LOC120553073


Basic Information

Item Value
gene id LOC120553073
gene name NA
gene type coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053134.1
NCBI id CM020931.1
chromosome length 29109922
location 20537056 ~ 20544945 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>XM_039791147.1
AAAAGAATGTATTTTACTTgtacatatctatctatctatctaattgcatgctgtatatatgtaaagtttgaatatatggaatgaaaagaaaatgtaatctatatatgttataaaaaaggcCCATAAATAATTAACTGCAGCTACTAAGATTTGTAATGCCGAGTGCATGACCGATTTCTGCTCTAATCCCTCTGGTATAGTGTAGAAATAACTTCAATAGGGGCTGTATTTCTTGATACAGGTTCACAACTCCCACCCATTTCGCTTACCTTTGTATGGTaccatttcattttctcaacAAGACCATTGGTTTGAGGATGATAAGGGGCACAAAGGCTTCTTTATATCCCAAGGAATCAGTGTTGATCTGAAATACATTTATCTCACTTTACAAATGGTGAATTTTCAAGGGACTGATGGTATTTTATTTTGCCCCCACAAATTATTGTTGGTAGCTACATTGCAAGTAGGTTTATTTTACCTGATTTACAAAATCCTTCCCCTGGTCTGTAAGGATCCTCTTGGGAGCCTcaaactggtaaaaaaaaaaacaatttgaggATGCAGCCAGATACCTCTTTAGCCGTTTTTTGTTCTAAGAGGGTAAGCTTGTGCCCATTTGGTCAGGTAATCAATCATTACACAGATGTAACTGTATCCCTCTGTAGTCACAGTCAGCTTCCCTATCAGGTCCATGCCAACAAGCTCAAATGGATGCGTCACCTAAAAGACATATAGGTGACTGTCAGGTGAACATCAAGAACAAGGAATAGGACATGACTGGACAAGTGAGATAAGTGGGATAAACGACAGCAAGGGGAAAGACAGACCAAGGGGAAAATACCAAAAAGACACTAGACAGATGGGCGAGGTGAATAAATCAGGAAAtataaaggattttttttttcttacagtgaTTGGTGTGTCCTCCTTGATTTGAGCTCCACTGGCCTGGCAGTGCACACACTGGGCCACCTGAATGAAGAAGATttaaaaacacagagagacagaccgtttttaacagttttattcAACAAGTATTTCAAAGATGTTTGGAGAAAGCAACTTGCGGCCAAGTCACCGCACGTATGATATAGGTGACGAGGATCCTCTCATTGAAGAGCTCAGCAAAGCAATGGCCAGACTTTCTGTAAGTGGACCGACTGAGCTAGCGTCCAGGTCCTCCAACAGCCGCATATCCAATAATAGGGGGTCCACCGAAACCAAAGAGGCCCAAGTTACCGGTCGCTCCAGGGCCGTTGAAGGGAGGATTCCACCTGAGACCAAAGACAACATCAGTACCCCTTATGATATAGGTGACGAGGATCCTCTCATTGAAGAGCTCAGCAAAGCAATGGCCAGGCTTTCTGTAAGTGGACCGACTGAGCTAGCGTCCAGGTCCTCCAACAGCCGCATATCCAATAATAGGGGGTCCACCGAAACCAAAGAGGCCCAAGTTACCGGTCGCTCCAGGGCCGTTGAAGGGAGGATTCCACCTGAGACCAAAGACAACATCAGTACCCCTGTGAGGACAATCCAGTACCCCTGTGAGGCCATTCCAAAACCTTCCCCTAAAAGGGGATTGGAGGATCTGGAATCGGCCAGTATCGGAAGGCCAGACAGCCTCGGtccagagaggaagaggagaagagtggACACAGCGACAAGAAGGAAGGCTTCCTGGGTGAGTGTTCACGCCAGAGCTTTTCGAAGGAACTATATTAGTGCCGTTTGTTCCAAGGCCATTCAAGAGAAATCGGTGAGGGTCAAGCAGACTTTGCCACGTGAGGTGGAAGAGCAGACTGTAACAGAAGGCTTGACGGGCACAGAAAAACCCTCCCATAAAAGGAAATGGGAAGATTTCAAATCAGCCGGTATCAGAAGGCCAGACAGCCTCGGtccagagaggaagaggagaagagtggACACAGCGGCAAGAAAGAAGGCTTCCTGGGTGAGTGTTCACGCCAGAGCTTTTCGAAGGAACTATATTAGTGCCGTTTGTTCCAAGGCCATTCAAGAGAAGTCGGTGAGGGTCAAGCAGACTTTGCCACGTGAGGTGGAAAAGCAGACTGTAACAGAAGGCTTGACGGGCACAGAAAAACCCTCCCATAAAAGGAAATGGGAAGATTTCAAATCAGCCGGTATCAGAAGGCCAGACAGCCTCGGtccagagaggaagaggagaagagtggACACAGCGACAAGAAGGAAGGCTTCCTGGGTGAGTGTTCACGAACACGTTCGGGCAGACGGTGACGTTGTTATGGTTGCCATGCCAAAAAAGACAACTACAACCAGAAGGAATAACATGAGACGCTGTGCGAAGGGACGTGGAGAAAAGACCTGGAGAGGAGGGAGCAAGAAGACAAAGCATGACGTGAGgTCATGCTTTGACAAAAGGGGAAACACTGGACCAAAAAAACCCAGCACCCCACTTTACCGTCTGAGACCCTTTCACCAAAGAAAGCAATATGGACCACCAGGCAGAAGAAACCCACAAAACATGCGTTTGCAGGGCCGCCGTCAGTGGGCAACACCAGGACCGATGTGCCGGGCCCCGGGTCGGGGGAGGGCCCAAAGTGTCCCTTGGCCAAACAAGTCCTGGGCACGAGGAAGACACACGGACCTGTGTGTCACTGTCACTTTCTAAAtcaatgaaataaatgtaattttttgtcTTCCTA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_039791147.1 True 2687 mRNA 0.46 8 20537056 20544945

Neighbor

gene id symbol gene type direction distance location
camk1da camk1d coding downstream 6312 20455675 ~ 20530744 (-)
optn optn coding downstream 106560 20410195 ~ 20430496 (-)
mcm10 mcm10,LOC102783079 coding downstream 127380 20394066 ~ 20409676 (-)
hcfc2 hcfc2 coding downstream 250469 20272526 ~ 20286587 (-)
cep83 cep83 coding downstream 264912 20260025 ~ 20272144 (-)
cdc123 cdc123 coding upstream 5089 20550034 ~ 20564985 (-)
il15ra NA coding upstream 75600 20620545 ~ 20640722 (-)
ano2b ano2,LOC103459666,LOC108245555,LOC102202227 coding upstream 380228 20925173 ~ 21008235 (-)
pik3cg pik3cg coding upstream 477390 21022335 ~ 21046386 (-)
slc13a4 slc13a4 coding upstream 608256 21153201 ~ 21183856 (-)
G229096 NA non-coding downstream 255 20536573 ~ 20536801 (-)
G229095 NA non-coding downstream 1459 20535285 ~ 20535597 (-)
G229079 NA non-coding downstream 86928 20442320 ~ 20450128 (-)
G229076 ccdc3,LOC102778083 non-coding downstream 99520 20434155 ~ 20437536 (-)
G229071 NA non-coding downstream 145548 20382465 ~ 20391508 (-)
G229099 NA non-coding upstream 1948 20546893 ~ 20547497 (-)
G229109 NA non-coding upstream 4553 20549498 ~ 20549724 (-)
G229140 NA non-coding upstream 81134 20626079 ~ 20627508 (-)
G229154 NA non-coding upstream 123713 20668658 ~ 20668886 (-)
G229162 pfkfb3 non-coding upstream 136147 20681092 ~ 20683865 (-)
cdk17 LOC104930593 other downstream 182429 20301092 ~ 20354627 (-)
rerg rerg other downstream 414663 20066895 ~ 20122393 (-)
etv6 etv6 other downstream 697706 19806814 ~ 19839350 (-)
G228934 fam19a2,LOC103364248 other downstream 729958 19733102 ~ 19807098 (-)
sox5 sox5 other downstream 1266720 19028609 ~ 19270336 (-)
G229199 NA other upstream 412712 20957657 ~ 20958220 (-)
ptprz1b NA other upstream 518746 21063691 ~ 21145533 (-)
slc38a2 slc38a2 other upstream 916131 21461076 ~ 21474602 (-)
LOC120553090 NA other upstream 1226143 21771088 ~ 21811097 (-)
G229716 NA other upstream 2559815 23104760 ~ 23239573 (-)

Expression


Co-expression Network