bcat1


Basic Information

Item Value
gene id bcat1
gene name NA
gene type coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053134.1
NCBI id CM020931.1
chromosome length 29109922
location 19297922 ~ 19309684 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>XM_039791267.1
CGTAATGGGACTGGCTTCAACCTGAGCAAGCAGTAAGCGGTTTAACGGTGAAGGTGCACAGACGTCTCTCCTGCTCTGAAGgGAAGCAGCTACATTTCTACCATCTCAATGgctgacaaaataacaccaagcTTTAAGGCAGCTGACCTGGTTATCGAGCTGTCCTCCACTCTAAAGCCCAAACCGAACGTGATTCCCTTCGGGACCGTCTTCACTGACCACATGCTGACCGTAGAGTGGAATGCGAGTGAGGGCTGGCAGGCTCCGCTCATCAAGCCCTTTGGGAACCTGTCTCTCCACCCGGCCACTTCGTCACTACATTACGCCATACAGCTGTATGAAGGGTTGAAGGCATACCGTGGGGATGACAACCAACTGCGCTTCTTCAGACCCATGCTCAACTTGAAACGCATGTCCAACACCGCTAAGAGAGCGTGTTTACCTGCCTTTGATGAGTCAGAGTTTCTGGAGTGTATCAAGCGACTGGTAGAGACTGACCAGGACTGGGTTCCTCACTCAGACTCAGGCAGTCTCTACATCAGACCAACATTTATTGCCACTGAGCCCGCTCTGGGTCTAAGGAAGCCTGGCAGTGCCTTGCTCTATGTGATCTTGTGTCAAGTGGGCTCTTACTTCAAGAACAAGGCAGGGCCCCTGTCCATGTGGGCCGACCCGAAGTACACACGGGCCTGGAAAGGAGGAACTGGAGATTGCAAGATGGGAGGGAACTATGGCTGTTCCTTGTTCCCCCAGTATGAAGCAGAGGAGCACGGGTGTCAGCAGGCGCTGTGGCTGTACGGAGAGGACCACCAGATCACTGAAGCAGGCACTATGAACCTCTTCCTGCACTGGATCAATGAGGATGGAGAGGAGGAACTTGCAACTCCACCTTTGGACGGCCTCATACTCCCAGGTGTGACCCGACTGAGTGTCCTGGAACTGACCAGGAAATggGGGGAGTTTAAGGTGACAGAGCGCTACCTGACCATGAGCCAGCTGTGCTCGGCTCTGAAGCAGCAGCGGGTCAAAGGGATGTTTGGCTCCGGTACTGCCTCCATGATCTGTCCCATCGGTCACATTGTTTACCAGGGAGAGaAATTGCACATCCCCTGCCAGGATAACAACTCACTGTTGACTCAGCGGTTGACAAAGGAACTCACGGATATACAGTATGGACGCACGCCCAGCGACTGGACTATCCTGGTGTAGCAGCGACGAAGACGCCTcgaacacacacagtgtgtgtgtacaataaGGAAGTGCTCTTACGCAATAACCAAATACTACTATATaacaagaaaaacaatgtataacaaTGTACGTGCAATATTTGTGTTCTGACTTGTTTAATACTGTATGCCGGCTCTGCGGCTAGCGTGTCACAGCGCTTTATCTCCTTTTTAAGCTTAAATTAATGACAAACACACAAGTGTCCAGAATAATTAACAAAAGTAGGCTAATGTCTCATGCAATACTGCACAATAACTTACAGTAATCTAGCCACCGTGGCTTACTCTGCTGCTTTCCAACCAAGGATACAGCTGTGGCTGGGATTGAAcataaaaaaaggggaaaacatATATGTGAGATGTTAAAGTTACAGAGAATTTCATATCACTTGGTAAGAGTTGCAAAGCAGCTACAAGAAGACTTTATCTAATTTTCCTAATTAACACATCTTCATATGGGTATGGcatgaaaaacaaaaccatGCAGGGTGAGATATTCCTTATGATTGTCTGTCTTTTACATTGCTAAAAAATTAATGT
>XM_039791268.1
CTACAATATCGACTCCTATAATTACTGTAGCCTGCGTGTTCGCGGATGCTGGGGATACATATTGGTGACGCAGgGAAGCAGCTACATTTCTACCATCTCAATGgctgacaaaataacaccaagcTTTAAGGCAGCTGACCTGGTTATCGAGCTGTCCTCCACTCTAAAGCCCAAACCGAACGTGATTCCCTTCGGGACCGTCTTCACTGACCACATGCTGACCGTAGAGTGGAATGCGAGTGAGGGCTGGCAGGCTCCGCTCATCAAGCCCTTTGGGAACCTGTCTCTCCACCCGGCCACTTCGTCACTACATTACGCCATACAGCTGTATGAAGGGTTGAAGGCATACCGTGGGGATGACAACCAACTGCGCTTCTTCAGACCCATGCTCAACTTGAAACGCATGTCCAACACCGCTAAGAGAGCGTGTTTACCTGCCTTTGATGAGTCAGAGTTTCTGGAGTGTATCAAGCGACTGGTAGAGACTGACCAGGACTGGGTTCCTCACTCAGACTCAGGCAGTCTCTACATCAGACCAACATTTATTGCCACTGAGCCCGCTCTGGGTCTAAGGAAGCCTGGCAGTGCCTTGCTCTATGTGATCTTGTGTCAAGTGGGCTCTTACTTCAAGAACAAGGCAGGGCCCCTGTCCATGTGGGCCGACCCGAAGTACACACGGGCCTGGAAAGGAGGAACTGGAGATTGCAAGATGGGAGGGAACTATGGCTGTTCCTTGTTCCCCCAGTATGAAGCAGAGGAGCACGGGTGTCAGCAGGCGCTGTGGCTGTACGGAGAGGACCACCAGATCACTGAAGCAGGCACTATGAACCTCTTCCTGCACTGGATCAATGAGGATGGAGAGGAGGAACTTGCAACTCCACCTTTGGACGGCCTCATACTCCCAGGTGTGACCCGACTGAGTGTCCTGGAACTGACCAGGAAATggGGGGAGTTTAAGGTGACAGAGCGCTACCTGACCATGAGCCAGCTGTGCTCGGCTCTGAAGCAGCAGCGGGTCAAAGGGATGTTTGGCTCCGGTACTGCCTCCATGATCTGTCCCATCGGTCACATTGTTTACCAGGGAGAGaAATTGCACATCCCCTGCCAGGATAACAACTCACTGTTGACTCAGCGGTTGACAAAGGAACTCACGGATATACAGTATGGACGCACGCCCAGCGACTGGACTATCCTGGTGTAGCAGCGACGAAGACGCCTcgaacacacacagtgtgtgtgtacaataaGGAAGTGCTCTTACGCAATAACCAAATACTACTATATaacaagaaaaacaatgtataacaaTGTACGTGCAATATTTGTGTTCTGACTTGTTTAATACTGTATGCCGGCTCTGCGGCTAGCGTGTCACAGCGCTTTATCTCCTTTTTAAGCTTAAATTAATGACAAACACACAAGTGTCCAGAATAATTAACAAAAGTAGGCTAATGTCTCATGCAATACTGCACAATAACTTACAGTAATCTAGCCACCGTGGCTTACTCTGCTGCTTTCCAACCAAGGATACAGCTGTGGCTGGGATTGAAcataaaaaaaggggaaaacatATATGTGAGATGTTAAAGTTACAGAGAATTTCATATCACTTGGTAAGAGTTGCAAAGCAGCTACAAGAAGACTTTATCTAATTTTCCTAATTAACACATCTTCATATGGGTATGGcatgaaaaacaaaaccatGCAGGGTGAGATATTCCTTATGATTGTCTGTCTTTTACATTGCTAAAAAATTAATGT

Function

NR:

description
branched-chain-amino-acid aminotransferase, cytosolic isoform X1

GO: NA

KEGG:

id description
K00826 E2.6.1.42, ilvE; branched-chain amino acid aminotransferase

RNA

RNA id representative length rna type GC content exon number start site end site
XM_039791267.1 True 1769 mRNA 0.48 11 19297922 19309684
XM_039791268.1 False 1761 mRNA 0.48 11 19297922 19309593

Neighbor

gene id symbol gene type direction distance location
LOC120553632 abcd2 coding downstream 566256 18711014 ~ 18731666 (-)
LOC120553351 NA coding downstream 592685 18667121 ~ 18705237 (-)
LOC120553458 cpne8,LOC104935575,LOC103365370,LOC101074159 coding downstream 645232 18561096 ~ 18652690 (-)
tprkb tprkb coding downstream 762280 18533638 ~ 18535642 (-)
trmu trmu,LOC102792203 coding downstream 767830 18524936 ~ 18530092 (-)
dnai7 NA coding upstream 36634 19346318 ~ 19353491 (-)
slc5a8 slc5a8 coding upstream 46188 19355872 ~ 19362110 (-)
arl1 arl1 coding upstream 87172 19396856 ~ 19407358 (-)
LOC120553005 NA coding upstream 108557 19418241 ~ 19428429 (-)
trnal-cag_18 NA coding upstream 128833 19438517 ~ 19438599 (-)
G228759 NA non-coding downstream 275680 19014655 ~ 19022242 (-)
G228731 NA non-coding downstream 322102 18893640 ~ 18975820 (-)
G228713 NA non-coding downstream 413847 18881161 ~ 18884075 (-)
G228683 NA non-coding downstream 738643 18558601 ~ 18559279 (-)
G228684 NA non-coding downstream 739413 18556053 ~ 18558509 (-)
G228824 NA non-coding upstream 16937 19326621 ~ 19328343 (-)
G228826 NA non-coding upstream 22957 19332641 ~ 19336028 (-)
G228834 NA non-coding upstream 53488 19363172 ~ 19363381 (-)
G228835 NA non-coding upstream 54472 19364156 ~ 19364416 (-)
G228836 NA non-coding upstream 55440 19365124 ~ 19365528 (-)
sox5 sox5 other downstream 27586 19028609 ~ 19270336 (-)
LOC120553633 slc2a13,LOC103369283 other downstream 474832 18738396 ~ 18823090 (-)
gramd4a gramd4,LOC103376144 other downstream 876515 18363259 ~ 18421407 (-)
tafa5a fam19a5,LOC103356475,LOC102793695 other downstream 1196927 17830616 ~ 18100995 (-)
G228465 NA other downstream 1995724 17295122 ~ 17302198 (-)
G228934 fam19a2,LOC103364248 other upstream 423418 19733102 ~ 19807098 (-)
etv6 etv6 other upstream 497130 19806814 ~ 19839350 (-)
rerg rerg other upstream 757211 20066895 ~ 20122393 (-)
cdk17 LOC104930593 other upstream 991408 20301092 ~ 20354627 (-)
G229199 NA other upstream 1647973 20957657 ~ 20958220 (-)

Expression


Co-expression Network