si:dkeyp-38g8.5


Basic Information

Item Value
gene id si:dkeyp-38g8.5
gene name NA
gene type coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053134.1
NCBI id CM020931.1
chromosome length 29109922
location 10672048 ~ 10674051 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>XM_039791229.1
CCTCTGAAGGAAGAACGAGCAGGGAACGAGTGTTTTCTTACAAAGGGCACTTGATAAAGACACTAAAacgaaaaagagaaaaatggaAATCGAGGATCACTCTTACACGAGCACCACTTACGATAAAGTCAACCCCGTAGAGTTCACATATAAAATGAGTGCAAACGAAATTGAAGAATTTGTAAAGCTGAGGGTTTCAAACCATTACCTCTTCTCTGGAAGGAGAAATACTTCCATGTGGGCATGGAGGGCCATCCTGAAACATATGGGCTTGCAACACAAGATGACCCATAGTCAAGCATCCAAAAAGTGGGAAAACTTGAAGAAGAGATACAAGGACCTAAAGAACCCTCCAGATGGGGTGAAAGTGTTCCCTGAAACATGGCCTTATTTCAACCTGTTAGACGATGCCATGGAGGGTCGACTGAAAGGCAGCGCCCCCATCCTCAAAGCTCTCCCCACCAATGGGGATTTCTTACCCATCTACGAACCCAAGAAAAGGAAGGCATCCATAGTGATAAACTCCCCTGTGCCTTCGTTAGCAGGCGGGCCAGAGATCGAGGTTTCCCTGAACGGagatgaggatgaggaggaggcacAGGACGAAGGAAGCCAGGGAATGGATCATACCATGCAAGAGATGGAGCACGACAGGAACACAATGGACAGCGAAAGACAGGCgatggagagggagaaacagGTGATAGAGAGGGAGCGGCTGGTACTGCAGAGGGAGAGAGCTGTGCTGGACAGGGAAGTCGCCGCTCTGGACCGAGACCGAGTCtcgctggagagagagagggcgacaatagagagagaaaaggcagtgatggagagggagagggcaatggtggagagggacagagacgcTGTGAGCAGGGACCGGCTGGCTCTGGAGCGAGAGAAAGCCAGGCTGGAGAAAGTTAAAGAAAGGACTGAGGAGGTTACAGAAGAGAGCAGCAAGGTGAACCACGCAGATGTCTTggacaggaaggagagattcCTCAACTTGTTTGAAAAACTTATTGAAAATTTTTGATTCATGGGGGTTTTTCTGCACAAAACC

Function

NR:

description
PREDICTED: uncharacterized protein LOC107595941 isoform X1

GO:

id name namespace
GO:0043570 maintenance of DNA repeat elements biological_process
GO:0006259 DNA metabolic process biological_process

KEGG:

id description
ko03430 Mismatch repair
ko04111 Cell cycle - yeast
ko04113 Meiosis - yeast

RNA

RNA id representative length rna type GC content exon number start site end site
XM_039791229.1 True 1066 mRNA 0.49 4 10672048 10674051

Neighbor

gene id symbol gene type direction distance location
scyl2 NA coding upstream 13037 10648321 ~ 10659011 (+)
depdc4 depdc4 coding upstream 28277 10638588 ~ 10643771 (+)
anks1b anks1b coding upstream 149811 10288477 ~ 10522237 (+)
uhrf1bp1l NA coding upstream 387948 10249758 ~ 10284100 (+)
LOC120553694 ikbip coding upstream 430543 10235016 ~ 10241505 (+)
LOC120553009 NA coding downstream 345175 11019226 ~ 11023758 (+)
lrrc4.1 LOC104918788,LOC103365345,LOC100694050 coding downstream 688712 11362763 ~ 11367955 (+)
pax4 NA coding downstream 779409 11453460 ~ 11456592 (+)
LOC120553760 NA coding downstream 1137976 11812027 ~ 11822653 (+)
LOC120553761 NA coding downstream 1141062 11815113 ~ 11822653 (+)
G227116 NA non-coding upstream 4768 10665709 ~ 10667280 (+)
G227108 NA non-coding upstream 41836 10628808 ~ 10630212 (+)
G227107 tcp11l2,LOC102777109 non-coding upstream 44066 10625446 ~ 10627982 (+)
G227088 NA non-coding upstream 133359 10538196 ~ 10538689 (+)
LOC120553125 NA non-coding upstream 735455 9934175 ~ 9936593 (+)
G227139 NA non-coding downstream 31859 10705910 ~ 10709545 (+)
LOC120553079 NA non-coding downstream 87202 10761253 ~ 10770671 (+)
G227152 btg1 non-coding downstream 168505 10842556 ~ 10851951 (+)
G227155 NA non-coding downstream 197996 10872047 ~ 10872679 (+)
LOC120553495 NA non-coding downstream 240884 10914935 ~ 10927854 (+)
ndufb2 ndufb2,LOC102790702 other upstream 1430699 9237226 ~ 9241349 (+)
lhfpl3 lhfpl3,LOC101483460 other upstream 1498828 9134594 ~ 9173220 (+)
rps16 rps16,LOC103382554 other upstream 2239351 8426635 ~ 8432697 (+)
LOC120553156 LOC104945813 other upstream 3102745 7566655 ~ 7569303 (+)
LOC120553154 LOC104945813,LOC103356648 other upstream 3139971 7525892 ~ 7532077 (+)
G227121 kera other downstream 23203 10697254 ~ 10699718 (+)
G227141 dcn,LOC103382665 other downstream 58018 10732069 ~ 10737503 (+)
impdh1b LOC104968094,LOC103355171,LOC102293685,LOC102194436,LOC104918784 other downstream 274234 10948285 ~ 10986201 (+)
G227216 NA other downstream 428785 11102836 ~ 11112905 (+)
G227278 LOC104928793 other downstream 1015118 11689169 ~ 11757317 (+)

Expression


Co-expression Network