cerk (cerk,LOC103356477)


Basic Information

Item Value
gene id cerk
gene name cerk,LOC103356477
gene type coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053134.1
NCBI id CM020931.1
chromosome length 29109922
location 18274421 ~ 18313706 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>XM_039791349.1
TCTTTGTTTGAAGTCCCCCTCTTCTCCTGACACCACTGGCCGACCGACCGCGACCGACACACACTTCGTAAAAGCCGGACAGCGTTAAGTTAGGCGGGCCGTAACAAAGTTGAAATGACAGTCATCGGACGACAGCGTAATAACGACAAGTCTGAGCGATATAATGGAACCGCAAGCCAGATTACTATCCGCGATTCTTTTTCACAAGCACAGGCAGGTAGAAGTTGCTCTAAACCGCAGTGTCTTGGCGTGGAAGGAAATTGAGAGGAGCAGAAAACGAGCCCCTGGCATCAGTAACAGTGCTGAAACAGCACACAGCCATGCTGTTCAGGTGTGTGAAATAGTGGCTGTCCACAAGACCAAAGATGATGACCAAGACAGCAAAGAGACCAGGAAGAGTCAGAAAAAAGCAAAGCAGCACTCCCAGCTGTATCCCCATGCATTCACAGTTTCCTACATTAGAAGAACAAGGCAGCACCAGTGGCGGTGTGGTGATGTAACTTTCCACTCTGCCAATCAGGGACTCTGCGAGCAGTGGATCCATGTTATCAATGAGCAACTGTCATTACTCACCAACCGACCAAAGAGCCTTCTGGTGTACATCAATCCCTACGGAGGAAAGCGGCGCGGGAGGCGTATTTACGAGCAGAAGGTGGCTCCACTGTTTCGCCGTGCCTGCATCTTAGCAGACGTGATTGTTACAGAGCGAGCCAATCATGCCAGGGACCACTTGAAGACGGAGGCCAATCTAGATAAATATGACGGggtggtgtgtgtgggtggagaTGGGATGTTCAGTGAGATCCTGCATGGGTTAGTCACCAGGACCCAAACAGACAATAGAGTGGACCAGAACCAACCAGATGCTGAGTTGGTGCCGTGTTCTCTACAAATAGGGATCATTCCTGCCGGGTCCACTGATTGTATCTGCTTTGCCACAGTGGGAACCAACGATCCAGTTACTTCTGCTTTACACATCATTGTGGGTGATTCCCAGCCGATGGACGTGTGTTCAGTTCACCACAATGACCTCTTTCTTAGATACTCCGTCTCATTGCTTGGCTACGGTTTCTATGGTGATATACTGACAGACAGCGAGAGGAAGAGATGGCTGGGTCCTGCTAGATATGACCTGTCAGGGGTAAAAACCTTTCTGAGTCACAACTATTACGAAGGCAGCATCTCTTTCCTCCCCGCTGAGAACAACAAGGGGGACCCCAGGGATAAGCTGCAGTGTCGATCCGGGTGCCGCATCTGTCAGCCCAAGCCCTCATCAAAGGACACACAGTGGGAGATGTCAGAGGAGAAGGAAAAGTCTGATAAAGATGGCATGGGTGGTTGGAGTGTGATCCGTGGAAAGTTTATTGCCATTAACGCGGCCAGTATGAGCTGCGCGTGTCCCCGCAGTCCACAAGGCCTGTCGCCCTCTGCTCACCTCGCCGACGGCACCACGGACCTCATCCTCGTCAGGAAGTGCTCCCGTCTGAACTTCCTCAGACACCTCCTGCGACACACCAACAAAGAAGACCAGTTTGACCACTCGTTTGTGGAGGTCCACCGGGTAAGGAAGTTTCGTTTCCAGCCGCGGCAACATGAGCTGGAGTCACTAGAGGACCTGAGTGACAGTCCAAAGAAGACAGGCTTCAGGCCCATATGCTCCGCCCAAACAACCTGCAACTACAGCACCTCCCACAGCAGCTGGACCAGCGATGGGGAGATCCTGCCTCACGCTGCCATCCAAGTCAGTGTCCATGGCCAGTTGATCAGGCTGTTTGCCCGTGGTATCGAGGAGCAGCAGCAATGTGTGTTAGAAGATCCTTGTACACTGTGGGCCCTGGAGCAAAGCACATACCAGTCAGTGGACTGAGGACTGGACATTTAGCTGctagaaaacaaaaactgagtTGCACTTGGCAAGAGTTTCCTGGAAAAATACATGCATAGCATCAGTGTTAATCCCAAACGCTGGCGACCCATCCCTCCTTAGTGTATTTGCTTAAATGCAAGAAGTCCTCTCAATGCACAAGAAAGTGtgtttaaaatttattttttttaaagctgaaaAGGCTCCCATCGCTTGGCATTCAAAGAGAAAAAATTATGGCTAAAAAGTTACATTGCAGGATCTGTTACTGAAGAGATTCAGTTATGTCCTTGCTGCCATGTGGAGCTGTTATGTGCAAAATTGCCTCATGCAGCTTTAACTAACCCCAAAATATGATATGATACAGCTGCTAGTGCCAGCGCTGCCATATTCAAACCTcagtgtcagttttttttttttttatctgtactttttgaaaaatgGAAGATTTTGAAGCTCAAAAGGATCTCAAGCTGCCAGATGAAACAGCTGAACTGGACTGAGCTGGACTCAGCCGCAACAATCTGCGGAAGGTTTTTATCCTACCATGAAGGAGAACACAAATAGGATTTCTCCCTGTATAGCAAGGAGAGACAGCCAAGGAGATACTGCTTTGTTACAAGGATGAAGAAGAAAGGCCTGTGAAGTACACCGATGAACTGAAAAGACatataatgcaaaaaaaaaaaaaaaatttaatctgTGACCCAGGTGGAAGCAGATATGAGCCAAGGGCACTAATGAAAAGAGCTGAATACACTGCTAATACACTAACAGGACCCCGGTGAATTCTGGGTAATAAGGCAAAGTGGTTGCTAAGTGATTTGGTGTGTCTCAGCACTGCTGCGGTGCACCTGTGGCTCTGAGCTTTGTTCCTCTCTTGCCGAAAACTACTGACAGTTGAATCATCATCACCTGGGATTAGCCAGAATTATACATTGTTAACTTTATTCATGATAATCCATTGAAAATGTTCATAAAGCCAGACAGACCATTGGAAAATGCAATGATAAAACCCTTTTAAAAACCACATGCACAATAATATTACGTTataagttgtgtttgtgtgtgtctgtttaggGTTAAGTGTGTTTTCCACAATCCCTTTAGGGACGTGCAATCATTGgagtgtgtgcgcgcgtgtgtgcgtgcgtatgtatgtatttgtgaaGGTGCCAATGTGATGAGTTGGCTCTATCACAATTAGCCTCATGACTGCCATTTTGCAGATGCTCTCTCACTGCAGCCAAAACAATGCTAACACAAGCACCTATTGATgagcaaagacacacacacagacgcacacttTCTTCTATTATGCTTTTTCATATATTccttgtctatgtgtgtctaacTGTGTTAATACTGACTCTGAATGTCTGTTGTAATTCACCTTCAGTTCTCACTTTTGTCAGCATAGAGTATGTTCTTTCAAAGAACTGGATGCTTTTAAATcctctgtgcacacacactgaaatgtatgcagacacacacagaaactgtGAAAGTGAGAATTGTTTTCCGGTAGGCTATGGCCAAAAAGATTTGAAAAAGCTAAAGAATTTAGCAATTCATGAGTGACAATGCAAAGAAAGTTGAACTGGAATTTGAATTCCCACTATTTGGTGTAAGGACACACACGCTAGCACGCTAGGAAAACTAGCTTAGACTCATGGCTTCCACTAGGAAAGTTAAAGATAGTTAGCTTagcttgctaacattagcactgATTACCAGACATTGCTTCTTGTTTTTGCCATTTCAATACCTGCTGAGTGAGTACCTACTGTTATGATTTCTTTGCAAAAATTAATTCTAATTTCAGTTGTACTTGAGTTTGACTTTAATCTTGCTGCTCTGCATATTCGAGTAAACAAACTGTGATTAGATACATGAATGATTTATTCTCTGAAAATGCTCAATAAAGTCCTTTAAAATGTG

Function

symbol description
cerk Predicted to enable ceramide kinase activity. Predicted to be involved in ceramide metabolic process and phosphorylation. Orthologous to human CERK (ceramide kinase).

NR:

description
ceramide kinase-like isoform X1

GO:

id name namespace
GO:0007205 protein kinase C-activating G protein-coupled receptor signaling pathway biological_process
GO:0016310 phosphorylation biological_process
GO:0003951 NAD+ kinase activity molecular_function
GO:0004143 diacylglycerol kinase activity molecular_function

KEGG:

id description
K04715 CERK; ceramide kinase

RNA

RNA id representative length rna type GC content exon number start site end site
XM_039791349.1 True 3805 mRNA 0.46 13 18274421 18313706

Neighbor

gene id symbol gene type direction distance location
brd1a brd1,LOC101475857 coding upstream 672700 17584577 ~ 17601721 (+)
trnak-cuu_15 NA coding upstream 684258 17590091 ~ 17590163 (+)
alg12 alg12 coding upstream 697994 17570902 ~ 17576427 (+)
pim3 pim3 coding upstream 754904 17514539 ~ 17519517 (+)
il17rel NA coding upstream 925462 17331520 ~ 17348959 (+)
alg10 alg10,LOC108244056 coding downstream 222023 18535729 ~ 18539427 (+)
LOC120553631 NA coding downstream 417998 18731704 ~ 18738370 (+)
LOC120553744 LOC103369285 coding downstream 549166 18862872 ~ 18889356 (+)
LOC120553745 NA coding downstream 586909 18900615 ~ 18901342 (+)
LOC120553380 NA coding downstream 587844 18901550 ~ 18911762 (+)
LOC120553790 NA non-coding upstream 474171 17602192 ~ 17800250 (+)
LOC120553531 NA non-coding upstream 973401 17299723 ~ 17301020 (+)
G228392 NA non-coding upstream 1068781 17187926 ~ 17205640 (+)
G228384 NA non-coding upstream 1136070 17137271 ~ 17138351 (+)
LOC120553376 NA non-coding upstream 1153837 17119099 ~ 17120584 (+)
G228571 NA non-coding downstream 49544 18363250 ~ 18368382 (+)
G228581 NA non-coding downstream 115419 18429125 ~ 18465053 (+)
LOC120553397 NA non-coding downstream 168382 18482088 ~ 18485638 (+)
G228593 NA non-coding downstream 219595 18533301 ~ 18534349 (+)
G228605 NA non-coding downstream 291287 18604993 ~ 18663972 (+)
G228335 ahcyl2,LOC103371314,LOC107725924,LOC107656398 other upstream 1351598 16919663 ~ 16922823 (+)
morn2 morn2 other upstream 1357493 16880276 ~ 16916928 (+)
stmp1 NA other upstream 1406625 16866310 ~ 16867796 (+)
cald1a LOC102212027,LOC102781594,LOC102298269,LOC103382882,LOC106941466,LOC103156466,LOC101472471,LOC106916645,LOC106525550,LOC107395349,LOC103356441 other upstream 1443178 16771058 ~ 16831243 (+)
tmem168a LOC103368481 other upstream 1994360 16267136 ~ 16280061 (+)
srr srr,LOC105936311,LOC103459528 other downstream 216430 18530136 ~ 18533114 (+)
LOC120553630 muc19 other downstream 509126 18822832 ~ 18855314 (+)
LOC120553164 NA other downstream 1039277 19352983 ~ 19355551 (+)
G228784 LOC103359233,LOC104943309,LOC100709697 other downstream 1096784 19410490 ~ 19413704 (+)
LOC120553210 LOC104943308 other downstream 1318231 19631937 ~ 19839382 (+)

Expression


Co-expression Network