kcnj8 (kcnj8)


Basic Information

Item Value
gene id kcnj8
gene name kcnj8
gene type coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053134.1
NCBI id CM020931.1
chromosome length 29109922
location 5383033 ~ 5392940 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>XM_039791338.1
TCTGGACTCTACAAGTTGGACTACGTCAACAGGATAGAGGAGAGCGTCCCAGCCCTCAGAGGAGCTGAGCACACAAACGTCCTCTAAATGTCCACACAAGGAGACGAGCTGCTGCGTCTCGGAGCGGGCTTTTCCTGCAGGTGGACATGTTTGGTCCGCGCGTAAAGACGCACTGAAGACGGACTACAAAACTTTGacgctttttttcttcttcttcttcttcttcttcctctttttcgaTCACCAAAAGAGCATCAGCGGCAGAAAAAGATGTTGGCGAGGAAAAGCATCATCCCGGAGGAGTTCGGTGTGCCGGGGCTCGCCTCCCGGATGCCCCGCAAGCCGGTGTTCAGGGACCGCGTGAACAAGGCGCGCTTCATCGCCAAAAACGGATCGTGCAACTTGGCGCACAAGAACATCCGCGAGCAGGGCCGGTTCTTGCAGGACGTGTTCACCACGCTGGTGGACCTGAAATGGCGCTTCACGCTGGTCATCTTCACCACGACGTTCGTCAGCAGCTGGCTGCTGTTCGCCATGAGCTGGTGGCTGGTGGCGTTCGCGCACGGGGACCTGGGCCAGGAACGGGAGCGGGAGTTGGATCTGGACCCGGAGCGGCACAACAGGACCCAGTGCGTCCCCCGAGACAATGAGTTGGTTCTGGACCCGGAGCAGCACAACAGGACCCAGTGCGTCACCGGAGTCAAGTCGTTCACGTCAGCCTTCCTGTTCTCCATCGAGGTTCAGGTGACCATCGGCTTCGGAGGACGTATGATAACAGAGCACTGTCCGACCGCCATCACCGTCCTCATCATGCAGAACATCATCGGGCTCATCATCAACGCTGTCATGCTGGGTTGCATCTTCATGAAGACGGCGCAGTCAAACCGTCGGGCAGAGACGCTGATCTTCAGCCGCCACGCCGTGATCGCCGTCAGAAACAACTGCCTGTGTTTTATGATTCGTATCGGGGATCTCAGGAAGAGCATGATCATAGGAGCCACCGTCAGGTTACAGGTGGTGAGGAAGACGACCACGCCGGAGGGGGAGGTGATCCCCATCCATCAGATCGACGTCCAGACGGAGACGGCGTTGGCCAGCAACAGCCTGTTCCTCCTCGCCCCGCTCATCATCTGCCACATCATCGACAAAAACAGCCCGCTGTACGACTTGTCGGCCATGGAGCTGCAGTGCAGCGACCTGGAGGTGATCGTCATCCTGGAGGGCGTCGTGGAGACGACGGGGATCACCACGCAGGCCCGGACCTCCTACGTCTCCGACGAGATCCAGTGGGGTCACCGCTTCGTTCCCATAGTGACGGAGGAGGAGGGCGTGTACTCTGTGGACTACTCCAAGTTTGGTAATACAGTCAAGGTAACGACCCCACGCTGCAGCGCCAGAGAACTGGACGAGAAGCCGTCTATCCTAATCCAGACTCTGCAGAAGAGCGAGCTGTCGCACCAGAACTCGCTGAGGAAGCGTAACTCCATGCGGCGCAACAACTCCATGCGTAAAAACGCAGGAGGCAGCGGGGGTCTGCGCAGGAACAACTCGGGGCTCCTGACACCGAAAGTCCAGTTCTTCACCCCGACCGAGGGAGGCCAGAACCTGAACGCCGTTACCTGACATGAGGCCTGCCTCCCGATGGCTGCCCTGCTCCTCCTGGTGGCCAGGAGGATTATGGGCGTTGGTGTTTCTCCTCGTCTAACGGGACGCCTTCTCTTTCTGTTCCCTGCCTTATCTAGACTCCCGACACTTTTAATGTTACCTCATGTTCACACGCATGGAGTAATCTAGTTCTTATTTTTTAGAATGAACTGTTGCAGTTTATTTCTCCACACTCATAGCGCTGCCACAAACCAATCCATTTTTCTATCTTTTCATTATCAACAAAGCAATAATAAACTTTGGGCCTTTATGCCTGTTTTACCATTTCTAGGGAGATGTATTTTCTTATTGAATAAAGTCACAGTCTAACTACTTGTAGCGGTAGCTAGTGGCAATCAATCACTGTACTGACCatgtgtgtttttcactttattttgtcttttgtgttgTTGAGAATAAATGCACTCACTTCATTTGAA
>XM_039791339.1
GTCTGGACTCTACAAGTTGGACTACGTCAACAGGATAGAGGAGAGCGTCCCAGCCCTCAGAGGAGCTGAGCACACAAACGTCCTCTAAATGTCCACACAAGGAGACGAGCTGCTGCGTCTCGGAGCGGGCTTTTCCTGCAGGTGGACATGTTTGGTCCGCGCGTAAAGACGCACTGAAGACGGACTACAAAACTTTGacgctttttttcttcttcttcttcttcttcttcctctttttcgaTCACCAAAAGAGCATCAGCGGCAGAAAAAGATGTTGGCGAGGAAAAGCATCATCCCGGAGGAGTTCGGTGTGCCGGGGCTCGCCTCCCGGATGCCCCGCAAGCCGGTGTTCAGGGACCGCGTGAACAAGGCGCGCTTCATCGCCAAAAACGGATCGTGCAACTTGGCGCACAAGAACATCCGCGAGCAGGGCCGGTTCTTGCAGGACGTGTTCACCACGCTGGTGGACCTGAAATGGCGCTTCACGCTGGTCATCTTCACCACGACGTTCGTCAGCAGCTGGCTGCTGTTCGCCATGAGCTGGTGGCTGGTGGCGTTCGCGCACGGGGACCTGGGCCAGGAACGGGAGCGGGAGTTGGATCTGGACCCGGAGCGGCACAACAGGACCCAGTGCGTCCCCCGAGACAAGTCGTTCACGTCAGCCTTCCTGTTCTCCATCGAGGTTCAGGTGACCATCGGCTTCGGAGGACGTATGATAACAGAGCACTGTCCGACCGCCATCACCGTCCTCATCATGCAGAACATCATCGGGCTCATCATCAACGCTGTCATGCTGGGTTGCATCTTCATGAAGACGGCGCAGTCAAACCGTCGGGCAGAGACGCTGATCTTCAGCCGCCACGCCGTGATCGCCGTCAGAAACAACTGCCTGTGTTTTATGATTCGTATCGGGGATCTCAGGAAGAGCATGATCATAGGAGCCACCGTCAGGTTACAGGTGGTGAGGAAGACGACCACGCCGGAGGGGGAGGTGATCCCCATCCATCAGATCGACGTCCAGACGGAGACGGCGTTGGCCAGCAACAGCCTGTTCCTCCTCGCCCCGCTCATCATCTGCCACATCATCGACAAAAACAGCCCGCTGTACGACTTGTCGGCCATGGAGCTGCAGTGCAGCGACCTGGAGGTGATCGTCATCCTGGAGGGCGTCGTGGAGACGACGGGGATCACCACGCAGGCCCGGACCTCCTACGTCTCCGACGAGATCCAGTGGGGTCACCGCTTCGTTCCCATAGTGACGGAGGAGGAGGGCGTGTACTCTGTGGACTACTCCAAGTTTGGTAATACAGTCAAGGTAACGACCCCACGCTGCAGCGCCAGAGAACTGGACGAGAAGCCGTCTATCCTAATCCAGACTCTGCAGAAGAGCGAGCTGTCGCACCAGAACTCGCTGAGGAAGCGTAACTCCATGCGGCGCAACAACTCCATGCGTAAAAACGCAGGAGGCAGCGGGGGTCTGCGCAGGAACAACTCGGGGCTCCTGACACCGAAAGTCCAGTTCTTCACCCCGACCGAGGGAGGCCAGAACCTGAACGCCGTTACCTGACATGAGGCCTGCCTCCCGATGGCTGCCCTGCTCCTCCTGGTGGCCAGGAGGATTATGGGCGTTGGTGTTTCTCCTCGTCTAACGGGACGCCTTCTCTTTCTGTTCCCTGCCTTATCTAGACTCCCGACACTTTTAATGTTACCTCATGTTCACACGCATGGAGTAATCTAGTTCTTATTTTTTAGAATGAACTGTTGCAGTTTATTTCTCCACACTCATAGCGCTGCCACAAACCAATCCATTTTTCTATCTTTTCATTATCAACAAAGCAATAATAAACTTTGGGCCTTTATGCCTGTTTTACCATTTCTAGGGAGATGTATTTTCTTATTGAATAAAGTCACAGTCTAACTACTTGTAGCGGTAGCTAGTGGCAATCAATCACTGTACTGACCatgtgtgtttttcactttattttgtcttttgtgttgTTGAGAATAAATGCACTCACTTCATTTGAA

Function

symbol description
kcnj8 Predicted to enable ATP-activated inward rectifier potassium channel activity. Predicted to be involved in potassium ion import across plasma membrane and regulation of ion transmembrane transport. Predicted to act upstream of or within potassium ion transport. Predicted to be located in membrane. Predicted to be integral component of membrane. Predicted to be active in plasma membrane. Used to study hypertrichotic osteochondrodysplasia Cantu type. Orthologous to human KCNJ8 (potassium inwardly rectifying channel subfamily J member 8).

NR:

description
PREDICTED: ATP-sensitive inward rectifier potassium channel 8

GO:

id name namespace
GO:0071805 potassium ion transmembrane transport biological_process
GO:0034765 regulation of ion transmembrane transport biological_process
GO:0016021 integral component of membrane cellular_component
GO:0015272 ATP-activated inward rectifier potassium channel activity molecular_function

KEGG:

id description
K05001 KCNJ8, KIR6.1; potassium inwardly-rectifying channel subfamily J member 8

RNA

RNA id representative length rna type GC content exon number start site end site
XM_039791338.1 True 2084 mRNA 0.54 7 5383034 5392940
XM_039791339.1 False 2028 mRNA 0.54 6 5383033 5392940

Neighbor

gene id symbol gene type direction distance location
LOC120553019 NA coding upstream 144689 5235150 ~ 5238344 (+)
LOC120553055 NA coding upstream 578791 4793287 ~ 4804242 (+)
dmtf1 NA coding upstream 633791 4734262 ~ 4749242 (+)
LOC120553359 v1ar1,LOC100695840,LOC101485029 coding upstream 686850 4688927 ~ 4696183 (+)
kics2 clg23h12orf66,LOC103364500 coding upstream 788891 4590710 ~ 4594142 (+)
echdc3 echdc3,LOC102797483 coding downstream 700 5393640 ~ 5399303 (+)
kin kin,LOC103372864 coding downstream 1120905 6513845 ~ 6519452 (+)
itih5 itih5 coding downstream 1142235 6535175 ~ 6553086 (+)
sfmbt2 sfmbt2 coding downstream 1186172 6579112 ~ 6636681 (+)
gnsa gns,LOC102788091 coding downstream 1326168 6719108 ~ 6734409 (+)
G226014 NA non-coding upstream 54664 5327996 ~ 5328369 (+)
G225983 NA non-coding upstream 178874 5186966 ~ 5204159 (+)
G225986 NA non-coding upstream 196550 5185667 ~ 5186483 (+)
G225985 NA non-coding upstream 197467 5183913 ~ 5185566 (+)
G225973 trhde,LOC103372213,LOC102788275 non-coding upstream 219260 5079479 ~ 5163773 (+)
G226027 NA non-coding downstream 151906 5544846 ~ 5552199 (+)
G226028 NA non-coding downstream 159313 5552253 ~ 5552473 (+)
G226029 NA non-coding downstream 159581 5552521 ~ 5553325 (+)
G226042 NA non-coding downstream 357188 5750128 ~ 5776433 (+)
G226085 NA non-coding downstream 526154 5919094 ~ 5919414 (+)
abcc9 abcc9,LOC107387088 other upstream 9396 5281258 ~ 5373637 (+)
G225894 NA other upstream 725064 4657444 ~ 4657969 (+)
LOC120553793 NA other upstream 1444079 3935674 ~ 3938954 (+)
LOC120553144 rap1b,LOC101070080,LOC100707998,LOC103368175,LOC102210937 other upstream 1541859 3814481 ~ 3841174 (+)
trnat-ugu_40 NA other upstream 1848361 3534600 ~ 3534672 (+)
prkcq prkcq,LOC102789446 other downstream 1267580 6660520 ~ 6686639 (+)
snrpf snrpf,LOC106576293 other downstream 1925577 7318517 ~ 7321189 (+)
amdhd1 amdhd1 other downstream 1930130 7323070 ~ 7332259 (+)
klhl42 klhl42 other downstream 1970385 7363325 ~ 7368216 (+)
nrip2 LOC102781986,LOC100711207,LOC102191975 other downstream 1977502 7370442 ~ 7400399 (+)

Expression


Co-expression Network