ucn3l (LOC103371858,LOC106936223,LOC103146475,LOC103460978)


Basic Information

Item Value
gene id ucn3l
gene name LOC103371858,LOC106936223,LOC103146475,LOC103460978
gene type coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053134.1
NCBI id CM020931.1
chromosome length 29109922
location 12327666 ~ 12329999 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>XM_039791189.1
AGTTTGATGGCTCCTACTAAATGAATGCAGTGGGAATGGATGAGGAAGACACACTGCTGGTCAGACAGTGCGCACGGCTGACCTCCGCACACATTATCAGTTTATAAGGATTTTATCATCACATTTTTACTTCAGAGAATTTCTGTCTGTTTGGTTTTTCTTTGCAGGGATACGTGTTGGGTGATCTCCCTAACTGTATTTGTTATTGTAGGACACGAGTGTGGACACAGCATGCTGTCGTCCCTGAAGACCCTGCTGCTGCTCTCGGTCCTGTGCACGCCGACCTCCAGCCTGTGCCTCCGCCTCTACAACTCCCGCTCCGACCTGCTGTGCGACGACCAGATGGCCGTCGGGGTCCGGAGCGAGGAGGACGAGCCGGGTTACTCCCCCGTGGGCGGCTGGGGGTCCCTGCTGCAGTCCGCGGAGTATCTCTCCTCATCCTCCACCTCTTCTTCTGCAGAGTCCAGCCGGGAAAAAAGGACTTCAAGTCCCGCAAACTACCGCTTCATGAGCCGGACGAAGCTCAGAGGGCTGATGGCCCGCAACAGCAGCAAAGGGGACCGGAGGAGCAGGCTGACCCTGTCCCTGGACGTCCCGACCAACATCATGAACGTCCTCTTTGATGTCGCCAAGGCCAAAAAGATGCGAGCCAAGGCGGCGGAGAACGCGCTCCTGCTGGCTAAGATTGGAAGGAGAAAGTGAACATGTTGAACAACTTAGATCTTAACAGCCATGACCCGTGTTGGCCTCCACCGTTACTCAAATGTAATGAATTCTTATTCACTAGTGGGCTACTCCTTTTGATTTGTTGCTCCAGGggaatattgttttatttcaaatcACGTTACAGGTAAAATAAGcatttataatataattaagTTGCTCTCATGTGAAAGGTTCTTAGAAAGTCTcttatctattattattattattattattattattattattattatttttgtatttgcttCAATAAAAATACTGGGGAAACTTGGGACAATGCATGATGTAAACGTATGAAGCTTTTTGACTAAAAGTTGGATGATGAttttagattgttttttttgtagtaCAACTCAGCTTCATGATTCAGCTTCACAAATTGATTTTCTCTTAAGTTAACTTTTAAAGTTTGTTATGTTAGAGTTTTGATTGAAATCATGCCTTTGTGGTGAGAATGATCCATGTGTTTCTTATCAGAAATGTTGTAGCAACATCTTAAATCAAGACATAATAAGGTCAAAAGCAATGAAGACAAAGTTATTTTACTTGTACCAAGATGATTGGTCATTTCAGGCATGAAAATGTGAGACATGTTTTGCATTGGAAACAGTTGAAATTGTGTCACACTTTGCTCCCTTCCAATCTGAAAAGAAGATGTTGAGATTCATGGACTTTTACATTTTCACTTCAAGCAGGACAGCCCTTCGATTTTCTTTATCCGTAAAATGAATGTTTAATGTGGTTAGTTTGCCCCAGagtcatacatttttaaatgttggaCTAAACAAGAAGAACAAAGCAGTAGAGGTCATCAAATCTTATGTCGTTAGGAAAAGACCAATGAAAGGTTTTGTAATTATGTTGCATAATCATAACATTTgatattattatgtttttttttctctttgctgCTATATTTATTTAGGGGCTTTGCTGTTTAGAAGTTCACATGGAAGCCGATAATGATTTCAGATTGTAATGTgaaacatcaacaaaaacacaacactgaaCACTGATTCTGAAATATTGTACAACCAACTGTAAGATCATGAAATACAGTAAAATGCAAGTGCATGAGAATGTATGTGTTCATCAGATGTCTGTTATTTTTATACTCAAAATAAAGGATTATTTTTCCTCAAATAAAGCAGATGTAAATAA

Function

NR:

description
PREDICTED: urocortin-3-like

GO:

id name namespace
GO:0006950 response to stress biological_process
GO:0007586 digestion biological_process
GO:0005615 extracellular space cellular_component
GO:0051431 corticotropin-releasing hormone receptor 2 binding molecular_function

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_039791189.1 True 1884 mRNA 0.40 2 12327666 12329999

Neighbor

gene id symbol gene type direction distance location
copg2 copg2 coding downstream 1896 12316147 ~ 12325770 (-)
LOC120553762 LOC103374597,LOC102209562,LOC104923710,LOC101480655,LOC100694855 coding downstream 229361 12093538 ~ 12098305 (-)
iqsec3a iqsec3,LOC102789444,LOC102305902 coding downstream 243876 11981998 ~ 12083790 (-)
LOC120553245 parp11,LOC103365400,LOC100707536,LOC107085973,LOC102790985,LOC101482593,LOC104955166 coding downstream 384427 11936414 ~ 11943239 (-)
LOC120553247 NA coding downstream 391299 11934128 ~ 11936367 (-)
si:dkey-117n7.5 LOC103382769,LOC107385417 coding upstream 3945 12333944 ~ 12349260 (-)
col7a1l LOC103371861,LOC108235101,LOC106515058 coding upstream 23645 12353644 ~ 12412870 (-)
lrguk NA coding upstream 85815 12415814 ~ 12433137 (-)
exoc4 exoc4 coding upstream 103897 12433896 ~ 12554663 (-)
zc3hc1 zc3hc1 coding upstream 737414 13067413 ~ 13075321 (-)
G227407 NA non-coding downstream 358188 11966652 ~ 11969478 (-)
LOC120553250 NA non-coding downstream 378465 11944330 ~ 11949201 (-)
LOC120553249 NA non-coding downstream 420846 11895643 ~ 11906820 (-)
G227384 NA non-coding downstream 495989 11831029 ~ 11831677 (-)
G227314 NA non-coding downstream 504962 11812483 ~ 11822704 (-)
G227488 NA non-coding upstream 309435 12639434 ~ 12639775 (-)
LOC120553123 NA non-coding upstream 570315 12900314 ~ 13004473 (-)
G227627 cpsf6 non-coding upstream 1077837 13407836 ~ 13454828 (-)
G227629 cacna2d4a,cacna2d4 non-coding upstream 1109993 13439992 ~ 13441507 (-)
G227636 NA non-coding upstream 1134111 13464110 ~ 13472016 (-)
G227429 LOC104958361,LOC103370548 other downstream 39512 12284926 ~ 12288154 (-)
cracr2ab LOC102301749,LOC103365394 other downstream 478725 11837248 ~ 11848941 (-)
pcloa pclo,LOC107085986,LOC103358500,LOC102794373,LOC108235068,LOC106514760 other downstream 650834 11617355 ~ 11676832 (-)
hgfa LOC103365344,LOC104958230 other downstream 845088 11458581 ~ 11482578 (-)
G227197 LOC102293685,LOC104918784,LOC102194436 other downstream 1346407 10980198 ~ 10981259 (-)
ube2h ube2h,LOC107690610,LOC107676921,LOC105888480 other upstream 708152 13038151 ~ 13066528 (-)
cacna1c cacna1c,LOC103459268,LOC106922075,LOC101471946 other upstream 796169 13126168 ~ 13344461 (-)
LOC120553407 napepld,LOC106940535 other upstream 1155887 13485886 ~ 13508247 (-)
LOC120553470 wnk1 other upstream 1186508 13516507 ~ 13617756 (-)
LOC120553486 NA other upstream 1313584 13643583 ~ 13659272 (-)

Expression


Co-expression Network