LOC120553142


Basic Information

Item Value
gene id LOC120553142
gene name NA
gene type coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053134.1
NCBI id CM020931.1
chromosome length 29109922
location 24830198 ~ 24835745 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>XM_039791230.1
atcaaaaacataacaaaacagaaCTACAGTGGAACACAGAGTTCCTTTCAACACAATCCTTTGGAGAGTTTGACAACGCCAGTATACAAACGAGAAATCATTGAGAAAATGTTTAGATCCATTTTTGGACTAAAATTATTTACAAGACCTCGGTCTTCAAGAGATATGGACTCTTCTACGAAGAAGTCCAAACGAAGGAGTGAGAGACCTTCATCTCCTGAAGACCTCAACCCTCCGACCATCTTGAGGGAGCACAGACGAAGGGGTGAGAGACCTTCGTCTAGTGGAGGCACCAACCCTTCTACCATCATGAAGGACCACAGGGAAAGGGGTGAGGGCCCTTTGTCTTGTGGAGAAAACCAGCCCTCTACCACCAGGCAGCAAGAACGAAGGGATGTGACATCTTTGTTCATCGTGGGCACCAACCCTTCTACCATCATGAAGGAGCGCAGGGGAAAGGGTGAGAGCCCTTTGTCTTGTGCGGAACACAAGCCCTCTACCACCAGGCAGCACGTACGAAGGGGTGAGagcccttcctcttcatcaACTGAAGACAAGCAGCCTTCTACTTCAAGGCGGCAGCAAGCATGGAGAGGTGAGAGCCCTTCGTCTTCCTCTTCTGAAGATGACCAGTGTTCTACCACCAGGCAGAGAGTACGAAGGTTTGAGAgcccttcctcttcatcctctgaaGACGAGCAGCTTTCTACTCCAAGGTGGCAGCAAGCATGGAGGGGTGAGAGCCCTTCGTTGTCATCTTCTGAAGATGACCAGCCCTCTACCACCAGGCTGCTAGTACGAAGGGATGTGAGCTCTCTGTTCATCGTGGGCACCAACCCTTCTACCATCACGAAGGAGCGCAGGCAAAGGGGTAAGGGCCCTTTGTCTTGTGCAGAAAATCAGCCCTCTACCACCAGGCAGCAAGTACGAAGGTTTGAGAGTCCTTCGTCGTCATCTTCTGAAGATGACCAGCGTTCTACCACCAGGCAGCAAGAAAGAAGGGCTGAGAGTTTGGAGGAGGagggtttaaaaagagaaagagagaggtgtgaagagatgaagagaaagaacgaggagaaggagaggaaaacgTTTAGTCTGCGTTCAAGAATGTACATTTGGTGGCTCAGTTGCAAGATAGACAACATTGCCAGGGACATCCAATCGACCTTTATGGATGAGAGCTACCTCCTGCGTCTTAATCTCAGAAATCCAgagaaaatggcagaaaaagaACGGCTGCATGACCTAAGGAGGGAGCTGGTCTTGTACAAACGCAGACAAGAATTTAAGTTGGAGAGGGAAGTGAGGAAGCAAAGACTGAAGGCAATGGAGCGCAGGCGAAAGGGTGAGAGCCCTTTGTCTTGTGAGGAAAACACGCCCTCTACCACCAGGCAGCAAGAACAAAGGGCTGAGAGcccttcctcttcatcttcAGAAGACAGGCAACCTTCTACTCAAAGGTGGCAGCAAGCACGAAGGGGTGAGAGCCCTTCGTCTTCATCTTCTGAAGACGATGAGCCTTCTACCACAAGGAGGCAGCAACAACGAAGTCCTTTGTCCTTCGTAGACATCAACCTTCCTACCACCTTCAGGCAGAATGGAGGAATTGGTGAGAACCATTTGCCCTGCATTGACATTGACCAGCCTACCATCTGGTGGGAGCACGTACGAAGGGGTGAGAGACCTTTGCCTCGTGGAGATTTCAACCCTCCAAACACCTTGAGGCCAGACGGACAAAGTGGTGACAGCCCTTCCTCTACATCTTCGTCTTCTGAAGACGACGAGGCTTCTACCACAAGGAGGCAGCAAGAAAGAAGGGCTAATAGccctttatctatctatctgggtgcaagaaaggagagagagttCATTGAAAGAGAAAAGCAGCGTTTGGAGGAGGAgagtttaaaaagagaaagagagaggtgtgaagagatgaagagaaagaacgaggagaaggagaggaaaacgTTTAGTCTGCGTTCAAGAATGTACATTTGGTGGCTCAATTGCAAGATAGACCGCATTGCCAGGGACATCCAGTCGACCTTTATGGATGAGAGCTACCGCATGCTTCATGATCTCAGAAATCCAgagaaaatggcagaaaaagaACGGCTGATTCACCGAAGGAGGGAGCTGATCGTGTACAAACGCAGACAAGAATTTAAGTTGGAGAGGGAAGTGAGGAAGCAAAGACTGAAGGCAATGGAGCGCAGGCGAAAGGGTGAGAGCCCTTTGTCTTGTGCAAAAAACAAGCCGAACACCTATCCTAATTTAGCTTTGGTTAGGTTCTGGCAGAGaccttagggttagggttagaccctaaagacagtagaaagaagaaagtaaggcaagaataggttgaaaatagtaata

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_039791230.1 True 2382 mRNA 0.49 4 24830198 24835745

Neighbor

gene id symbol gene type direction distance location
LOC120553386 NA coding upstream 41445 24773501 ~ 24788753 (+)
LOC120553387 NA coding upstream 80370 24732196 ~ 24749828 (+)
LOC120553385 NA coding upstream 194933 24620865 ~ 24635265 (+)
LOC120553040 NA coding upstream 225251 24597350 ~ 24604947 (+)
nopchap1 LOC104942935 coding upstream 258877 24566241 ~ 24571321 (+)
scube1 scube1 coding downstream 34202 24869947 ~ 24992165 (+)
mpped1 mpped1,LOC103131679,LOC106525904 coding downstream 175489 25011234 ~ 25113193 (+)
pnpla3 LOC103361965,LOC104964946 coding downstream 382795 25218540 ~ 25241938 (+)
LOC120553672 LOC103361951,LOC100711848,LOC101487241 coding downstream 408792 25244537 ~ 25260350 (+)
ttll12 ttll12 coding downstream 428251 25263996 ~ 25349341 (+)
G230192 NA non-coding upstream 31457 24795953 ~ 24798741 (+)
G230109 NA non-coding upstream 344681 24482310 ~ 24485517 (+)
G230011 NA non-coding upstream 566133 24260059 ~ 24264065 (+)
G229994 NA non-coding upstream 714077 24112965 ~ 24116121 (+)
LOC120553514 NA non-coding upstream 735033 24088025 ~ 24095165 (+)
G230249 NA non-coding downstream 349067 25184812 ~ 25191943 (+)
G230260 NA non-coding downstream 516132 25351877 ~ 25352174 (+)
G230259 NA non-coding downstream 540602 25376347 ~ 25377601 (+)
G230327 NA non-coding downstream 600406 25436151 ~ 25494355 (+)
G230336 NA non-coding downstream 659403 25495148 ~ 25495399 (+)
G230148 LOC102781993,LOC101465723 other upstream 51940 24620812 ~ 24778258 (+)
LOC120553083 NA other upstream 515491 24309542 ~ 24314707 (+)
LOC120553686 LOC105929833,LOC107382334 other upstream 884558 23934300 ~ 23945640 (+)
adm2a NA other upstream 981574 23833018 ~ 23848624 (+)
kcnc2 kcnc2,LOC100689973,LOC101475944 other upstream 1389535 23315421 ~ 23440663 (+)
LOC120553523 NA other downstream 527137 25362882 ~ 25373996 (+)
msrb3 msrb3 other downstream 806095 25641840 ~ 25662819 (+)
LOC120553706 NA other downstream 974662 25810407 ~ 25812828 (+)
arhgef39 arhgef39 other downstream 1202443 26038188 ~ 26106823 (+)
mrps33 mrps33,LOC106591474 other downstream 1536969 26372714 ~ 26381109 (+)

Expression


Co-expression Network