LOC120553165 (LOC104923755)


Basic Information

Item Value
gene id LOC120553165
gene name LOC104923755
gene type coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053134.1
NCBI id CM020931.1
chromosome length 29109922
location 23630935 ~ 23651180 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>XM_039791272.1
ATTTATTAATGGCAAAGCCAGCTGAAATCGCAGTAGATCTCCAGGAGCAGGAcgaggaagaagaagacgacAGAGTGGAGAGTTTGGATTTGAGACAGATTAGGACACTGTCAGAGCCACATAGAGAGGCAGCAGCAGTGCACCAGGCAGCAGAGGTGAGATGATGCGAGCGGGAGCAAAGCAGTACGTGGTGGCCCGGCCGCTGTACTCGGAGGAGGCCTTCGCCCAGGACCATGAGAAGGTCTACAGGCACGGCAAGACCATGCTGGACCACGTCAAGGACTACTTCACATGTGACGCCAAACGAGCCAAGAacgcagctctctctctcctgccggTCATCGGCTGGATGAAGATCTACCGAATCAAAGAGTGGCTGCTCAGTGACATCGTGTCCGGTGTCAGCACCGGACTGGTAGCTGTCCTGCAAGGTCTGGCCTACTGTCTGCTGGCCTCTTTGCCACCCTGGTATGGACTCTTCTCTGCCTTCTTTCCTGTCATCATTTACTTTATCCTGGGCACCTCCAGACACATCTCAGTGGGTCCGTTCCCAGTCTTGTGTCTGATGATCGGCTCGGTGGTCACCAGGATAGTCCCAGACGAGGGTCCGGCCCTCAACATCACAGGGCTGGAAGGCCTGACCCGAGACGAACAGAGAGTGCTGGTGGCTTCTTCTCTGACCTTCCTTACTGGTATCATGCAGCTGGCAATGGGTGTTATGCAGGTGGGCTTTGTTGTCATGTACCTTTCCGACACTCTGGTGTCCGGCTTCACCACAGCCGCTGCTGTCCACATCCTGGTGTCCCAGCTCAAGTTTGTGTTAGGATTGACTGTTCCAGGCATCAGTGGTCCACTCTCTCTCATATATACCCTGGAGATCATTTTTAACAAGATCACCTCCACCAATGTGTGTGACGTGGTGATCTCCTTGGTGATCATGGTGGTGGTGTTCATCGTCAAGGAGCTGAACGACCGATTTAAATCCAAGCTGCCGGTGCCAATCCCCATCGAGGTTATCATGACCGTCATCGCATGTGGAGTTTCATACGCGTTTGACTTCAAGACAAGATATGGCATTGATGTTGTTGGCCATATTCCAAAAGGGTATGAGTCTCCGATAGCACCAAACCTGCACATCTTCCAGGAGACAGCAGTGGAAGCATTTCCCATGGCCATAGTGGGTTTCGCTGTTGCCTTCTCCGTGGCAAAAGTCTATTCCGTAAAACATGATTACACCATAGATGGCAACCAGGAGCTGATAGCTTTTGGAGCCAGCAACATCTTTGGAGCTTCCTTCAAGTCTTTTGCTGCGAGTACAGCTCTTTCTAGGAGTGCAGTGCAGGAGAGCACAGGTGGCAAGACTCAGATAGCTGGTTTACTGTCAGCTATCATAGTGATGATCGTCACATTGGCCATTGGATTCCTACTGGAGCCGCTCCCAAAGTCTGTGCTGGGTGCTGTGGTCATCGTCAACCTGAAGGGCATGCTGATGCAGTTTAGAGACATCCCGTATCTGTGGAGGAGAGACAAACCAGACTGTGTGGTGTGGTTTGGTACCTGTACTGCAGCTATCTTGCTGGGATTGGATCTTGGATTGGCTGCAGGCCTCGGGGTGGAGCTGATCAGTGTGGTCCTCAGGGCTCAATTccCTCGTTGCAGTGTGCTAGCCAACATCAAAGGAACTGATATCTACAAAGACAGGAAGGACTATACTGatATATATGAGCCAGAGGGAGTCAAGATCTTCAGGATACCATCACCAATCTTCTTTGCCAACATCGAGTTCTTCAGGAGCAAGCTGGTGGAAGCTGTTGGATTTAATCCCTTGAGAGTgttgagaaaaagaaataaagcacTGAGGATGATCCGGAAACTTCTAAAGAAGGGAGACCTTCAATGGACATCAAAAGGCTTCCTGAATACCTCATGTGGATTCATCAAGGAGTCAGAGGATGAGAGCAACATGGAGGAGCTGGACCTGCCCACTGACTTCAAGGACCTTCCTGTCCGGATCGACTGGAGCGCCGAGCTTCCCGCCAACATCATTGTTCCCAGAGTGGACCTCCACAGCCTGGTCCTGGACTTTGCTGCTGTCTCTTTTCTAGACATCTCTGCTCTGAAGGGACTTAAAACTGCGCTGAAAGAGCTGATCCGGGTGGAAGTTGAGGTCTACATTGTGGCTTGTGATCCTTACATCCTGAAGAAACTGCACGACTGTTGCTTCTTTGATGATGAGGTTCAGTCGTCGATGTTCTTCCTGACGCTGCACGACGCCATGCTGCACATCCTCGAGAAACATCCAGAGTCCACGGAGAAGAAATCTGACTTTGACAGGATTAGAACAACGGTCACAGTGCACCACCCTGAAGGCATCTTGAGGAGCAGAGATAGAAATGCTCCAGAAACCAGGTTCTAGCTTCTGAAGGAGAAGATGATGATTTCTGGgagaaaacacagagaaagaccAAAGACAAAAAGAGTCAATATTTTACAGATCATGCTGTACAATACACTGAGGTAGTGAATAACATGGCTTTAACTTTATACATTTGACAATCTAAGTTTACATACACAGTAGTTACTGTAATGTAACAAAACTAATTTCatggtattgttttttttatattgtatatagtGAATTTGTAGAAAATATAGGTGCAATATATTTTACATGTTGTATAGTTATATTTTGAGAGGACATGAGAATAAATGAAAATCTGGCACACTGTTCTCAAAATAATGTCTGTTTGGGACCAAAGCAATGTGAAAAAGACTGAATATGTGGCTGaaatattgaaataaatatttgatcactcaaaataatgaca

Function

NR:

description
PREDICTED: chloride anion exchanger-like

GO: NA

KEGG:

id description
K14078 SLC26A3, DRA; solute carrier family 26 (chloride anion exchanger), member 3

RNA

RNA id representative length rna type GC content exon number start site end site
XM_039791272.1 True 2828 mRNA 0.48 21 23630935 23651180

Neighbor

gene id symbol gene type direction distance location
psmc2 psmc2,LOC103382982 coding upstream 36556 23588975 ~ 23594379 (+)
pmpcb pmpcb,LOC106576546 coding upstream 68716 23532258 ~ 23562219 (+)
ccdc107 NA coding upstream 331617 23289578 ~ 23299318 (+)
krr1 krr1 coding upstream 424457 23192726 ~ 23206478 (+)
LOC120553757 NA coding upstream 582341 23021415 ~ 23048594 (+)
LOC120553166 LOC105929793,LOC103363829,LOC108250965 coding downstream 3295 23654475 ~ 23676478 (+)
ppp6r2a LOC104923754 coding downstream 34823 23686003 ~ 23706968 (+)
ankrd16 ankrd16,LOC102787719 coding downstream 235567 23886747 ~ 23897898 (+)
trnay-gua_62 NA coding downstream 236157 23887337 ~ 23887424 (+)
gdi2 gdi2,LOC104923747 coding downstream 248061 23899241 ~ 23913813 (+)
G229821 dnajc2 non-coding upstream 45436 23579721 ~ 23585499 (+)
LOC120552982 NA non-coding upstream 373074 23232498 ~ 23257861 (+)
G229676 NA non-coding upstream 422735 23207076 ~ 23208200 (+)
G229668 NA non-coding upstream 443163 23149910 ~ 23187772 (+)
G229841 cbll1 non-coding downstream 16523 23667703 ~ 23679308 (+)
G229938 NA non-coding downstream 264631 23915811 ~ 23916388 (+)
G229945 NA non-coding downstream 296513 23947693 ~ 23948538 (+)
LOC120553072 NA non-coding downstream 318767 23969947 ~ 23971613 (+)
G229974 NA non-coding downstream 343386 23994566 ~ 23994835 (+)
kcnc2 kcnc2,LOC100689973,LOC101475944 other upstream 190272 23315421 ~ 23440663 (+)
phlda1 phlda1 other upstream 887756 22739717 ~ 22743179 (+)
G229428 NA other upstream 1762638 21867201 ~ 21868297 (+)
G229422 NA other upstream 1771726 21857983 ~ 21859209 (+)
G229425 NA other upstream 1780334 21849211 ~ 21850601 (+)
adm2a NA other downstream 181838 23833018 ~ 23848624 (+)
LOC120553686 LOC105929833,LOC107382334 other downstream 283120 23934300 ~ 23945640 (+)
LOC120553083 NA other downstream 658362 24309542 ~ 24314707 (+)
G230148 LOC102781993,LOC101465723 other downstream 969632 24620812 ~ 24778258 (+)
LOC120553523 NA other downstream 1711702 25362882 ~ 25373996 (+)

Expression


Co-expression Network