zbed4 (zbed4,LOC102794369)


Basic Information

Item Value
gene id zbed4
gene name zbed4,LOC102794369
gene type coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053134.1
NCBI id CM020931.1
chromosome length 29109922
location 17576138 ~ 17583883 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>XM_039791140.1
TTCCTTCCGTCCGACGCTGTGTGGAGCTGCTTCGGCCGAACGTGAACTGCTAGCAGACAAAAGCAACAAAGTGAACCCCCCTCCGGATCAATCAAATGTGTCATATTTAACTGTTTAGGAACCGAAAACCTAGTGATCACACCGTCATACTTCACAGTTGTGTGGGGAGAGGTGGGACTACTTCAGTCATAAATGGAGAGGGACAAGCAGGCACCCTGTGTCCCGGGCAGCCACACACTCATCACAACACCTGCTTGAGCGCTGCAGTGTCGATGACTACACCTGAAAAAACAAATTGCTTTTGACAACGCAGACCTGACTATTCTACAGAAACCCTTGGTCTGCTGCCATGgatggggaggaggaggtgtctCACAAGCGTGAGGATACGGTCAGTGAACCTAATGGCTCCatggaaagtaaaaaaagagagGCCAAAGGGACCTGCCTAAAAATTGAGGGTCAGGATGGCTATGTGTTCAAATCCTACAGCATTAACCCTCATGACACTGTGGATGCAAAGTCCCCTGCTTGTTCCTCGATAACACTGGATAAAGACTCTCCCCCTTCCTCTCCTCAGGATGACAAACCGTTGGAGTCGGACAAAGCAAGTGAGACTGACCCAGCTTCCCCCACCCTTTCAAACAAATGCCTAAACACTGATACGGAGGGAAATACGGAGAATGAAAATTATGAAAATGGAAGCGAAGCAAGTCAACATATCAAAGAGGAGACTGGGGATGCAAACGGAATGGATGAGGATACCCAGGACGATGAAAGGCTAGGATTCGGTAGCTCCGTTGGCCCTTTTGTAACTAGAGACGGTGAGGAGTATAGTAATTTACTAAGTGGATACACAAGCACCCTTTATGATGTTGCCATGGATGCTGTCACTCAGAGCCTTCTGTCATCTATGAGGAGTAACACCAACCCGAGGAAAAAATCTCCTGCGTGGAATCATTTCTGCATATCACCACGAGACAGTACCAAAGCAATCTGTTTATACTGCATGAAAGAGTTCAGCCGGGGTAAGAACGAGAAAGACCTCAGTACAAGTTGTTTAATGAGGCACGTACGAAGGGCTCACCCCACTGTGCTTTTACAAGACGGAGCAGACGCATCCTCAAACAATCTGACTAGCTCCCTCGCCTCATCTTTGATACCTCCATCCCCAAACTCACCAAAAAACGGAGACTTGACCAACAGCGTCATTTCTTCTGCCTCAAAGAACACTTCACCGTCCACCTCCTCAGCTGAAAATTCAGATCTTGCATCCAAAGAAGTGTTACCCAAAGTTGAACCAAAACTAGAACTGTATGCCAACACTGAGGCCGTTTGCAGCACGCTCTCCTCCTCACATTCCAATGACAACAACCTTGAAGATATGTCAGACGGTGGGCCTGAGCGCCTCCCTGGGACCCCAAAAAGCTCAAGTTCCCGTCGGAGGTCCGCTGTATGGAAACACTTCTACCTGTCACCTGCTGACAATTCCAAAGCAGTATGTATCCATTGCATGAATGAATTCAGCAGGGGTAAAAATGGGAAGGATCTAGGGACGAGCTGTCTTATTCGCCATATGTGGAGGGCCCACAAAGAGGTTGTCATTGAGGAAAATGGACAGGGCAATCACATTCCCCCACCCTATACAAACCCGCCTTCACTACTGTCCCGCACTCATCTACACGATCCACTGGAAGTAAAAAAAGAATCGCCCCTTCTTCCATCCTCACCAGAAACCATATCAGATGAGTTACCCCAAAGCATGGGGGAAAGCATGGATATAAAAGAGGAATCTGATGAGGTGATGCATCTCTCAGGGCAGGAATCCTCTCTCAATCTCTCCTTCAAAACCCAGGGGGAGGATACACCTCTAACTTCCTCGCCATGCGACCTCTCTGAGGGCCCCAGCCTCAACCAGGATCATTCAGTTTTCCAGCAAAACAAGAAGATCATGAAACGGGTGAAATCGGAAGTGTGGCACCATTTCATAGTGTCCCCAGTGGACCAGTTGAAAGCACTGTGCCGTTACTGTCCGTGTGTCATCAGTCGAGGGAAACGCGGCGACTTTGGTACAAGCTGCCTGATGAGGCATCTGATGAGACGCCACCCAGACGTCCTCAAAAACCAAAAAAGCACAGATGAGAAGGAATCCTCCCCTCATCCTTACACCAATCTCGCCGCAACGGACGCAGTTTCAACCAAAGAAACTGAGAGCCCTGCCAGCGAGAAAAAGCCCCAAACACTGCCCGTTTTCAGTAAAAAGACGTCAAAACTGTGGAACCATTTCTCCATTTCGCCCACTGACCCCACAAAGGTGGTTTGTTTGCACTGTGGCCGCACAATTAGCAGAGGCAAAAAGACTACAAACCTTGGCACAAGCTGCCTCTTCAGGCACATGCAGAGGTTTCATGGACATGTTCTTGAAAGTAACAATACTATCTCAGGTGATGTGCCGTCTGCTGAAATTCACGTTAAGCAAGAGCTCATGGACACTTCCGTTTATGAAACGGAACAGAGCCGTGAGAGGTTTGATGAACGCCACCCGGTTGCCAAAAGAATCACCAAACTACTCGCAGAAATGCTCGCACTGGATCTTCAGCCATCAGCTATGGTGGAGAATGCTGGACTCAACAGACTGCTAGAGTACCTCCAGCCTCAGTATTCTCTACCACCTTCTTCCTACTTTACCAGCACTGCCATACCAGACATGTACGAACGGGTGAAGGACGTTGTGCTGACCCACCTGAAAGAGGCTGAAGGTGGCGTTGTCCACTTCACAACGAGTATTTGGGTCAGCAGCCAGACAAGGGAATACCTGACCCTCACTGCCCACTGGGCAACGTACGAGTCAAGTGTCAGGCCCCAGGGTCAGGACTTCCACTGCTCTGCTCTCCTAAGTGTCTCGCAAATAGACTGTGATCATGATATGCATGACATCCCAAAGCAGCTGGAGTATCTGTGGGATTCCTGGATCACGTCATCAGGGCTGAAAAAGGGGTTCACTGTGACAGATAACACCACCATCAGAAACACTTTGGAGGACCACGGCCATGTCACCATGCAGTGTTTTGGACACACTATAGACCTCATTGTTAGCGAAGCCATAAAGAGCCAGAGAATGGTTCAGAACCTTCTGAGTATCGCACGCAAGATCTGTGAACGCGTGCACCGCTCGGCAAAGGCCAAGGAGAAGCTGGCCGAGCTCCAGAGGGTGCACCAGCTGCCCGAGAACCAACTCATTCAGGACGTTCCTTCCAAATGGAGGACCTCCTTTTTCATGCTGGAGCGGCTGGTGGAACAGAAGAAGGCCATCGACGAGATGTCGATCGAGTGCAATTTCAGGGAAATGATCAGCTGCGATCAGTGGGAGGTGATGCTGTCGGTCTGCAATGCACTGAAACCGTTCGAAGTCGCCTGCAGGGAGATGAGCAACCGCACTGCCACTCTGGGACAAGTGATACCACTCATTCACATCCTCAACAGAAAGATAGACCTGCTGTTTGATGAAACCGTGGGCATAGACAACATGCTCAAGTCCCTAAAGGAAGCCATGGTGAGCAAAATGTCGGCCACTCTGCACGACCCGCGAAACACCTGGGCGACCATGCTGGACCCACGATACAAGACGTCGCTGTTCACCGAGGAAGAAGCCGAGCAATGCAAACACGATCTGATCCGGGAGCTGGACTTGTCCTCGACCGCCTCCGTCGAAGCTCAGCCTCCGCTGCCCAATGGCTGCAACGAGACCCCCCTGTCGTCCAACGCCTCCCACCCAAACGAGGACAACCTCTGGTCCCTTATGGCCGACATCAGACAAAAGATAAAACACGAGGAGAAGCCAAAGTCCTCAGAGCTGGCAGTGCTGGAGTACCTCGAGGAAGACATACTTGATCAAAGCTGTGACCCCCTCGACTATTGGAACCTGAAAAAGTTCCTGTGGCCCGATCTTGCCAAAGTAGCCGCCCGTTACGTGGGCTGCCCTCCCAGCATCGTCCCAGCAGAGACACTGTTCAGCACAGCTAGTGTCAACTGTGCCCTAAATCAGCCCAGGCCTTTACTGGAAAACATGGAGGGTCTACTGTTCCTCAAAGTCAACCTCCCTTTGATTTATTTTCAGTACTGATTATTGCTGAGCATTAACTTAAACCCTTTATCAAGGACCAAGTTGCATAGCTGTGAAATGGGGGTTTCTGTTGggcaaaatgtaaaatattgatttataCACTGATTCTCACTGCAAAGGCCGGATTTggaggttttattttattctgtgtACTACTGTTAAAACACTTGGAGCTGTTGTGATGAAAAGTCTCAGTCAAAAGTGTATCAGGGAGGGAGGGTTTTTCTAGCTGTAGGGGTTGGTGATAATGTCGTTTGCTTGtaaatcaatgtttttgttttctgtgtctACTCTCTCCTTGTGCCTTATTCAGAACTACTTCAGGTCAAAATGCTGTAAATATTTAGTTAAATTGCGCAGATCACGTCAGGATGCTTTTTGATTATTGTGTATTAAAGATGGACAGAGTTGTTTTCGGAATGATGGCCCAGAAATAAATGCTGTGACTGAAAGATGTTTTAAGTTAATGTTATTTAATTTTCATTGTGAATTTGTGGCTCATGGTACTGTCATTTagatagacttttttttttttttacttgctgaaatgtttttaataagATCATGTATAATATTGCTGTATTTTCAGAATAAGCAGTTTGTTTGGAATATACAATTTGTCTCTTAAGCACAATTTAAGTTTATGTCCAGGGGATTAAATTATGGGTTTATTATTGAGTAAAAcgatgtactgtacatttttatattaaatgacTTCTGAACCTAATTTGATAAATGTTTTAGCATTGAGACTGGACCCATGCAAATGTTGTGgtcatttttaaataaaggttttccTTATGCAATATCTAA
>XM_039791141.1
TTCCTTCCGTCCGACGCTGTGTGGAGCTGCTTCGGCCGAACGTGAACTGCTAGCAGACAAAAGCAACAAAGTGAACCCCCCTCCGGATCAATCAAATGTGTCATATTTAACTGTTTAGGAACCGAAAACCTAGTGATCACACCGTCATACTTCACAGTTGTGTGGGGAGAGGTGGGACTACTTCAGTCATAAATGGAGAGGGACAAGCAGGCACCCTGTGTCCCGGGCAGCCACACACTCATCACAACACCTGCTTGAGCGCTGCAGTGTCGATGACTACACCTGAAAAAACAAATTGCTTTTGACAACGCAGACCTGACTATTCTACAGAAACCCTTGGTCTGCTGCCATGgatggggaggaggaggtgtctCACAAGCGTGAGGATACGGATGACAAACCGTTGGAGTCGGACAAAGCAAGTGAGACTGACCCAGCTTCCCCCACCCTTTCAAACAAATGCCTAAACACTGATACGGAGGGAAATACGGAGAATGAAAATTATGAAAATGGAAGCGAAGCAAGTCAACATATCAAAGAGGAGACTGGGGATGCAAACGGAATGGATGAGGATACCCAGGACGATGAAAGGCTAGGATTCGGTAGCTCCGTTGGCCCTTTTGTAACTAGAGACGGTGAGGAGTATAGTAATTTACTAAGTGGATACACAAGCACCCTTTATGATGTTGCCATGGATGCTGTCACTCAGAGCCTTCTGTCATCTATGAGGAGTAACACCAACCCGAGGAAAAAATCTCCTGCGTGGAATCATTTCTGCATATCACCACGAGACAGTACCAAAGCAATCTGTTTATACTGCATGAAAGAGTTCAGCCGGGGTAAGAACGAGAAAGACCTCAGTACAAGTTGTTTAATGAGGCACGTACGAAGGGCTCACCCCACTGTGCTTTTACAAGACGGAGCAGACGCATCCTCAAACAATCTGACTAGCTCCCTCGCCTCATCTTTGATACCTCCATCCCCAAACTCACCAAAAAACGGAGACTTGACCAACAGCGTCATTTCTTCTGCCTCAAAGAACACTTCACCGTCCACCTCCTCAGCTGAAAATTCAGATCTTGCATCCAAAGAAGTGTTACCCAAAGTTGAACCAAAACTAGAACTGTATGCCAACACTGAGGCCGTTTGCAGCACGCTCTCCTCCTCACATTCCAATGACAACAACCTTGAAGATATGTCAGACGGTGGGCCTGAGCGCCTCCCTGGGACCCCAAAAAGCTCAAGTTCCCGTCGGAGGTCCGCTGTATGGAAACACTTCTACCTGTCACCTGCTGACAATTCCAAAGCAGTATGTATCCATTGCATGAATGAATTCAGCAGGGGTAAAAATGGGAAGGATCTAGGGACGAGCTGTCTTATTCGCCATATGTGGAGGGCCCACAAAGAGGTTGTCATTGAGGAAAATGGACAGGGCAATCACATTCCCCCACCCTATACAAACCCGCCTTCACTACTGTCCCGCACTCATCTACACGATCCACTGGAAGTAAAAAAAGAATCGCCCCTTCTTCCATCCTCACCAGAAACCATATCAGATGAGTTACCCCAAAGCATGGGGGAAAGCATGGATATAAAAGAGGAATCTGATGAGGTGATGCATCTCTCAGGGCAGGAATCCTCTCTCAATCTCTCCTTCAAAACCCAGGGGGAGGATACACCTCTAACTTCCTCGCCATGCGACCTCTCTGAGGGCCCCAGCCTCAACCAGGATCATTCAGTTTTCCAGCAAAACAAGAAGATCATGAAACGGGTGAAATCGGAAGTGTGGCACCATTTCATAGTGTCCCCAGTGGACCAGTTGAAAGCACTGTGCCGTTACTGTCCGTGTGTCATCAGTCGAGGGAAACGCGGCGACTTTGGTACAAGCTGCCTGATGAGGCATCTGATGAGACGCCACCCAGACGTCCTCAAAAACCAAAAAAGCACAGATGAGAAGGAATCCTCCCCTCATCCTTACACCAATCTCGCCGCAACGGACGCAGTTTCAACCAAAGAAACTGAGAGCCCTGCCAGCGAGAAAAAGCCCCAAACACTGCCCGTTTTCAGTAAAAAGACGTCAAAACTGTGGAACCATTTCTCCATTTCGCCCACTGACCCCACAAAGGTGGTTTGTTTGCACTGTGGCCGCACAATTAGCAGAGGCAAAAAGACTACAAACCTTGGCACAAGCTGCCTCTTCAGGCACATGCAGAGGTTTCATGGACATGTTCTTGAAAGTAACAATACTATCTCAGGTGATGTGCCGTCTGCTGAAATTCACGTTAAGCAAGAGCTCATGGACACTTCCGTTTATGAAACGGAACAGAGCCGTGAGAGGTTTGATGAACGCCACCCGGTTGCCAAAAGAATCACCAAACTACTCGCAGAAATGCTCGCACTGGATCTTCAGCCATCAGCTATGGTGGAGAATGCTGGACTCAACAGACTGCTAGAGTACCTCCAGCCTCAGTATTCTCTACCACCTTCTTCCTACTTTACCAGCACTGCCATACCAGACATGTACGAACGGGTGAAGGACGTTGTGCTGACCCACCTGAAAGAGGCTGAAGGTGGCGTTGTCCACTTCACAACGAGTATTTGGGTCAGCAGCCAGACAAGGGAATACCTGACCCTCACTGCCCACTGGGCAACGTACGAGTCAAGTGTCAGGCCCCAGGGTCAGGACTTCCACTGCTCTGCTCTCCTAAGTGTCTCGCAAATAGACTGTGATCATGATATGCATGACATCCCAAAGCAGCTGGAGTATCTGTGGGATTCCTGGATCACGTCATCAGGGCTGAAAAAGGGGTTCACTGTGACAGATAACACCACCATCAGAAACACTTTGGAGGACCACGGCCATGTCACCATGCAGTGTTTTGGACACACTATAGACCTCATTGTTAGCGAAGCCATAAAGAGCCAGAGAATGGTTCAGAACCTTCTGAGTATCGCACGCAAGATCTGTGAACGCGTGCACCGCTCGGCAAAGGCCAAGGAGAAGCTGGCCGAGCTCCAGAGGGTGCACCAGCTGCCCGAGAACCAACTCATTCAGGACGTTCCTTCCAAATGGAGGACCTCCTTTTTCATGCTGGAGCGGCTGGTGGAACAGAAGAAGGCCATCGACGAGATGTCGATCGAGTGCAATTTCAGGGAAATGATCAGCTGCGATCAGTGGGAGGTGATGCTGTCGGTCTGCAATGCACTGAAACCGTTCGAAGTCGCCTGCAGGGAGATGAGCAACCGCACTGCCACTCTGGGACAAGTGATACCACTCATTCACATCCTCAACAGAAAGATAGACCTGCTGTTTGATGAAACCGTGGGCATAGACAACATGCTCAAGTCCCTAAAGGAAGCCATGGTGAGCAAAATGTCGGCCACTCTGCACGACCCGCGAAACACCTGGGCGACCATGCTGGACCCACGATACAAGACGTCGCTGTTCACCGAGGAAGAAGCCGAGCAATGCAAACACGATCTGATCCGGGAGCTGGACTTGTCCTCGACCGCCTCCGTCGAAGCTCAGCCTCCGCTGCCCAATGGCTGCAACGAGACCCCCCTGTCGTCCAACGCCTCCCACCCAAACGAGGACAACCTCTGGTCCCTTATGGCCGACATCAGACAAAAGATAAAACACGAGGAGAAGCCAAAGTCCTCAGAGCTGGCAGTGCTGGAGTACCTCGAGGAAGACATACTTGATCAAAGCTGTGACCCCCTCGACTATTGGAACCTGAAAAAGTTCCTGTGGCCCGATCTTGCCAAAGTAGCCGCCCGTTACGTGGGCTGCCCTCCCAGCATCGTCCCAGCAGAGACACTGTTCAGCACAGCTAGTGTCAACTGTGCCCTAAATCAGCCCAGGCCTTTACTGGAAAACATGGAGGGTCTACTGTTCCTCAAAGTCAACCTCCCTTTGATTTATTTTCAGTACTGATTATTGCTGAGCATTAACTTAAACCCTTTATCAAGGACCAAGTTGCATAGCTGTGAAATGGGGGTTTCTGTTGggcaaaatgtaaaatattgatttataCACTGATTCTCACTGCAAAGGCCGGATTTggaggttttattttattctgtgtACTACTGTTAAAACACTTGGAGCTGTTGTGATGAAAAGTCTCAGTCAAAAGTGTATCAGGGAGGGAGGGTTTTTCTAGCTGTAGGGGTTGGTGATAATGTCGTTTGCTTGtaaatcaatgtttttgttttctgtgtctACTCTCTCCTTGTGCCTTATTCAGAACTACTTCAGGTCAAAATGCTGTAAATATTTAGTTAAATTGCGCAGATCACGTCAGGATGCTTTTTGATTATTGTGTATTAAAGATGGACAGAGTTGTTTTCGGAATGATGGCCCAGAAATAAATGCTGTGACTGAAAGATGTTTTAAGTTAATGTTATTTAATTTTCATTGTGAATTTGTGGCTCATGGTACTGTCATTTagatagacttttttttttttttacttgctgaaatgtttttaataagATCATGTATAATATTGCTGTATTTTCAGAATAAGCAGTTTGTTTGGAATATACAATTTGTCTCTTAAGCACAATTTAAGTTTATGTCCAGGGGATTAAATTATGGGTTTATTATTGAGTAAAAcgatgtactgtacatttttatattaaatgacTTCTGAACCTAATTTGATAAATGTTTTAGCATTGAGACTGGACCCATGCAAATGTTGTGgtcatttttaaataaaggttttccTTATGCAATATCTAA

Function

symbol description
zbed4 Predicted to enable DNA binding activity; metal ion binding activity; and protein dimerization activity. Predicted to be located in nucleus. Orthologous to human ZBED4 (zinc finger BED-type containing 4).

NR:

description
zinc finger BED domain-containing protein 4

GO:

id name namespace
GO:0003677 DNA binding molecular_function
GO:0046983 protein dimerization activity molecular_function

KEGG:

id description
K24640 ZBED4; zinc finger BED domain-containing protein 4

RNA

RNA id representative length rna type GC content exon number start site end site
XM_039791140.1 True 4936 mRNA 0.47 2 17576138 17583883
XM_039791141.1 False 4747 mRNA 0.47 3 17576138 17583883

Neighbor

gene id symbol gene type direction distance location
creld2 creld2 coding downstream 5490 17565571 ~ 17570648 (-)
LOC120553454 LOC104933464,LOC108241015,LOC102202158 coding downstream 244760 17306223 ~ 17331378 (-)
trim24 LOC103366983 coding downstream 341445 17222334 ~ 17234693 (-)
LOC120553673 NA coding downstream 355781 17208626 ~ 17220357 (-)
atxn10 atxn10 coding downstream 368684 17196941 ~ 17207454 (-)
tbc1d22a tbc1d22a,LOC106927306,LOC103356476 coding upstream 550201 18134084 ~ 18270751 (-)
celsr1a NA coding upstream 845224 18429107 ~ 18523877 (-)
trmu trmu,LOC102792203 coding upstream 941053 18524936 ~ 18530092 (-)
tprkb tprkb coding upstream 949755 18533638 ~ 18535642 (-)
LOC120553458 cpne8,LOC104935575,LOC103365370,LOC101074159 coding upstream 977213 18561096 ~ 18652690 (-)
LOC120552976 NA non-coding downstream 173306 17402248 ~ 17402832 (-)
G228474 NA non-coding downstream 300661 17272948 ~ 17275477 (-)
G228439 kdm5a non-coding downstream 332158 17243465 ~ 17243980 (-)
G228423 NA non-coding downstream 353910 17221205 ~ 17222228 (-)
G228401 NA non-coding downstream 437863 17137270 ~ 17138275 (-)
LOC120553191 NA non-coding upstream 720702 18304585 ~ 18346997 (-)
G228684 NA non-coding upstream 972170 18556053 ~ 18558509 (-)
G228683 NA non-coding upstream 974718 18558601 ~ 18559279 (-)
G228713 NA non-coding upstream 1297278 18881161 ~ 18884075 (-)
G228731 NA non-coding upstream 1309757 18893640 ~ 18975820 (-)
G228465 NA other downstream 273940 17295122 ~ 17302198 (-)
slc37a3 slc37a3 other downstream 555403 17007724 ~ 17020735 (-)
G228291 LOC103356441,LOC102298269,LOC102212027 other downstream 752706 16748842 ~ 16823432 (-)
G228191 NA other downstream 1784285 15771238 ~ 15791853 (-)
znf800b znf800,LOC103364713,LOC103355189,LOC108412280 other downstream 2486155 15055475 ~ 15089983 (-)
tafa5a fam19a5,LOC103356475,LOC102793695 other upstream 246733 17830616 ~ 18100995 (-)
gramd4a gramd4,LOC103376144 other upstream 779376 18363259 ~ 18421407 (-)
LOC120553633 slc2a13,LOC103369283 other upstream 1154513 18738396 ~ 18823090 (-)
sox5 sox5 other upstream 1444726 19028609 ~ 19270336 (-)
G228934 fam19a2,LOC103364248 other upstream 2149219 19733102 ~ 19807098 (-)

Expression


Co-expression Network