LOC120553040


Basic Information

Item Value
gene id LOC120553040
gene name NA
gene type coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053134.1
NCBI id CM020931.1
chromosome length 29109922
location 24597350 ~ 24604947 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>XM_039791095.1
CATAATAATAGTAATTTGACTAAACTCAGTAGTTTTTGGTATATGTATTAACATCACATTTAACTTCACTGACAGAGAACTAAAACATAATAACCATGTTGTTTAATATTTTAACCCCAAGAAATACCGCAAGCAAATAGCTGACTATTTGTTTAATAATGAACCATGTGTTAATTGCAGTAAGAACAGGTGgattcagaaaaacaaaactagCCAGACACTCCTCCGCAGCTCTGTCGACAATTGCCTGGGTGACTAGATTTAGCTCACTCTCTATGATTGAACGTCTgacatgtcatgtcatgtcatgtgcTATGGTGCAGCTGTCGACGAAGACTATGAGGGCCAGAGCTTGTATTAGAATTAAAAGTGACTATAGAACCGTGGTCCTTTTTCTGGTTGTGGCTGTCTTAATCCTTGTGCTACGTAATAAGACTCCCTGCCAGTTTCAGCATGAAGTGAACTCCACCATCATCGTCCCGAGAGTTTCCACTGACCCTGAAGCGCATCGAGGATTCTGTACCCTCCAGCCACTGTCCGCTAACGACGCTCTCGAAGAACACCTCCTACTAGACTCCATTGCTTGGCCTGAAATTCCACTCTTGCCAGCTCTTCTTTCCCTGGAGAATACAAGTGACCCAGCTCACAGCACCTTCACCATTCTCccagggaggggaggaggacagTGGCACGTAGGGGATCAGCTGGAGGTTATAATCAAAATGTCTGATTTCCAGGGCCGTCCTAAGACGTCTGGGGGAGACTTTTTACTCGTCCGGCTGCACAGCCAGAAGCTAGGTGCAGGCGTGGCTGGACAAGTGGTGGATCATCTGAATGGCAGCTACTCTGCTGTATTCTCTTTACTCTGGGAAGGAGACGCGCAGGTTGAGGTGACACTGGTTCACTCCAGCGAGGCTGTTGCAGTGCTGAACAGGCTGACCAGCGAACAGCCTGACAGGATTTACTTTGCGAGCCTCTTCCGCTCAGGCTCAATCTCTGAAACTACCATCTGTAACACTTGCCTACGTCCAACCCAGCAGCCACAGTGCAACTACACTGACCTCCGTACAGGCGAGCCTTGGTTCTGCTACAAGCCAAATAAGCTGAGCTGTGATGCCAGGATCGACCACGCCAAGGGAGGATACATACAAAACATCACGGACATCGAGAAGAAGCTCTTTCAAAGTGGTGTCAACATGAAAGTGTACATTCGTGCTTCAGGACCTGCCAAAGTCACCGTATTGCCAAAAAAGACAGGTCATTCAGAGATGAAGTGCAACAGTGTGAAGTGTGGACCCTCTGGCTATTACTACCAGGGTGCGTGGCGAGCACTAGGTGGCACCACAGTTCAACAATTTAACATCTCTGCCATCAGTCAGTGTCTGAAACGCAAAGTGGTCCACATGTATGGGGACTCCACCATCAGGCAGTGGTTTGAATACCTCAATGCAGCACTACCAGATCTTAAGGAGTTTGACCTGCACAGCTCGAGGCAAGGTGGACCTCTCATGGCCTTAGACAATGCAAACAACATCTTGGTGAAGTTTCGCTGCCACGCTCCTCCTATCCGTTTTGCCAACATCCCAACCAGCGAGCTTCGCTACATTGCTAATGAAATAGATGGCATACCTGGGGGTTACAACACTGTTGTAGTTTTCGGCATCTGGTCTCATTTTAGCACTTTCCCCGTAGAGGTCTACATCCGGCGGCTGCAGAGCATCCGCAGGGCAGTGAAACAGCTGCTGGAAAGGGCTCCGGGCACGGTGGTCATCATCCGGACCGCAAACCCCAAAGCTTTGACGCTTTATGAGACGATAACCAACAGCGACTGGTACTCACTGCAGCGTGATAAGGTGCTCAGAACCATGTTCAAAGAACTAAATGTTCATATAATCGATGCCTGGGAGATGGTCCTTGCCCACCACCTGCCACACAGCCTCCACCCACAACCTCCCATTATTAAGGCTATGATTGACCTTATCATGTCCTACATGTGTCCTCAAAAGGGTGGCtagatgtgtgtttgttgcagcTCCAAGCCATATCCGGGTAGGGCATTACAAATAATCACTGCTGAATGATCACAACTAATACAACCTCATTACATCCCCCGTGTgttgggattgtcaagcagcaCTTTAGGATATGCAGAAAATGGGAATGGTCTGGGGTTCAAATCCTGGACGAGCCCTTCAGATTTGAGTAAAACTTaaagggaggggagagaaaaaCCACAGCTGCAGTATCAAGTGGACATGATATTAAGTCACAATTAGTATCTGGATGTCTCCTCTGGATCAGCAGCATGTCATCTCACCCTGTTGCCGCGACTTGTTGAAAGCATTCTGCCAGAAGTGTGATCACATCTTACTCTGCTGATATTCCCTAAAAGTTGTCTGAGGAGCTGTATTAGGCTACGTACTTTGTACTAACTTTCTCCAAATTGCAATAGTATTATACTGCACGTCTAACTCTGAATATAAGTATTACGCCACTGATCATTTCAGAGTGATCAACACTACCCTATGATACTAGATCTCATCAGCCTTAGACTCTGCCATGTGTATTTTAGACTTTGGGAAAATATGCAAATTTAGTTAAAAATTATCTATTGATCATAATGACCAATTTACATAATTCATTTATGGTTGAAGTAATTTTTCAAGTAACGCTTGAAAAATGTTTCTTGTTCCAGTTTCTTCAGTGAAAGGGCTTTCTCCTTGCACATGTATGGAGATgatgatatatgtgttgtatCTCAGGAAAAGTATTTACAACAAATGAATTAGCGGTGGCAGTGGCCTGTGGCAGGCCCGGTGCTGAGCCAGAGACCCAGCACCGGGCCCGCCACAGGCCACAGCACGCCAGGAAGACTTGGCAAGAGACAGGCGGGGCAGGGCagtgccccccccaccccctgtgTTAGTTCATTTTGATGTTAGTGTTTCAACTTTGGGATGTCTTGCTTTGAGTCGAAGATTGAACCCTGCGGTAGTCGCCCCATTCTGTATCTGGACCTCTCCCAGACCCAACTGGGAGGGAGTTTGTCTGCCGAGGAGTGgcatttaatttagttttctgattgttctttgttttgggatttttattgtttattttacatttatttatataaggggagagggggggagttGGTTCTATTAAACTTGTGTAAAATATGAGTCAGAGCCACTTGATATTCCAGCTGGGGTTTTTCTCTCCACTACCTTTTAGTTTTACTCATcatcttcattttctttttctgtgccCTTTTATGATATCATTGTCAAAATCTGAGGGCTCGTCCAGGATTTGAAACCCAGACCTCTCGCACCCTAAGTGAGAATCATACCCCTTAACCAACGAGCCTACACGTTTAAAAATACGTAATTGTACAAATGTCGGACCAGAAATCAGGTGCTTCAAACTGCTGATGTGGCAGCGTGGGGCTCCACGTTATCTAGTCCAACAGCTCCCTCTGCTGGTCACCATTATATGTTCATCTCACTGTAGATGACATGCAAAACTGTATGACATGGTAATCAGTGGTTGGTTAGTGATcagggccacgttcagccccgacaaaaaGTGGCAACAaggttttttaaactgaaacgggGGTGGGTTTGACACCCTGTTGTGTGTGCAGGCGCTCTGCCTTTTTACTGTATTACCACgggtttacagacacgtctctgctcattgggtatcacctgtgacacacccaccaaacgagagacacacccaccaaacgagagaaaacataaagCTGTTAAACCATGTCGTTCAACACAGAAACTGTAGCCAAACGGTGCACAGAGATTGAGATTGAACTGGGAGCGAATCACACAAATTACAGTTCACACatgtaaggtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgt

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_039791095.1 True 3932 mRNA 0.46 6 24597350 24604947

Neighbor

gene id symbol gene type direction distance location
nopchap1 LOC104942935 coding upstream 26029 24566241 ~ 24571321 (+)
chst11 chst11 coding upstream 118587 24384898 ~ 24478763 (+)
LOC120553464 LOC107381693,LOC105020203 coding upstream 232001 24320276 ~ 24365349 (+)
ift46 LOC107372934 coding upstream 288906 24301765 ~ 24308444 (+)
mkln1 mkln1 coding upstream 347843 24209619 ~ 24249507 (+)
LOC120553385 NA coding downstream 15918 24620865 ~ 24635265 (+)
LOC120553387 NA coding downstream 127249 24732196 ~ 24749828 (+)
LOC120553386 NA coding downstream 168554 24773501 ~ 24788753 (+)
LOC120553142 NA coding downstream 225251 24830198 ~ 24835745 (+)
scube1 scube1 coding downstream 265000 24869947 ~ 24992165 (+)
G230109 NA non-coding upstream 111833 24482310 ~ 24485517 (+)
G230011 NA non-coding upstream 333285 24260059 ~ 24264065 (+)
G229994 NA non-coding upstream 481229 24112965 ~ 24116121 (+)
LOC120553514 NA non-coding upstream 502185 24088025 ~ 24095165 (+)
G229976 net1 non-coding upstream 530361 24065214 ~ 24066989 (+)
G230192 NA non-coding downstream 191006 24795953 ~ 24798741 (+)
G230249 NA non-coding downstream 579865 25184812 ~ 25191943 (+)
G230260 NA non-coding downstream 746930 25351877 ~ 25352174 (+)
G230259 NA non-coding downstream 771400 25376347 ~ 25377601 (+)
G230327 NA non-coding downstream 831204 25436151 ~ 25494355 (+)
LOC120553083 NA other upstream 282643 24309542 ~ 24314707 (+)
LOC120553686 LOC105929833,LOC107382334 other upstream 651710 23934300 ~ 23945640 (+)
adm2a NA other upstream 748726 23833018 ~ 23848624 (+)
kcnc2 kcnc2,LOC100689973,LOC101475944 other upstream 1156687 23315421 ~ 23440663 (+)
phlda1 phlda1 other upstream 1854171 22739717 ~ 22743179 (+)
G230148 LOC102781993,LOC101465723 other downstream 15865 24620812 ~ 24778258 (+)
LOC120553523 NA other downstream 757935 25362882 ~ 25373996 (+)
msrb3 msrb3 other downstream 1036893 25641840 ~ 25662819 (+)
LOC120553706 NA other downstream 1205460 25810407 ~ 25812828 (+)
arhgef39 arhgef39 other downstream 1433241 26038188 ~ 26106823 (+)

Expression


Co-expression Network