LOC120553032


Basic Information

Item Value
gene id LOC120553032
gene name NA
gene type coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053134.1
NCBI id CM020931.1
chromosome length 29109922
location 22892813 ~ 22917577 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>XM_039791088.1
AGGttctgatttttgtttttaatttaaaaagcgATTTAGTGGTTCTATTTTTCTGTTGTGGCCTTTACGGTATAGCTAGCCTATATCTTGGCTAACATAACATCTTACCTTATTGCCATTAACTGTTAAGTAAGGCGCATTCTTTATTAATCATTATAAAGGAACTTCCGAGCGGCGCCTGAAGGCAGCGCACACCTGTCACTCATTAGGACATAAGGACAGCTAAGGCTTGAATAAACCCGAAATTCTTTCCTTCGCCggaattacaaagaaaaatGAACTCCTTCGAGTTTTCGTTGATCGTTTTCATACTGGTGTCTCGCGCTCTATCGTTCGGACGTAACGACGATATTTCCTTCTCACTATGCTGGATGGGCAAGGACGATGCTCTGGAAAGGTTAAATGGAAACATATGGCTCAATGACGCATCACTAAAACTCATCAGTAAGGTGGGTAAAGTGACCTCCCTGACGGTGTCCCCAGCTGTTGACAACAAGCTAACACTAAAGTATGGAGGCTCTGTTCAGGCATGGACTTTGAGAATCGACCCACGTGCAAACTTCACTAAGATCCGAGGGCTGCAGAAACCCCTAAAGCAACCAACAAGTGTCACCAAGGGCTTCCTGGACATGATGAGTCCCAATGAAGTGTTTTCATGTGAAAATGGCACGCTATTCTTCCACCAGGATGAAAACTTCTTCCTTGCACTTGGCCACACTATGCATGTCCCAGTCAAGCTGGAGTCCAGGACTCCCTCCATGTTGCAGGTCTCCTGGGTGGAGAACTGCCCAGCAGTCAGCAACAACTGCACGGTGACACTGTACCACACTGAAAGTGGCTCCTATAAACCTCTGAGCATGGACACTACCACCAACAACCACTACCACTTCACCGCTCTGGACTCCTGCAGCCTCTATGTGGCCTGTGTGGAGACTGCGGCCACTCACTCCTTCACCTGCCTCTCGACTATTACTGACCCAGACATTCCCAAGGACTTTGAGGTGACGTCGTGGAACAGCAGCAGCATATCGTTGGCCTGGGACTGCCCTGCGAACTGCAAgttctcctccttccttctcacCGCCTTCTACCTCAATGGCGCAGACCAAATCACAGAGGAGGTGCTCTTGTGGCACAAGGAGGACACCTTTGTGTTCATCCTGTCTGACCTGGAGCCCTGCACCAGGGTTAGGTTTGGCCTGCAGACGGTCTGCCAGGCGGGGATAGAGTCCCGCTACAGCACGATGGTCCTCAACGATGGCAACTCTGTTCACTCCAGCATTGAGGCCTTGCAACAGACATCGTATGGCCACGACAGCTACACCCTGAGCTGGGAGTCCCGGGACACCTCGTCCATCTCCATGTTCAGGGTCTACCACGAGGGGGAGCTGCAGGGCACCACGCTCGTCACCAACTTCACTGTGGGGGGGCTGCTGCCATGCCAACAGCACCAGGCTAAGGTGGAGGCGCTGTGTGGAGACAGTGTGCTCATGAATGCCAAGACAGTTGTGGCACACACAGGACCTCTGGGTGTTTCCGAGCTCAGGTATCACTCCAAAGACTCCACCGCCCAGTGGAAACCCTGCACCACGCACCAGCCCGCTGTGTCCTTTGTATATGAGCTGTCTCTGGAGAACGGCACCACCATCCAGAGCAGCCGGGTGACTGACACAGAGCTGCCTCTGCCAGGGCTGGAGGAagggaagtggaacaaacagtGGAAGACTAAACATTCTCATGTGGGTTTTGAGGGAGATAATTCATCCTTAAAGTTCTTCGTGAGGGCTACTGGATCTTCTCTGGACCAAGAGGTGCAGTTAGATCGTTCCAGCATGGGTCTCACAATGGTCGTGCCCTGGTCACTGCCTGAGGATCTACTGGAGGGCATGTCGGAACCGAGAGCTGAAATGGAGAAGATCTTTCAAGATAAGctacAGGAGATGTTGAATGACTTTCATCAGCGAGCCCACGTTGAGCTGGTTGCAATTGAACCTGCAGGCGagccacacaaaacatacattgTGTTCATGTCTTTTGATGCATCCAAAACTGAGGAAGACATCCCCCTGCCTGTTGAAGATCAGCTGGACTACATTCACTCCCTTAATACAGACCACATGACAGTTACAGATGGGCTCATTTATTGGGAAGGTCCTGATCTGTGTGCTTTCTCCAAACAAACTTTGTGTCCTCTTAACTCTCTGTGCATCAACACCCTGGGCTCCTACGCCTGTTTGTGCCAACATGGCTACTACGATGTGAGCTCTGTCATCGACCCCCCTGTGGCTTCACATCCAATCTGCAATGAAAAAGGACTTTTCAGCCACTGTCTGGATAAACTTATGACTGGTAGTATAGCAAAACCCTACCTGACTTCTCACATCGGGGGAGAGTTAGACGTGAGGCTGAACGATGGCTGGTGCCCTGTGGATGAGACGGAGATGTTCTACTACTTCCGCATCTCACGAAAAGCCTCTGAATGTGGAACTGAGAGGCGGgtgaacaAAACCCACATCCAGTTACAAAACACTCTGACTGTGACCATCAGAGATAAAATCATCACCCGACAGGATCTAAAAGTCGTCTGGAAGTGCATCTACCCGCGCCGTTATGTACGCAACGCTCAAGTCAGTGTGGATGTTGAGTGGCACTCCTCCGCCTCCCTGGTGGCGTTCAACTCCTCCCTGCAGCTAGGCCTGACCATGACCCTGCACGCTGATGAGTCTTACACCGACAGCTACAGGGATGCCATAACCATGGGGCCTGAGGACACTCTGTTCTCCCAGGTGGCCCTGCAGACCAACAACTCCTTTGCTTCAGACGTGCTCCTGCGGGTGGAGTCATGCTGGACCACTGAGAGCCCCGACCACCAGGACACAGTCCAGGGTGTTCTTCTTCAGGATGGCTGTGCTTTTGACCACACGTTCCAGTGGCTCTCTGTAAACGGCCTGGCACAGAACAGCAGATTTTCCATTCAGATGTTCACCATGCCCAAAGGGTTGCCCATCTACATTCATTGCCTGGTCAACATATGTGGACATGATGAAGACTGTACAAAGAATTGCAGCAGCCAGCAGCGCACCAAGCGGTCAGGGAGCCAGATGGACGGAGAGGGGGCCCAAGCTGCTGTAGTGTCTGCTGGACCTCTGGTGGTCAACAGGAGGGGGACGTCAGCTGTCCCACCGTCTTACTGGTCAGAGCATATGACCATGATCCCCATTGTGGCCGGATTAATAGGCTTTCTGGGAGTAACCGTACTCTCAGTGAGTGCAACCAAAGCAATCATGACTTACTATGAGCAACTACGGCTGCAATAAAGTGTTTGGAACACCATCTGTGAGTGTGTAATGATGATCATGGAGACAGTTAA
>XM_039791089.1
TCTCAAAGTCTTTGTTGATGATGAACGGCTCGTCTCTCACCAGCAGCCCAGGGAACTTCCGAGCGGCGCCTGAAGGCAGCGCACACCTGTCACTCATTAGGACATAAGGACAGCTAAGGCTTGAATAAACCCGAAATTCTTTCCTTCGCCggaattacaaagaaaaatGAACTCCTTCGAGTTTTCGTTGATCGTTTTCATACTGGTGTCTCGCGCTCTATCGTTCGGACGTAACGACGATATTTCCTTCTCACTATGCTGGATGGGCAAGGACGATGCTCTGGAAAGGTTAAATGGAAACATATGGCTCAATGACGCATCACTAAAACTCATCAGTAAGGTGGGTAAAGTGACCTCCCTGACGGTGTCCCCAGCTGTTGACAACAAGCTAACACTAAAGTATGGAGGCTCTGTTCAGGCATGGACTTTGAGAATCGACCCACGTGCAAACTTCACTAAGATCCGAGGGCTGCAGAAACCCCTAAAGCAACCAACAAGTGTCACCAAGGGCTTCCTGGACATGATGAGTCCCAATGAAGTGTTTTCATGTGAAAATGGCACGCTATTCTTCCACCAGGATGAAAACTTCTTCCTTGCACTTGGCCACACTATGCATGTCCCAGTCAAGCTGGAGTCCAGGACTCCCTCCATGTTGCAGGTCTCCTGGGTGGAGAACTGCCCAGCAGTCAGCAACAACTGCACGGTGACACTGTACCACACTGAAAGTGGCTCCTATAAACCTCTGAGCATGGACACTACCACCAACAACCACTACCACTTCACCGCTCTGGACTCCTGCAGCCTCTATGTGGCCTGTGTGGAGACTGCGGCCACTCACTCCTTCACCTGCCTCTCGACTATTACTGACCCAGACATTCCCAAGGACTTTGAGGTGACGTCGTGGAACAGCAGCAGCATATCGTTGGCCTGGGACTGCCCTGCGAACTGCAAgttctcctccttccttctcacCGCCTTCTACCTCAATGGCGCAGACCAAATCACAGAGGAGGTGCTCTTGTGGCACAAGGAGGACACCTTTGTGTTCATCCTGTCTGACCTGGAGCCCTGCACCAGGGTTAGGTTTGGCCTGCAGACGGTCTGCCAGGCGGGGATAGAGTCCCGCTACAGCACGATGGTCCTCAACGATGGCAACTCTGTTCACTCCAGCATTGAGGCCTTGCAACAGACATCGTATGGCCACGACAGCTACACCCTGAGCTGGGAGTCCCGGGACACCTCGTCCATCTCCATGTTCAGGGTCTACCACGAGGGGGAGCTGCAGGGCACCACGCTCGTCACCAACTTCACTGTGGGGGGGCTGCTGCCATGCCAACAGCACCAGGCTAAGGTGGAGGCGCTGTGTGGAGACAGTGTGCTCATGAATGCCAAGACAGTTGTGGCACACACAGGACCTCTGGGTGTTTCCGAGCTCAGGTATCACTCCAAAGACTCCACCGCCCAGTGGAAACCCTGCACCACGCACCAGCCCGCTGTGTCCTTTGTATATGAGCTGTCTCTGGAGAACGGCACCACCATCCAGAGCAGCCGGGTGACTGACACAGAGCTGCCTCTGCCAGGGCTGGAGGAagggaagtggaacaaacagtGGAAGACTAAACATTCTCATGTGGGTTTTGAGGGAGATAATTCATCCTTAAAGTTCTTCGTGAGGGCTACTGGATCTTCTCTGGACCAAGAGGTGCAGTTAGATCGTTCCAGCATGGGTCTCACAATGGTCGTGCCCTGGTCACTGCCTGAGGATCTACTGGAGGGCATGTCGGAACCGAGAGCTGAAATGGAGAAGATCTTTCAAGATAAGctacAGGAGATGTTGAATGACTTTCATCAGCGAGCCCACGTTGAGCTGGTTGCAATTGAACCTGCAGGCGagccacacaaaacatacattgTGTTCATGTCTTTTGATGCATCCAAAACTGAGGAAGACATCCCCCTGCCTGTTGAAGATCAGCTGGACTACATTCACTCCCTTAATACAGACCACATGACAGTTACAGATGGGCTCATTTATTGGGAAGGTCCTGATCTGTGTGCTTTCTCCAAACAAACTTTGTGTCCTCTTAACTCTCTGTGCATCAACACCCTGGGCTCCTACGCCTGTTTGTGCCAACATGGCTACTACGATGTGAGCTCTGTCATCGACCCCCCTGTGGCTTCACATCCAATCTGCAATGAAAAAGGACTTTTCAGCCACTGTCTGGATAAACTTATGACTGGTAGTATAGCAAAACCCTACCTGACTTCTCACATCGGGGGAGAGTTAGACGTGAGGCTGAACGATGGCTGGTGCCCTGTGGATGAGACGGAGATGTTCTACTACTTCCGCATCTCACGAAAAGCCTCTGAATGTGGAACTGAGAGGCGGgtgaacaAAACCCACATCCAGTTACAAAACACTCTGACTGTGACCATCAGAGATAAAATCATCACCCGACAGGATCTAAAAGTCGTCTGGAAGTGCATCTACCCGCGCCGTTATGTACGCAACGCTCAAGTCAGTGTGGATGTTGAGTGGCACTCCTCCGCCTCCCTGGTGGCGTTCAACTCCTCCCTGCAGCTAGGCCTGACCATGACCCTGCACGCTGATGAGTCTTACACCGACAGCTACAGGGATGCCATAACCATGGGGCCTGAGGACACTCTGTTCTCCCAGGTGGCCCTGCAGACCAACAACTCCTTTGCTTCAGACGTGCTCCTGCGGGTGGAGTCATGCTGGACCACTGAGAGCCCCGACCACCAGGACACAGTCCAGGGTGTTCTTCTTCAGGATGGCTGTGCTTTTGACCACACGTTCCAGTGGCTCTCTGTAAACGGCCTGGCACAGAACAGCAGATTTTCCATTCAGATGTTCACCATGCCCAAAGGGTTGCCCATCTACATTCATTGCCTGGTCAACATATGTGGACATGATGAAGACTGTACAAAGAATTGCAGCAGCCAGCAGCGCACCAAGCGGTCAGGGAGCCAGATGGACGGAGAGGGGGCCCAAGCTGCTGTAGTGTCTGCTGGACCTCTGGTGGTCAACAGGAGGGGGACGTCAGCTGTCCCACCGTCTTACTGGTCAGAGCATATGACCATGATCCCCATTGTGGCCGGATTAATAGGCTTTCTGGGAGTAACCGTACTCTCAGTGAGTGCAACCAAAGCAATCATGACTTACTATGAGCAACTACGGCTGCAATAAAGTGTTTGGAACACCATCTGTGAGTGTGTAATGATGATCATGGAGACAGTTAA

Function

GO: NA

KEGG:

id description
ko04114 Oocyte meiosis
ko04115 p53 signaling pathway
ko04914 Progesterone-mediated oocyte maturation

RNA

RNA id representative length rna type GC content exon number start site end site
XM_039791088.1 True 3370 mRNA 0.51 20 22896015 22917577
XM_039791089.1 False 3261 mRNA 0.52 20 22892813 22917577

Neighbor

gene id symbol gene type direction distance location
nap1l1 nap1l1,LOC102799271 coding upstream 154797 22715428 ~ 22738016 (+)
osbpl8 osbpl8 coding upstream 217619 22574823 ~ 22675194 (+)
csrp2 csrp2,LOC107383140,LOC107087065 coding upstream 358698 22514966 ~ 22534115 (+)
e2f7 NA coding upstream 386610 22493378 ~ 22506203 (+)
LOC120553804 osgep,LOC102796710 coding upstream 964403 21894940 ~ 21928410 (+)
LOC120553035 NA coding downstream 39127 22956704 ~ 22966965 (+)
LOC120553757 NA coding downstream 103838 23021415 ~ 23048594 (+)
krr1 krr1 coding downstream 275149 23192726 ~ 23206478 (+)
ccdc107 NA coding downstream 372001 23289578 ~ 23299318 (+)
pmpcb pmpcb,LOC106576546 coding downstream 614681 23532258 ~ 23562219 (+)
G229621 NA non-coding upstream 59652 22832950 ~ 22833161 (+)
LOC120553177 NA non-coding upstream 121180 22766101 ~ 22771633 (+)
G229559 NA non-coding upstream 538425 22354115 ~ 22354388 (+)
G229494 NA non-coding upstream 566556 22325795 ~ 22326257 (+)
G229493 NA non-coding upstream 572285 22320266 ~ 22320528 (+)
LOC120553039 NA non-coding downstream 58896 22976473 ~ 22994911 (+)
G229645 NA non-coding downstream 111262 23028839 ~ 23037327 (+)
G229659 NA non-coding downstream 186603 23104180 ~ 23186555 (+)
G229667 NA non-coding downstream 231329 23148906 ~ 23149414 (+)
G229668 NA non-coding downstream 232333 23149910 ~ 23187772 (+)
phlda1 phlda1 other upstream 149634 22739717 ~ 22743179 (+)
G229428 NA other upstream 1024516 21867201 ~ 21868297 (+)
G229422 NA other upstream 1033604 21857983 ~ 21859209 (+)
G229425 NA other upstream 1042212 21849211 ~ 21850601 (+)
G229423 NA other upstream 1045793 21837922 ~ 21847020 (+)
kcnc2 kcnc2,LOC100689973,LOC101475944 other downstream 397844 23315421 ~ 23440663 (+)
adm2a NA other downstream 915441 23833018 ~ 23848624 (+)
LOC120553686 LOC105929833,LOC107382334 other downstream 1016723 23934300 ~ 23945640 (+)
LOC120553083 NA other downstream 1391965 24309542 ~ 24314707 (+)
G230148 LOC102781993,LOC101465723 other downstream 1703235 24620812 ~ 24778258 (+)

Expression


Co-expression Network