cbll1 (cbll1)


Basic Information

Item Value
gene id cbll1
gene name cbll1
gene type coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053134.1
NCBI id CM020931.1
chromosome length 29109922
location 23677168 ~ 23684068 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>XM_039791276.1
TTTCCTTCTCTCCTGtgttctttcctttcctctcttcacCTCGCCTTCTctatcccacaatgcattgtGTTCAGTCGTTGGATCATGGACCAAAGCGCAGACAATGATCTTCAAGGAAGTGATGGTTCTGGGATTTTGGGTGGCCCAGATGTTCGCAGACGAATCCCCATCAAACTCATATCTAAGCAACCCATAAGGAGCAAACCTCAGCCCCGCACCCAGAGACCCAGCAGCAGGCCATGTAAAAGTGAGGCTGGAGAAGATGATACCTTTGGCTTCAAGCAAGAGGAGAGGTTTGATTGTGGAGCTAAAGCTGGTGATGTGTTTGCAACTCAGAGGAGATTCCCCCAGGCACTGTTTTGGGACTATAAGTTAAATTTGATTGGAGAAAGAGATGAAGTACCAATTCACTTTTGTGATAAATGTGGTCTTCCTATCCAGCTATATGGACGAATGATCCCCTGCAAACATGTTTTCTGTTATGACTGTGCTTTGCTCCAtgagaagaaaggagaaaagATGTGCCCTGGCCTCACAATGTACAACTGCACAGACCCAGTGCAGCGCATCGAACAAAGCCAGCGGGGTGCCCTGTACATGTGCAGTGTTGTGCCGGGATGCAAGCGCACCTACCTGTCCCAGCGTGACCTGCAGGCCCATGTCAACCACCGCCACATGAGGGCCGCCAAGTCTTCCGCTGGCCGACAGGAGCCTGTGCACCTGCCCCCTGCATCCGAGGTCCCGGACCGTTTCCGCGTGCCTCCACCTCACCTACCCAAGAACCACGTGCATCTCCCAAACCCGCTCCAGCATGGCAGTCATGATCCCTACAGTCAGCCGCCCCCACCTACAGCTCACGAAGCCCCGCCCCCGACCGCTCTTGGTCCCGAGACATTCCGCATCGCCACGGTAACAACCCGTAAGCACAGCAATCTCATCACCGTGCCCATCCAAGATGACTCCTCCTCTCGGGAGCCCCTCTCTGGTGGGCCAGGCCCTGCTCAGccaccccaccaccaccccgGGGACTATCCCGGGCAGCCGCCTGTAGTGTCCCACTCTCACCACATGATGGCCCCGCCGCAGCAGCACTTCGGCCCGCCACCTCCCCCGCCTCCTCCTATCAGCCACCCCATGCAGCATCCTCCCCAGGCCTCTGGTACACCACATATGGTGTACAACCAGGCCCCTCCGCCCCCCATGTCCACAGCTCCACCACCCATCACCCCACCACCAGGGCACATCATGGGCCAGATGCCCCCCTATATGAACCACCCGCCCCCTGGGCCTCCACCACAGCACAGTGGCCCTCCTGTCAACGCCCCCCCACCTCATCATTACAACCCCAACTCCATGCAGCAGTTCCCTGAAGACCAGGGCACCCTCAGTCCCCCGTTCAGCCAGCAAGGAGGGCTCAGTCCTGGGATGTGGCCCGCTCCAAGAGGGCCCCCACCTCCACGAATGCAGGGCCCTCCTCCCCAGGGCCAGATGCCCGGACCACACCACCCAGATCAGGGCCGCTACCGGCCTTACTATCAGTAAACTGCCATCTGAATGAATGGGCGACAGTGTGTCATTCTGTTCCATACCACTTGTCTGAATAATGTGATAGTAGACCTCAGGGTTACAGGGTGTAGGACTTTGATATGACATTGGCCCCGAAGAAAATGTGTATGTGCTGCACATTTTAATTAAGTGTACTGAACTTCCCGCTGAACATACAATAGACTTGGAGAAGAGCAGcaatgtccctttttttttttatagtgtatggtaaatatttctgtatatatgtCAGCTGATTCCACgcatatgtactgtacattaaaaGACGCTAACTATGTCTCAATAAATTTTTAACGGCAGA
>XM_039791277.1
TTCATATTTTCCTTCTCTCCTGtgttctttcctttcctctcttcacCTCGCCTTCTctatcccacaatgcattgtGTTCAGTCGTTGGATCATGGACCAAAGCGACAATGATCTTCAAGGAAGTGATGGTTCTGGGATTTTGGGTGGCCCAGATGTTCGCAGACGAATCCCCATCAAACTCATATCTAAGCAACCCATAAGGAGCAAACCTCAGCCCCGCACCCAGAGACCCAGCAGCAGGCCATGTAAAAGTGAGGCTGGAGAAGATGATACCTTTGGCTTCAAGCAAGAGGAGAGGTTTGATTGTGGAGCTAAAGCTGGTGATGTGTTTGCAACTCAGAGGAGATTCCCCCAGGCACTGTTTTGGGACTATAAGTTAAATTTGATTGGAGAAAGAGATGAAGTACCAATTCACTTTTGTGATAAATGTGGTCTTCCTATCCAGCTATATGGACGAATGATCCCCTGCAAACATGTTTTCTGTTATGACTGTGCTTTGCTCCAtgagaagaaaggagaaaagATGTGCCCTGGCCTCACAATGTACAACTGCACAGACCCAGTGCAGCGCATCGAACAAAGCCAGCGGGGTGCCCTGTACATGTGCAGTGTTGTGCCGGGATGCAAGCGCACCTACCTGTCCCAGCGTGACCTGCAGGCCCATGTCAACCACCGCCACATGAGGGCCGCCAAGTCTTCCGCTGGCCGACAGGAGCCTGTGCACCTGCCCCCTGCATCCGAGGTCCCGGACCGTTTCCGCGTGCCTCCACCTCACCTACCCAAGAACCACGTGCATCTCCCAAACCCGCTCCAGCATGGCAGTCATGATCCCTACAGTCAGCCGCCCCCACCTACAGCTCACGAAGCCCCGCCCCCGACCGCTCTTGGTCCCGAGACATTCCGCATCGCCACGGTAACAACCCGTAAGCACAGCAATCTCATCACCGTGCCCATCCAAGATGACTCCTCCTCTCGGGAGCCCCTCTCTGGTGGGCCAGGCCCTGCTCAGccaccccaccaccaccccgGGGACTATCCCGGGCAGCCGCCTGTAGTGTCCCACTCTCACCACATGATGGCCCCGCCGCAGCAGCACTTCGGCCCGCCACCTCCCCCGCCTCCTCCTATCAGCCACCCCATGCAGCATCCTCCCCAGGCCTCTGGTACACCACATATGGTGTACAACCAGGCCCCTCCGCCCCCCATGTCCACAGCTCCACCACCCATCACCCCACCACCAGGGCACATCATGGGCCAGATGCCCCCCTATATGAACCACCCGCCCCCTGGGCCTCCACCACAGCACAGTGGCCCTCCTGTCAACGCCCCCCCACCTCATCATTACAACCCCAACTCCATGCAGCAGTTCCCTGAAGACCAGGGCACCCTCAGTCCCCCGTTCAGCCAGCAAGGAGGGCTCAGTCCTGGGATGTGGCCCGCTCCAAGAGGGCCCCCACCTCCACGAATGCAGGGCCCTCCTCCCCAGGGCCAGATGCCCGGACCACACCACCCAGATCAGGGCCGCTACCGGCCTTACTATCAGTAAACTGCCATCTGAATGAATGGGCGACAGTGTGTCATTCTGTTCCATACCACTTGTCTGAATAATGTGATAGTAGACCTCAGGGTTACAGGGTGTAGGACTTTGATATGACATTGGCCCCGAAGAAAATGTGTATGTGCTGCACATTTTAATTAAGTGTACTGAACTTCCCGCTGAACATACAATAGACTTGGAGAAGAGCAGcaatgtccctttttttttttatagtgtatggtaaatatttctgtatatatgtCAGCTGATTCCACgcatatgtactgtacattaaaaGACGCTAACTATGTCTCAATAAATTTTTAACGGCAGA

Function

symbol description
cbll1 Predicted to enable ubiquitin protein ligase activity. Predicted to be involved in protein ubiquitination and regulation of cell adhesion. Orthologous to several human genes including CBLL1 (Cbl proto-oncogene like 1).

NR:

description
E3 ubiquitin-protein ligase Hakai-like

GO: NA

KEGG:

id description
K15685 CBLL1; E3 ubiquitin-protein ligase Hakai

RNA

RNA id representative length rna type GC content exon number start site end site
XM_039791276.1 False 1867 mRNA 0.55 6 23677168 23684061
XM_039791277.1 True 1871 mRNA 0.55 6 23677168 23684068

Neighbor

gene id symbol gene type direction distance location
slc26a5 NA coding downstream 60092 23594352 ~ 23617076 (-)
dnajc2 dnajc2 coding downstream 88408 23562160 ~ 23588760 (-)
phax NA coding downstream 145361 23529757 ~ 23531807 (-)
cmah LOC101476433,LOC102306063,LOC100691852,LOC101466628,LOC102209249,LOC102786627,LOC103459632 coding downstream 401625 23229083 ~ 23275543 (-)
LOC120553577 NA coding downstream 489406 23177186 ~ 23187762 (-)
sbf1 sbf1 coding upstream 34271 23718339 ~ 23809346 (-)
glt8d2 glt8d2 coding upstream 184088 23868156 ~ 23885592 (-)
net1 net1,LOC104963784,LOC103383002,LOC107560732 coding upstream 382341 24066409 ~ 24109573 (-)
podxl podxl coding upstream 572715 24256783 ~ 24284709 (-)
LOC120553465 nfyb coding upstream 681270 24365338 ~ 24375224 (-)
LOC120553168 NA non-coding downstream 35664 23623580 ~ 23641504 (-)
G229872 pmpcb non-coding downstream 116826 23538248 ~ 23560342 (-)
G229867 NA non-coding downstream 149629 23527105 ~ 23527539 (-)
G229802 NA non-coding downstream 263410 23413116 ~ 23413758 (-)
G229774 NA non-coding downstream 364082 23298709 ~ 23313086 (-)
G229908 NA non-coding upstream 18636 23702704 ~ 23707197 (-)
G229909 NA non-coding upstream 29388 23713456 ~ 23713677 (-)
G229952 NA non-coding upstream 262429 23946497 ~ 23948780 (-)
G229987 NA non-coding upstream 396459 24080527 ~ 24081153 (-)
LOC120553435 NA non-coding upstream 433664 24117732 ~ 24202125 (-)
G229716 NA other downstream 437595 23104760 ~ 23239573 (-)
glipr1a NA other downstream 466671 23203768 ~ 23210497 (-)
LOC120553090 NA other downstream 1866071 21771088 ~ 21811097 (-)
slc38a2 slc38a2 other downstream 2202566 21461076 ~ 21474602 (-)
ptprz1b NA other downstream 2531635 21063691 ~ 21145533 (-)
LOC120553170 NA other upstream 6451 23690519 ~ 23711804 (-)
G229907 NA other upstream 15629 23699697 ~ 23700198 (-)
LOC120553046 NA other upstream 174151 23858219 ~ 23863974 (-)
G229950 gdi2,LOC100708443,LOC102215003 other upstream 224488 23908556 ~ 23914692 (-)
sult4a1 sult4a1,LOC102784496 other upstream 1507193 25191261 ~ 25217693 (-)

Expression


Co-expression Network