LOC120553155 (pah)


Basic Information

Item Value
gene id LOC120553155
gene name pah
gene type coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053134.1
NCBI id CM020931.1
chromosome length 29109922
location 7546428 ~ 7562205 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>XM_039791254.1
CTGCACACACAGGTTGTTCACCTGAAGAGCAAGAGGATGGACGCAGCATACAAAAGAGTCAATGGAAACTCCGGGCAagaggcagagacagaggagcCAGGCACAGGGGAGAATGGCATCAACCTGACGCACATCGAGTCCCGTCCGTCGCGGATGGACAAAGACCAGTACAAGTTCTTCGTCAGCGTGGACCCCACctgctcccaggctctggatgACGTGATCAAAGGCCTGGGTACACAAATCAGTGACCATGTGCATGACCTGTCACACAACAAACAGAAGGACACAGTGCCATGGTTCCCTAATGACATCCAGGACTTGGACCGCTTTGCCAACCAGATCCTCAGTTACGGCTCCGAGCTAGATTCTGATCACCCGggctTCACAGATCCAGTGTATAGAGCCCGCAGGAAGGAGTTTGCTGACATCGCCTACAACTACAGACATGGCCAAATCATCCCTCGAGTGGAGTacacagaggaggaaaaggCCACATGGGGGACGGTGTTCAAGGAGCTGAAGACTCTGTACCCACTTCATGCCTGCGAACACAACCGGGTCTTCCCCCTGCTGGAGAAATACTGCGGCTACAGGCAGGACAACATCCCACAGCTGGAGGACGTGTCCCGCTTCCTGCAGTCATGCACAGGCTTCCGGGTTCGCCCGGCGGCCGGCTTGCTCTCGCCCCGGGACTTCCTGGCTGGACTCGCCTTCCGTGTCATTTATTCCACGCAGTACATTCGTCACAGATCCAAGCCCACATACACACCTGAGCCGGATATCTGCCATGAGCTTCTGGGACACGTTCCTCTGTTTGCTGACTCCAGTTTCGCCCAATTCTCACAGGAATTCGGTCTTGCCTCCCTCGGTGCTCCCGATGAGTTCATTGAGAAACTTGCTGCAGTGTACTGGTTCACTGTGGAGTTTGGCCTCTGTAAGCAGGGCTCAGAGATCAAAGCTTATGGAGCTGGCTTGCTTTCATCGTTTGGAGAGCTGCAGtaCAGCTTCACAGACAAGCCAAAACTCCAGCCCTTTGACGCTGACAGGACCAGCATCCAGAAATACCCAATCACAGAGTACCAGCCTGTTTACTTTGTTGCTGAGAGCTTTGAGGATGCCAAAGAGAAAGTGAAGAAATTTGCAGCCGCTAGCCCTAAGCCTTTCTCAGTGCGCTACAATCCATACACCCAGAGTATTGAAGTGCTGGACAACACCCAGCAGCTCAAGAACCTGGCTGACAGCATCAGTAGTGAAATGGGGAAACTGTGTGAAGCCCTGCAGAAAGTAACTGCAAATGCAATCTGAGCCCAAGCAGCCTAAAGATCTCttaatttattcaataaaacTTGAATGCTTGCAAattagctttctttgtattTAAACAAATATGCCAAGTCAAATTGGCAATATTACTGTAATCCAATTAGTTTTTAAGTCAGGTGAATAAAGTGTAGCCTGTTAACAGCTAAAATGGTACTGTCATTATTATTACAGTATAAGTGTTATTAAGAGGGTTTGTCAGTTAACCTAAATTATCTCTTtagtgactttgatgaatttcaaacccaaaatgtaaacatcaaattttacttttaatatgatgtaaaaacaataaaaaaaaatgaaaatcctTTCTATGCACTTCAAACCTAAAATCATATTGACAGATCATTTCTGCCCCTAGCATCCATTTTGCTTgac

Function

symbol description
pah Predicted to enable phenylalanine 4-monooxygenase activity. Acts upstream of or within cellular response to estrogen stimulus. Is expressed in several structures, including digestive system; epidermis; eye; optic vesicle; and periderm. Human ortholog(s) of this gene implicated in intellectual disability and phenylketonuria. Orthologous to human PAH (phenylalanine hydroxylase).

NR:

description
PREDICTED: phenylalanine-4-hydroxylase isoform X3

GO:

id name namespace
GO:0042221 response to chemical biological_process
GO:0055114 oxidation-reduction process biological_process
GO:0006559 L-phenylalanine catabolic process biological_process
GO:0004505 phenylalanine 4-monooxygenase activity molecular_function
GO:0005506 iron ion binding molecular_function
GO:0004510 tryptophan 5-monooxygenase activity molecular_function
GO:0016597 amino acid binding molecular_function

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_039791254.1 True 1704 mRNA 0.48 13 7546428 7562205

Neighbor

gene id symbol gene type direction distance location
pah pah coding upstream 22009 7509964 ~ 7524419 (+)
metap2a metap2,LOC104945620,LOC102784010,LOC102294382 coding upstream 278978 7257270 ~ 7267450 (+)
vezt vezt coding upstream 290543 7240852 ~ 7255885 (+)
trnaw-cca_35 NA coding upstream 399088 7147269 ~ 7147340 (+)
lamb1b lamb1,LOC103364103 coding upstream 402423 7115962 ~ 7144005 (+)
LOC120553589 parpbp,LOC102779589 coding downstream 30674 7592879 ~ 7605838 (+)
LOC120553463 LOC103356656 coding downstream 307556 7869761 ~ 7887525 (+)
tnnt2c LOC102777397 coding downstream 333340 7895545 ~ 7897483 (+)
ppfibp1a LOC103362093,LOC102299773,LOC102192229 coding downstream 415872 7978077 ~ 8012811 (+)
myf6 myf6 coding downstream 900119 8462324 ~ 8464094 (+)
G226352 NA non-coding upstream 200266 7335054 ~ 7346162 (+)
G226319 usp44 non-coding upstream 274112 7272077 ~ 7272316 (+)
G226318 NA non-coding upstream 274721 7271317 ~ 7271707 (+)
G226317 NA non-coding upstream 275675 7269104 ~ 7270753 (+)
G226316 NA non-coding upstream 277670 7267509 ~ 7268758 (+)
G226452 igf1 non-coding downstream 53983 7616188 ~ 7707570 (+)
LOC120553625 NA non-coding downstream 329204 7891409 ~ 7955485 (+)
G226505 NA non-coding downstream 462156 8024361 ~ 8028661 (+)
G226507 syt1,LOC106518246,LOC100695586 non-coding downstream 485574 8047779 ~ 8057617 (+)
G226515 NA non-coding downstream 698128 8260333 ~ 8306828 (+)
LOC120553154 LOC104945813,LOC103356648 other upstream 14351 7525892 ~ 7532077 (+)
ascl1a ascl1 other upstream 120174 7423618 ~ 7426254 (+)
nrip2 LOC102781986,LOC100711207,LOC102191975 other upstream 146029 7370442 ~ 7400399 (+)
klhl42 klhl42 other upstream 178212 7363325 ~ 7368216 (+)
amdhd1 amdhd1 other upstream 214169 7323070 ~ 7332259 (+)
LOC120553156 LOC104945813 other downstream 4450 7566655 ~ 7569303 (+)
rps16 rps16,LOC103382554 other downstream 864430 8426635 ~ 8432697 (+)
lhfpl3 lhfpl3,LOC101483460 other downstream 1572389 9134594 ~ 9173220 (+)
ndufb2 ndufb2,LOC102790702 other downstream 1675021 9237226 ~ 9241349 (+)
G227121 kera other downstream 3135049 10697254 ~ 10699718 (+)

Expression


Co-expression Network