATCACGACTGGAGTTCTGCTGTGAGTGTGGACATTGTGACTTTACTACAGACAGGATGGAATGAGTGCAATGCATGTTATGATGCTGTATGccatgtttaaataaaataccatataaaacatttcaaaaaacaTCGATggaa

Function

NR:

description
PREDICTED: prolactin-like

GO:

id name namespace
GO:0005576 extracellular region cellular_component
GO:0005179 hormone activity molecular_function

KEGG:

id description
K05439 PRL; prolactin

RNA

RNA id representative length rna type GC content exon number start site end site
XM_039791084.1 True 1018 mRNA 0.49 5 25546940 25553001

Neighbor

gene id symbol gene type direction distance location
LOC120553524 dennd5b,LOC102198357 coding upstream 55208 25402355 ~ 25491732 (+)
LOC120553526 NA coding upstream 146733 25392432 ~ 25400207 (+)
ttll12 ttll12 coding upstream 197599 25263996 ~ 25349341 (+)
LOC120553672 LOC103361951,LOC100711848,LOC101487241 coding upstream 286590 25244537 ~ 25260350 (+)
pnpla3 LOC103361965,LOC104964946 coding upstream 305002 25218540 ~ 25241938 (+)
cdnf LOC104964768 coding downstream 15538 25568539 ~ 25574022 (+)
tmbim4 tmbim4 coding downstream 55505 25608506 ~ 25614445 (+)
lemd3 lemd3,LOC104964688,LOC106576661 coding downstream 68442 25621443 ~ 25640090 (+)
hmga2 hmga2 coding downstream 142880 25695881 ~ 25753815 (+)
dera dera coding downstream 215736 25768737 ~ 25779615 (+)
G230339 NA non-coding upstream 42504 25503664 ~ 25504436 (+)
G230337 NA non-coding upstream 46731 25499847 ~ 25500209 (+)
G230336 NA non-coding upstream 51541 25495148 ~ 25495399 (+)
G230327 NA non-coding upstream 52585 25436151 ~ 25494355 (+)
G230259 NA non-coding upstream 169339 25376347 ~ 25377601 (+)
G230401 NA non-coding downstream 42591 25595592 ~ 25616671 (+)
G230404 NA non-coding downstream 65201 25618202 ~ 25619259 (+)
G230406 NA non-coding downstream 97657 25650658 ~ 25952405 (+)
G230415 NA non-coding downstream 168652 25721653 ~ 25722486 (+)
G230417 NA non-coding downstream 224010 25777011 ~ 25777634 (+)
LOC120553523 NA other upstream 172944 25362882 ~ 25373996 (+)
G230148 LOC102781993,LOC101465723 other upstream 768682 24620812 ~ 24778258 (+)
LOC120553083 NA other upstream 1232233 24309542 ~ 24314707 (+)
LOC120553686 LOC105929833,LOC107382334 other upstream 1601300 23934300 ~ 23945640 (+)
adm2a NA other upstream 1698316 23833018 ~ 23848624 (+)
msrb3 msrb3 other downstream 88839 25641840 ~ 25662819 (+)
LOC120553706 NA other downstream 257406 25810407 ~ 25812828 (+)
arhgef39 arhgef39 other downstream 485187 26038188 ~ 26106823 (+)
mrps33 mrps33,LOC106591474 other downstream 819713 26372714 ~ 26381109 (+)
LOC120553759 NA other downstream 1140355 26693356 ~ 26971853 (+)

Expression


Co-expression Network