cand1 (cand1)


Basic Information

Item Value
gene id cand1
gene name cand1
gene type coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053134.1
NCBI id CM020931.1
chromosome length 29109922
location 3736482 ~ 3800595 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>XM_039791231.1
CATCCTGCTAACCCCGCCCCTCTGCAGAGAGAACGGGAGCCCCATtcaaacaaaccaaactccGCGCCCCGGGATGCGACagtagaaagagagaaaggcgGCATCAGCAGCTGAAGAAAAAGGAACCACGAACACACACTTTACCTCCAGAAACAGACAGCCAGGACCGTcacgcggacacacacacacacacagagacacacacaggcagtcgGAGACACACTCTTAGCGCTAGCAGGAGgaggctaacagctaacagcaGCAGACATGGCGAGCGCCTCGTACCACATCTCCAACCTGCTGGAGAAAATGACTTCCAGCGACAAGGATTTCAGGTTTATGGCCACTAACGACCTGATGACGGAGCTGCAAGACTCAATCAAACTGGACGACGACAGCGAGAGGAAGGTGGTGAGGATGATTCTCAAACTGTTGGAAGACAAGAACGGAGAAGTTCAGAATCTGGCCGTCAAATGCCTGGGGCCCCTGGTGAGCAAGGTAAAGGAGTACCAGGTGGAGACGATCGTGGACACTCTGTGCACCAACATGCTGTCGGACAAAGAACAGCTCCGAGACATTTCCTCCATCGGACTCAAAACGGTGATCGGAGAGTTACCGCCCGCCTCCAGCGGCTCTGCCCTCGCTGCCAGTGTTTGTAAGAAGATAACGGGGCGTCTGACGAGCGCCATCGCCAAACAGGAAGACGTGTCTGTCCAGCTGGAGGCGCTCGACATCATGGCTGACATGCTCTGCAGacaggGAGGCCTGCTGGTGAAtttccatccctccatcctgaGCTGTCTGCTCCCTCAGCTCACCTCCCCCAGACTGGCTGTCAGAAAGAGGACCATCATGGCTCTGGGCCACCTGGTTATGTCCTGTGGGAATCTGGTCTTCATCGATCTGATCGAGCACCTGCTGACCGAGCTGGGCCGGAACGACAACATGTCCACGACCAGAACCTACATCCAGTGCACGGCCGCCATCAGCAGACAGGCTGGACACCGGATCGgaGAGTATCTGGAGAAGATTATTCCTCTGGTAGTGAAGTTCTGTAACGTTGACGATGACGAGCTCCGAGAGTACTGCATCCAGGCCTTTGAGTCCTTTGTTAGGAGGTGTCCCAAAGAAGTTTACCCCCACGTTTCCACGGTCATCTCGCTCTGCCTGCGCTACCTGACCTACGACCCCAACTACAACTTTGACGATGAAGACGAGGACGATAACGCCATGGACGCCGAGCAGAACGATGAAGATTACCAAGGCAGCGATGATGAGTACAGCGACGATGACGACATGAGCTGGAAGGTGCGACGGGCGGCCGCCAAGTGTTTGGACGCCGTCGTCTCAACCCGTCACGAGATGCTGCCAGAGTTTTACCGCTCCGTCTCTCCTGCACTCGTCTGTCGCTTCAAGgagagggaggagaacgTGAAGGCGGATGTTTTCCACGCCTACCTGTCGCTGCTCAAACAGACCCGGCCGGCTCAGAGCTGGTTGGCTGACCCAGACGCCATGGAACAGGGAGAAACGCCACTGACCATGCTGCAGAGCCAGgtCCCCATGATAGTAAAAGCTCTTCACAAGCAGCTGAAGGAGAAAAGTGTCAAAACCCGTCAGTGTTGTTTCAACATGTTGACTGAGCTGGTGAACGTCCTCCCTGGAGCCCTGACTACCCACATCCCTGTACTAATACCAGGTATCATCTTCTCTCTGAACGATAAGTCGAGCAGCTCCAACCTAAAAATCGACGCCTTGGCGTGCCTCCACGTCATCATGGTCACACACCCGGCGCACGCCTTCCACGCCCACGTGCCCGCCCTCGTCCCGCCCGTGGTGGCGTGCGTGGGAGACCCCTTCTACAAGATCACCTCCGAGGCTCTGCTCGTCACTCAGCAGCTCGTCAAGGTGATCCGACCTCTGGACAACCTATCAGAGAGCTCCGACAGCTTCGACCCCTCCCCTTACATCAACGACCTGTTCACCTGCACAATCAAACGCCTGAAGGCCGCCGACATCGACCAGGAAGTCAAAGAACGAGCCATCTCCTGCATGGGACAGATCATCTGTAACTTAGGAGACCGGCTGCCCGCTGAACTTCCTGGAACGCTGTTGATCTTTTTAGAACGCCTCAAGAACGAGATCACCAGACTGACGACAGTGAAAGCTCTGACGCTGATCGCCGGCTCTCCGCTGAAGATCGACCTGAGGCCGGTTCTCCCCGACGCCGTTCCCATCCTCGCCTCCTTCCTCCGCAAGAACCAGCGAGCCCTGAAGCTCTGCACCCTGGCTGCTCTGGACATCCTGCTCCGAAActacagctctGCGGTGACTCCCGTCATGGTGGACGCGGTGCTGGCCGAGCTTCCTCCTCTCATCTCGGAGAGCGACATGCACGTGTCTCAGATGGCGCTGAGCTTCCTGTCCACGCTGGCGGTGACTCACCCGTCGTCGCTGAGTCAGCTGAGCGGAGGGAACATCCTCCAGCAGCTCATCGCGCTGGTCCGATCCCCGCTGCTGCAGGGCGGCGCGCTCTCCGCCATGCTCGACTTCTACCAGGCTTTGGTGGCGACAGAGACTCCCGGTCTGGGCTACATGGACCTGCTGAGGATGCTTACCGGTCCGGTTTACTCCCAGAGTGCCTCTCTGCCTCACAAACAGGCCTACTGCTCCATCGCCAAGTGTGTCGCCGCTCTGACCCGAGCCTGTCCCGACGAGGGACCCGCTGTGGTCGGCCAGTTCATCCAGGACGTGAAGAACAGCCGCTCCACAGACTCCATCAGACTGCTCGCTCTGCTCTCATTGGGCGAGGTGGGACACCATGTGGACCTGAGCAGCCAACCAGAGCTCAAGACGGTCATCCTGGACgctttctcctcctccagtgAAGAGGTGAAGTCGGCGGCCTCGTACGCGCTGGGCAGCATCGCGGTGGGGAATCTTCCGGAGTATCTGCCCTTCGTGCTGCAGGAGATCTCCTCCTCCAAGAGACAGTACCTGCTGCTGCACTCGCTCAAAGAGATCATCAgtTCAGCGTCTGTGTCCGGGCTGAAGCCCTACGTGGAGTCGGTCTGGACTCTGCTGCTCAAACACTGTGAGTGCCAGGAGGAGGGGACCAGGAACGTGGTGGCCGAGTGTCTCGGCAAACTGACGCTCATCGACCCCGAAACCCTGCTGCCCCGCCTCAAAGGATACCTGCTGTCAGgttcgTCGTACGCCAGGAGCTCCGTGGTAACGGCGGTAAAGTTCACCATCTCTGATCAACCACAGCCCATCGACCCGCTGCTGAAGAACTGCATAGGTGATTTCCTGAAGACGCTGGAGGACCCGGACCTGAACGTGCGTCGCGTTGCCTTGGTGACGTTTAACTCTGCGGCCCACAATAAGCCCAGTCTGATCCGAGAGCTGCTGGACTCGGTTCTACCGCAGCTGTACAACGAGACCAAAGTGAGGAAGGAGCTGATCCGAGAGgtggagATGGGTCCGTTCAAACACACGGTGGACGACGGTTTGGACTTGAGGAAGGCTGCGTTCGAGTGCATGTACACTCTGCTGGACAGCTGCCTGGACCGACTGGACATCTTCACCTTCCTCAACCACGTAGAGGACGGCCTCAAGGACCACTACGACATCAAGatGCTGACGTTCCTGATGCTGGCCCGGCTGTCCTCTCTGTGTCCCAGTGCTGTTCTACAGAGACTGGACAGACTGGTGGAGCCGCTGAGAGCCACATGCACCaccaagGTGAAGGCGAACTCGGTGAAGCAGGAGTTTGAGAAGCAGGACGAGCTGAAGCGGTCGGCGATGCGAGCCGTCGTGGCGCTGCTGACGATCCCCGAGGCCGAGAAGTCGCCGCTGATGTCGGAGTTCCAGTCCCAGATCTCGTCCAATCCGGAGCTGGCGGCCATCTTCGAGTCCATCCAGAGGGACTCCAGCTCCGCCAACATGGAGTCCATGGACACCAGCTAGAGAGAGACGATCGGACACACAACTTC

Function

symbol description
cand1 Predicted to be involved in SCF complex assembly and protein ubiquitination. Predicted to be active in nucleus. Orthologous to human CAND1 (cullin associated and neddylation dissociated 1).

NR:

description
PREDICTED: cullin-associated NEDD8-dissociated protein 1

GO: NA

KEGG:

id description
K17263 CAND1, TIP120A; cullin-associated NEDD8-dissociated protein 1

RNA

RNA id representative length rna type GC content exon number start site end site
XM_039791231.1 True 3995 mRNA 0.58 27 3736482 3800595

Neighbor

gene id symbol gene type direction distance location
LOC120553119 LOC104957567 coding upstream 168889 3546739 ~ 3567593 (+)
cct2 cct2 coding upstream 388496 3328950 ~ 3347986 (+)
LOC120553725 NA coding upstream 433732 3260679 ~ 3302750 (+)
LOC120553565 NA coding upstream 618842 3110841 ~ 3117640 (+)
trnat-ugu_32 NA coding upstream 803753 2932657 ~ 2932729 (+)
mdm1 NA coding downstream 41401 3841996 ~ 3873319 (+)
il22 NA coding downstream 81578 3882173 ~ 3888180 (+)
LOC120553047 NA coding downstream 198139 3998734 ~ 4019042 (+)
LOC120553050 NA coding downstream 293065 4093660 ~ 4107645 (+)
LOC120553052 NA coding downstream 354700 4155295 ~ 4175824 (+)
G225580 NA non-coding upstream 23146 3606829 ~ 3713336 (+)
G225581 NA non-coding upstream 28696 3608976 ~ 3707786 (+)
G225570 NA non-coding upstream 109224 3569522 ~ 3627258 (+)
G225566 NA non-coding upstream 120303 3577619 ~ 3616179 (+)
G225575 NA non-coding upstream 160461 3575050 ~ 3576021 (+)
G225602 NA non-coding downstream 11535 3812130 ~ 3812413 (+)
G225607 NA non-coding downstream 30843 3831438 ~ 3832530 (+)
G225707 NA non-coding downstream 85118 3885713 ~ 3942427 (+)
G225708 NA non-coding downstream 86029 3886624 ~ 3926965 (+)
G225721 NA non-coding downstream 196370 3996965 ~ 4051123 (+)
trnat-ugu_40 NA other upstream 201810 3534600 ~ 3534672 (+)
trnat-ugu_39 NA other upstream 202821 3533589 ~ 3533661 (+)
trnat-ugu_38 NA other upstream 204402 3532008 ~ 3532080 (+)
trnat-ugu_37 NA other upstream 207921 3528489 ~ 3528561 (+)
trnat-ugu_36 NA other upstream 214977 3521432 ~ 3521505 (+)
LOC120553144 rap1b,LOC101070080,LOC100707998,LOC103368175,LOC102210937 other downstream 13886 3814481 ~ 3841174 (+)
LOC120553793 NA other downstream 135079 3935674 ~ 3938954 (+)
G225894 NA other downstream 856849 4657444 ~ 4657969 (+)
abcc9 abcc9,LOC107387088 other downstream 1480663 5281258 ~ 5373637 (+)
prkcq prkcq,LOC102789446 other downstream 2859925 6660520 ~ 6686639 (+)

Expression


Co-expression Network