elk3 (LOC104930592,LOC102779228,LOC102209493,LOC102296588)


Basic Information

Item Value
gene id elk3
gene name LOC104930592,LOC102779228,LOC102209493,LOC102296588
gene type coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053134.1
NCBI id CM020931.1
chromosome length 29109922
location 20287264 ~ 20298086 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>XM_039791216.1
ctgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtttacacagaCGGGAATACTGCGCCAAAGGAAGTGCGCCGGTTCTCCGTCTTCGCGTTCCGACTTCCTGCTCTGAGGCAGGAGAGAGAAAAGCTGCGGATCCGCTTTCAGACAGCAGCAGGAGCATGGAGCccctacacaacacacacacaccgctataagacacaaacatacacacatcacacacaggcagacgGGTAGAGGAGCAGCGGCCGTCCACAGCAGGATCGCCTGCGTCTCTGGTGTCACCCCGTCATGGAGAGTTCCATCACACTCTGGCAGTTCCTGCTGCAGCTGCTACTCGACAAAAGCCACAAACATCTCATCTGCTGGACGTCCAACGACGGCGAGTTCAAGCTGCTCAAGTCAGAAGAAGTGGCCAAGCTGTGGGGGCTGCGCAAGAACAAGACCAACATGAACTATGACAAGCTGAGCAGAGCTCTGCGCTACTACTACGACAAAAACATCATCAAGAAGGTGATCGGCCAGAAGTTCGTCTACAAGTTTGTGTCGTCCCCCGAGATTCTGATGATGGACCCTGCGGTGGTGGAGTCAGGCCGCAGCGGCGAGGAAAGTGGGGGTGCGACATCAGAGCCTGAGGCTGAAGACGAGGATGGGGGTGGGAGAAACCAATACCTTCACTCCAGCCTGTACTCCTCCTTCACCGTCGGCTCACCGCAGCACTCCTTGGAACCGCATCGGCCGATCAAGACGGAGCCCAGATCCGATCACCACGGCGACAGCTCCTCTGTCATCCGATTCGTAACCAACCGCGGCCACTCCTCGCtatcccccaccccacccccatcCTCGGCCGACACCTCCGATTCCTCCAGATCGTCTCCCCGGCAGGCCCGctcttcctcctgctcctcctccccgCCGCAGAGCCCCGCCCACACACTGTGGAGGGGGCGTAGCCAGAGCACAGAGACTAATGCGATAGAGCAGAGCGCTCAGCCTCTAAACCTGTCGTCGGgtcacagggagagagagaggtcacaGGGCACGGCGATGCCAGAGAGGAGGAGATTGGCCAGTAGCGTGCCTTTAAAAAGCAGAAAACCCAAAGGCTTGGAAATCTCcgcttcctctctcctcctgacAGGAAGTGACCTCGTCTCCAGAGCTCTCAACAGCCCGGCGCTGCCTTCAGGCTCCCTGACCGCTGCCTTCCTCACCACACAGACTCCGTCTGGTCTGCTGCTCACTCCCAGTCCTCTACTCTCCAATATCCATTTCTGGTCCAACCTGAGTCCAGTGGGACCACTTAGCCCTGCACAACTGCAGAGCCATGCCCCCCTCtttcagTTCCCCTCACTGCTGAATGGAGTCATCCCTGTGCCTTTCACCAGCATGGACGctccctctcctctgctgctctccCCAAGCTCCCACAAGTCCTGATCCCCGAGCTTCAAGAGCAAACTAGGCCAAACCGGGCCGGATCAGCACAGACCAGTACCGAGCCAATCTGCTTTAGACTTTGACAATGAACCACACAGGAGTCAGACTTCCTCTGAGTCCAATTACACTTTCATCTGAAACCTGTTTCTTTGAATTTACAAATGAAGAAACAGGAGCTTTACTCTGAAGATTTGCTCTCTGAGAAGAGTATTTGCGTTAaacatttctttgtgtgtttactACAGTTCAACTGCTCATGTCATTTACATTTGTTTCTTCATCATCATACAAAGAAATTGACTGGAGGTCAGACCTCATCATGTTTCTTATCTTATTATCTCATCTCATTCCACTAGGTTCAAAGTTCAGTGATACAGACCAGTTGCAATTTCATTAGTGTTAGCGCTATTTTTCGCCTCTGCTCTGGCTATTGTCAATATCCACACCACTGACTCAAACAACGGAGATCTGGAGAAATCCTTTTTGTTTGGAATTATAAAATAAGAACTCAAGAATGACGGATGCTCAAGTACAGCTCATTTAAGTAAATACATGTTCACCATGCTACTGTACAGTTAAAGGAAATACAGTAATTTGCTTTCCTACTATGAGTTACCcgcaatttccaccaactgcggaacggctgcggatccgctccggaacggcggcggagtcaataggtttccattaaagtcaatgtgtgtattttcactgaCTGCAGATACGCAGAGTTTCTATTTTTGACTgatgccggagagctccgcagcaattcagcacagggcAGATTGGGCGGGACAGGAATAATGGCGGAGACTGGCCTGAAgtcagcacagagttgtttcccctctactcctctggatggaaacaaactacATCCTGTTATGTCGCGCGATCATATGTGAATTCGcaagatctcgtgggtcctcgtgacttcagctgtcagtcatggacGCAGCTGTTCCGCAACAAAtacggacctggtgggtattgaaggacggcagagcacggagccgacacgcagcggagccgatccgcagccgttccgcagttggtggaCATTGCGGTTAGCGTTAGACAAGAAAATTGACACCCCCCTCTCTCATGATTGTAGGCTCAATATGAAGCTATATGCAGGAGACGGTTagataaagactggaagcacaGAAACCTTACTCTGTCCAAAGGTGACTACTAGCTAGCAGCttactaattaacacattaacctttatagaaatttaaaaaaaacgacaaTTTGTAGTTTTATAGGGGATTGAAGGTAGAACCCAGGAGAAATAGTTTGGCACAAAACCTCTGTAAAACgatttttacactttggtttttgtacagattaaacaaacaccaacaataatttctttatttgtgAGCTGAGGTAAGGTGGACTTTGATAACTTTGGGCAGAGCCAGGCTGGCGGTttcaagtctttatgctaagctaaccagctgctggctgtaaatACATATATAACTGACAAATATAAATAGTGATGTAAATCTTCTCATCTTACACTCAGCAAGAAAGCCCGATTccaaaaatgtcacatttttcctTTAAATTTGGACATAAAATGGGGCCATAACTGGATGATTAAACGCCATAGCCATGGAAGATATTAAGTAGTGGGTGATTGTAATTTTTCCCCTGTGCCTTCGCCTTCCTTTAAATTGACCAAATCTTCAATGTGAACAATTTTGGGGTGTCTCTGAGTCTCATTTATCAATCTTTTtaggggtt

Function

NR:

description
PREDICTED: ETS domain-containing protein Elk-3

GO: NA

KEGG:

id description
K09430 ELK3; ETS domain-containing protein Elk-3 (SRF accessory protein 2)

RNA

RNA id representative length rna type GC content exon number start site end site
XM_039791216.1 True 3190 mRNA 0.49 5 20287264 20298086

Neighbor

gene id symbol gene type direction distance location
plxnc1 NA coding upstream 26836 20212787 ~ 20260428 (+)
LOC120553751 NA coding upstream 96356 20185082 ~ 20190908 (+)
LOC120553750 NA coding upstream 102901 20174451 ~ 20184363 (+)
LOC120553415 NA coding upstream 125225 20124641 ~ 20162039 (+)
LOC120553417 syn3 coding upstream 239268 19923771 ~ 20047996 (+)
LOC120553583 phyh coding downstream 57530 20355616 ~ 20362520 (+)
LOC120553582 phyh coding downstream 66717 20364803 ~ 20376348 (+)
ccdc3a ccdc3,LOC102778083 coding downstream 124751 20422837 ~ 20434548 (+)
nudt5 nudt5 coding downstream 267511 20565597 ~ 20570560 (+)
fbxo18 NA coding downstream 272902 20570988 ~ 20603179 (+)
LOC120553527 NA non-coding upstream 365410 19921100 ~ 19921854 (+)
G228922 NA non-coding upstream 370947 19916115 ~ 19916317 (+)
G228912 NA non-coding upstream 415541 19869393 ~ 19871723 (+)
LOC120553215 NA non-coding upstream 445602 19834007 ~ 19841662 (+)
G228905 NA non-coding upstream 476684 19809675 ~ 19810580 (+)
G228989 NA non-coding downstream 648 20298734 ~ 20301441 (+)
G229058 NA non-coding downstream 141372 20439458 ~ 20448557 (+)
G229060 NA non-coding downstream 144581 20442667 ~ 20454788 (+)
G229108 cdc123,LOC102776001 non-coding downstream 264977 20563063 ~ 20565180 (+)
G229130 NA non-coding downstream 309146 20607232 ~ 20607530 (+)
LOC120553418 NA other upstream 62079 20190928 ~ 20225185 (+)
LOC120553749 NA other upstream 113857 20147078 ~ 20173407 (+)
G228924 NA other upstream 301616 19982248 ~ 19985648 (+)
LOC120553104 LOC103364246,LOC103152567,LOC106913527,LOC103459763,LOC103459764,LOC106945279 other upstream 381312 19852928 ~ 19905952 (+)
LOC120553210 LOC104943308 other upstream 447882 19631937 ~ 19839382 (+)
ucmaa NA other downstream 84307 20382393 ~ 20391406 (+)
LOC120553023 LOC106946322,LOC103151516,LOC104922640 other downstream 850181 21148267 ~ 21150351 (+)
arid2 arid2 other downstream 1078786 21376872 ~ 21429238 (+)
G229423 NA other downstream 1539836 21837922 ~ 21847020 (+)
G229425 NA other downstream 1551125 21849211 ~ 21850601 (+)

Expression


Co-expression Network