zdhhc17 (zdhhc17,LOC102798393)


Basic Information

Item Value
gene id zdhhc17
gene name zdhhc17,LOC102798393
gene type coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053134.1
NCBI id CM020931.1
chromosome length 29109922
location 22534254 ~ 22573905 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>XM_039791285.1
CAGCTGAACACTtgaaatCCTCTTGTTTCCCACAATGCTCTGCGAACATCACCACCAAGATGGCCGACGCTATGGAGGAATATGAGAAAGAAGCTGGCTGCGTCCCTATTCTCCATCCCGAGGAAATCAAACCCCAGAGTCATTACAACCACGGCTACAGTGAGAATGTCAGCCGCAAAAACCATGTGGATGACTACAGCACCTGGGATATTGTCAAAGCCACACAGTACGGCATCTTTGAGCGCTGCCGGGAGTTGGTGGAGGCGGGCTTCGATGTTCGGCAGCCAGACAAAGAAAACGTAACACTCCTCCACTGGGCCGCTATCAACAACAGGATAGATTTGGTCAAGTACTACATATCAAAGGGAGCCATAGTGGACCAACTGGGAGGAGACCTCAACTCCACACCCCTGCACTGGGCcaccagACAAGGCCATCTATCCATGGTGGTGCAGCTCATGAAATACGGCGCAGACCCGTCTTTGATCGATGGCGAGGGCTGCAGCTGCGTTCACCTGGCCGCCCAGTTCGGCCACACCTCCATCGTGGCCTACCTTATCGCCAAAGGACAGGATGTGGACATGATGGATCAGAACGGCATGACTCCTCTGATGTGGGCGGCTTACAGGACACACAGTGTGGATCCCACCCGGCTGCTACTGACCTTTAACGTGTCTGTCAACCTGGGCGACAAATATCACAAGAACACAGCGCTGCACTGGGCCGTGCTGGCCGGCAACACCACAGTCATCAGCCTGCTGCTGGACGCCAACTCTAACGTCGACGCACAGAACATCAAGGGTGAAACACCGCTAGATCTTGCCAAGCAACGGAAGAACGTTTGGATGATCAATCACTTACAGGAAGCGCGGCAGGCCAAAGGCTACGACAGCCCGTCATACCTGAAGAGACTGAAGATGgacaagTTAATAAAGGAGTTCAGGCAGAAGGTGATGCTGGGAACACCCTTCCTGGTCATCTGGCTCGTTGGTTTTATCGCTGACCTGGACATTGACTCCTGGCTGATCAAGGGCCTCATGTACGCAGGCGTCTGGATCACTGTGCAGTTCCTCTCCAAgGCTTTCTTCGACCACTCCATGCACAGCGCTCTCCCTCTGGGAATCTATCTGGCCACCAAGTTCTGGATGTACGCCACCTGGTTCTACTGGTTCTGGAACGATCTCCCCTTTGCCACTGTTCATATGCCCTTCCTGATAAACACGCTGGCTCTCTTCTACAACTTTGGCAAATCCTGGAAGTCTGACCCAGGAATTATCAAAGCAtcagaggagcagaagaaaaagACAATTGTGGAGCTGGCAGAGACGGGCAGCCTGGATCTGAGCATATTCTGCAGCACCTGCTTGATACGAAAGCCCATCAGGTCCAAACACTGCGCCGTGTGCAACCGCTGCATCGCCAAGTTCGACCACCACTGTCCCTGGGTGGGGAACTGTGTCGGAAGTGGGAATCACCGCTACTTCATGGGTTATCTGTTCTTCCTGCTCTGCATGATCTGCTGGATGATATATGGCTGCATTTCCTACTGGAGGCTCCACTGTGCCACCAGTTACGCCAAGGATGGTTTCTGGCTCTATCTGACCCAGATCGCCTCCTGCTCTCCCTGGATGTTCTGGATGTTCCTCAATAGCATCTTCCACTTCATGTGGGTGGCCGTGCTCATCATGTGTCAGCTCTACCAGATCGCTGCTCTGGGAATCACCACCAATGAGAGGATGAACGCTCGGAGATACAAGCACTTTAAAGTCACAGCCACGTCCATCGAAAGCCCCTTCAAccatGGCTGCTTCAGAAACCTGATAGATTTCTTTGAGATCCGCTGCTGCGGTCTGATCCGGCCCGTGGCCGTGGACTGGACCACGCAGTACACAATAGAATACGACCAGACGTCTGGCTCGGGCTACCAGCTGGtgtagaggaggaagaagaggggggggggtggtggaaGTAAGTTTCGGAGTGATTGCTGTCCCGTCCCCTCAGCCCCCCGTCTCCCACACCCACCCCCCCCGGCGCTCATATCGGAGCGATGCTGTTCTCGGGAGCgcttgctttttttcttttttttttggaacatCTCTCCCTCACCGATCAAaaagactttgaaaaaaaatcagccAGGACTAGCATGCTGTAACGGGGCAAGGCCTCTCCCTCCGCCCTCACCACCACCCtttattactattactactactactattctACAACATCAGACTGTACCTCCACATTCCCTACCCTAACCCCACCCCTCCACCTCGTCTCTTCTCCTGAGCCCTTAGGACGGTTGCGTTGCTGCCAGGCACCAACGGAGAGGAGAGAGGCCGACGGACCAGAGgaattccaaaataaaagctcttCTGTTTGTACCGGAGATGTGGCGCTGCGGAGACGGCAGCTCCGTAAAGTGGCAGTATAGCTCTCTACCCATCCCACTTTATATCCTTATTTATGGTGTCCCTGTTGATGTGCCCTGTGTGTatcttttttggttttggatTGGTTCAGGAACTCTGCTGTTCCTGTGATAATGAACTGTGGTGGCCAGGAAGGCTGAAggaaagttgttgttttttttaaaccatgaaTAGAGATAAGGGAATGTCTTTTTAAGGTCTTGATTTTGCACCGTGATTATTTCTTGGGAGTCGAGCTGATGAGGATTTGCCAATAGATAGTTGAACTTATCAGAGGGAAGTGTGTTAACAGGTGGAGCCGCCGGAGGAGTCCAACTTCTCACCTGCTGAAATAAAGCCGCAAGACGGAGTTTTAAGAGGATATCcaagtgtttgtttgtttttgttttttttacttaaagtaaaacCGTTGTTGTGCAGTAGTAACGCAGGATTAAGTGCACTCCTTCGGCGGCGCCCACTTTAGACGTGACAGAAAATATCCTACAGACAATGTGATACaagtatatttatttaaaaactatttataGACAAAGTTACTATGTTCTAGCGCCATCATTTTAACGTTTCACATCATTTTAGCTGAGTAGGTTTTTATGAGCAACAAGTACCTGTAGCGGTTTGACATGGAAGCCCGGGAACTTCACCATAAAACTCTAAATAGACAGGTACAGCGAGCGTATTTATTAACAACAGAGTTGAGTATAAGAAAAGGAACGCAGCAGGAGGACAGATGAGTTTACAAGAAAGGTTCATTCCATGTTttttggggttgttttttttaactgtaaagtCTTACTTGTCTTTTTTGTCTGCCTATAACATTGCACTGATCATTTGTTTTTAAGTTACTTGTTTTTGGCTGTTACTGAACACACGGGCCCAGCAGCGCCGCTTCCTTTGTttacagagaggaggaggaggaggggccaATCAGACATGGCCAGCTCCCATCACTTCCTGTCTGGCCCCCccgcaggcagcagcagcaggatggaCTGAAGTGTAAAGAATGTGCACCTGTACATAAACAATATCTTTCTCTgtaactattttcttttctttcttttttttgtcagtgttaGTTGAAGGTGCTCCtggattattttttctttttagtttggGGGATTTCTTCCAACCAGACGGAAAGAAGAAAATCAAGTGACTATACTCCAAGTGTATGACCGTAGCTTTTAGTGATGTCCGACACTGCTGTCTATAGGCATTTTAACCCCTGAATACCTTAAATTTCCCCCCCCGCCAAGAAACTCCACTGCATGTACGATGCTTGGGACAACTGGGCTCTCGCCGTCGCCCCCCCAACCCCATAGTCATCACCATGGTGACAGCCCGGCAAGCCACGTGTCTGTATATAGTGAATGTTAAGTATTTGCAAGTACTTTTCTGCATTGCGTTCAtttgtctgtcttttcttttattattttctttctcgCAAATCCAGTGTGTTTAGTGGAAGTTTTCTTTCAGGTCGCCAGATTGGCCCACCTGTGCCAGTGTGTAATATATATGAATGTTCCATGCTCGTGGACTCTGTAGTCATCctaaaggtttttattttttatttctatgtccTATATCGCTGGGTTTGTTATACCACTGGATGTACAAATTGTAAAGCAAAGACACTAGAGAACTAAGGCAGacgccaatttttttttttttctttttctaaaagcTGAAATGTGATCATGCAATAGTTTTAAGGAAAGAGGGAGGTTGTATTACATTAAGGCCTCTGGAACGTTTGGGCCTCATGTTTGCATCATCAGAAGGGGGCGGTTATGTCATCATAGTCCATGTTTCACTCCCCCCATCCTGCAAACCAACCACTGATGTCATTTCTGCcctacaaagacaacacaaagcaGCTACTTTTTGTGTGCTTTAAAGGCCAAAGGTTGATTTCATATCAGTACCAGTAACTAACCACTTGTGTTCTAATCAATCATGCCTTTTTAAGGGACAGGAGGTCGATGCAGgctggtgtttttgtttttctaggGCAGGGTTCTGCTCACCCAGGATTTCAGTCCTCACTAGTTCTTCCAGCAGCCTGAAACGTTTCtgttctgtctccctctctcacccCGCCCATGTGGGATCATAaaatttaagtttaaaaaaaaaaaaaaaaaa
>XM_039791286.1
ggTTTTCCCCCTACACAGCCTCTTGTTTCCCACAATGCTCTGCGAACATCACCACCAAGATGGCCGACGCTATGGAGGAATATGAGAAAGAAGCTGGCTGCGTCCCTATTCTCCATCCCGAGGAAATCAAACCCCAGAGTCATTACAACCACGGCTACAGTGAGAATGTCAGCCGCAAAAACCATGTGGATGACTACAGCACCTGGGATATTGTCAAAGCCACACAGTACGGCATCTTTGAGCGCTGCCGGGAGTTGGTGGAGGCGGGCTTCGATGTTCGGCAGCCAGACAAAGAAAACGTAACACTCCTCCACTGGGCCGCTATCAACAACAGGATAGATTTGGTCAAGTACTACATATCAAAGGGAGCCATAGTGGACCAACTGGGAGGAGACCTCAACTCCACACCCCTGCACTGGGCcaccagACAAGGCCATCTATCCATGGTGGTGCAGCTCATGAAATACGGCGCAGACCCGTCTTTGATCGATGGCGAGGGCTGCAGCTGCGTTCACCTGGCCGCCCAGTTCGGCCACACCTCCATCGTGGCCTACCTTATCGCCAAAGGACAGGATGTGGACATGATGGATCAGAACGGCATGACTCCTCTGATGTGGGCGGCTTACAGGACACACAGTGTGGATCCCACCCGGCTGCTACTGACCTTTAACGTGTCTGTCAACCTGGGCGACAAATATCACAAGAACACAGCGCTGCACTGGGCCGTGCTGGCCGGCAACACCACAGTCATCAGCCTGCTGCTGGACGCCAACTCTAACGTCGACGCACAGAACATCAAGGGTGAAACACCGCTAGATCTTGCCAAGCAACGGAAGAACGTTTGGATGATCAATCACTTACAGGAAGCGCGGCAGGCCAAAGGCTACGACAGCCCGTCATACCTGAAGAGACTGAAGATGgacaagGAGTTCAGGCAGAAGGTGATGCTGGGAACACCCTTCCTGGTCATCTGGCTCGTTGGTTTTATCGCTGACCTGGACATTGACTCCTGGCTGATCAAGGGCCTCATGTACGCAGGCGTCTGGATCACTGTGCAGTTCCTCTCCAAgGCTTTCTTCGACCACTCCATGCACAGCGCTCTCCCTCTGGGAATCTATCTGGCCACCAAGTTCTGGATGTACGCCACCTGGTTCTACTGGTTCTGGAACGATCTCCCCTTTGCCACTGTTCATATGCCCTTCCTGATAAACACGCTGGCTCTCTTCTACAACTTTGGCAAATCCTGGAAGTCTGACCCAGGAATTATCAAAGCAtcagaggagcagaagaaaaagACAATTGTGGAGCTGGCAGAGACGGGCAGCCTGGATCTGAGCATATTCTGCAGCACCTGCTTGATACGAAAGCCCATCAGGTCCAAACACTGCGCCGTGTGCAACCGCTGCATCGCCAAGTTCGACCACCACTGTCCCTGGGTGGGGAACTGTGTCGGAAGTGGGAATCACCGCTACTTCATGGGTTATCTGTTCTTCCTGCTCTGCATGATCTGCTGGATGATATATGGCTGCATTTCCTACTGGAGGCTCCACTGTGCCACCAGTTACGCCAAGGATGGTTTCTGGCTCTATCTGACCCAGATCGCCTCCTGCTCTCCCTGGATGTTCTGGATGTTCCTCAATAGCATCTTCCACTTCATGTGGGTGGCCGTGCTCATCATGTGTCAGCTCTACCAGATCGCTGCTCTGGGAATCACCACCAATGAGAGGATGAACGCTCGGAGATACAAGCACTTTAAAGTCACAGCCACGTCCATCGAAAGCCCCTTCAAccatGGCTGCTTCAGAAACCTGATAGATTTCTTTGAGATCCGCTGCTGCGGTCTGATCCGGCCCGTGGCCGTGGACTGGACCACGCAGTACACAATAGAATACGACCAGACGTCTGGCTCGGGCTACCAGCTGGtgtag

Function

symbol description
zdhhc17 Predicted to enable palmitoyltransferase activity. Acts upstream of or within axonogenesis. Predicted to be located in several cellular components, including Golgi apparatus; cytoplasmic vesicle membrane; and presynaptic membrane. Predicted to be integral component of membrane. Predicted to be active in Golgi membrane. Is expressed in nervous system and spinal cord. Orthologous to human ZDHHC17 (zinc finger DHHC-type palmitoyltransferase 17).

NR:

description
PREDICTED: palmitoyltransferase ZDHHC17

GO:

id name namespace
GO:0008152 metabolic process biological_process
GO:0016021 integral component of membrane cellular_component
GO:0016746 transferase activity, transferring acyl groups molecular_function
GO:0008270 zinc ion binding molecular_function

KEGG:

id description
K20032 ZDHHC13_17, HIP14; palmitoyltransferase ZDHHC13/17

RNA

RNA id representative length rna type GC content exon number start site end site
XM_039791285.1 True 4592 mRNA 0.48 19 22534254 22573905
XM_039791286.1 False 1928 mRNA 0.54 17 22536909 22571882

Neighbor

gene id symbol gene type direction distance location
nav3 nav3 coding downstream 355147 21948736 ~ 22179107 (-)
LOC120553803 LOC103357126 coding downstream 588679 21937338 ~ 21945575 (-)
si:ch211-214j24.10 LOC103357125,LOC104922658 coding downstream 598858 21928239 ~ 21935396 (-)
apex1 apex1 coding downstream 639532 21890610 ~ 21894722 (-)
selenoo2 LOC106935628,LOC103357121,LOC107081058 coding downstream 697658 21829011 ~ 21836596 (-)
LOC120553033 LOC103354931,LOC102080527,LOC102775588,LOC101467455 coding upstream 302018 22875923 ~ 22893181 (-)
LOC120553034 NA coding upstream 346277 22920182 ~ 22942119 (-)
LOC120553037 NA coding upstream 518914 23092819 ~ 23116421 (-)
LOC120553577 NA coding upstream 603281 23177186 ~ 23187762 (-)
cmah LOC101476433,LOC102306063,LOC100691852,LOC101466628,LOC102209249,LOC102786627,LOC103459632 coding upstream 655178 23229083 ~ 23275543 (-)
G229589 csrp2 non-coding downstream 2956 22514990 ~ 22531298 (-)
G229576 NA non-coding downstream 77809 22456189 ~ 22456445 (-)
LOC120553112 NA non-coding downstream 84867 22381765 ~ 22449387 (-)
G229558 NA non-coding downstream 213726 22320273 ~ 22320528 (-)
G229546 NA non-coding downstream 586745 21912405 ~ 21947509 (-)
G229605 NA non-coding upstream 83028 22656933 ~ 22737978 (-)
G229608 NA non-coding upstream 89986 22663891 ~ 22665227 (-)
G229609 osbpl8 non-coding upstream 92788 22666693 ~ 22669268 (-)
G229610 NA non-coding upstream 103945 22677850 ~ 22678544 (-)
G229616 NA non-coding upstream 167469 22741374 ~ 22745099 (-)
LOC120553090 NA other downstream 723157 21771088 ~ 21811097 (-)
slc38a2 slc38a2 other downstream 1059652 21461076 ~ 21474602 (-)
ptprz1b NA other downstream 1388721 21063691 ~ 21145533 (-)
G229199 NA other downstream 1576034 20957657 ~ 20958220 (-)
cdk17 LOC104930593 other downstream 2179627 20301092 ~ 20354627 (-)
G229716 NA other upstream 530855 23104760 ~ 23239573 (-)
glipr1a NA other upstream 629863 23203768 ~ 23210497 (-)
LOC120553170 NA other upstream 1116614 23690519 ~ 23711804 (-)
G229907 NA other upstream 1125792 23699697 ~ 23700198 (-)
LOC120553046 NA other upstream 1284314 23858219 ~ 23863974 (-)

Expression


Co-expression Network